EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1055 bases
Position: chrJH422497.1:531582-532636
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	1	6
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	2	6
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	3	6
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	4	6
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	5	6
ENSNBRP00000030535	zf-C2H2	PF00096.26	4.5e-30	6	6
ENSNBRP00000030535	zf-met	PF12874.7	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031313	-	750	-	ENSNBRP00000030535	249 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000023229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023229	-	88	37.580	ENSNBRG00000011785	snai2	64	39.062
ENSNBRG00000023229	-	90	46.471	ENSNBRG00000001608	-	93	46.471
ENSNBRG00000023229	-	87	34.928	ENSNBRG00000020159	znf526	86	34.928
ENSNBRG00000023229	-	90	48.454	ENSNBRG00000006411	-	86	50.000
ENSNBRG00000023229	-	82	43.617	ENSNBRG00000008106	-	92	43.617
ENSNBRG00000023229	-	98	55.135	ENSNBRG00000024345	-	95	55.135
ENSNBRG00000023229	-	80	60.000	ENSNBRG00000016219	-	80	60.000
ENSNBRG00000023229	-	94	43.750	ENSNBRG00000003250	-	96	45.882
ENSNBRG00000023229	-	93	50.617	ENSNBRG00000006757	-	87	47.059
ENSNBRG00000023229	-	71	45.455	ENSNBRG00000019004	-	83	38.397
ENSNBRG00000023229	-	77	44.444	ENSNBRG00000009075	znf236	73	44.444
ENSNBRG00000023229	-	98	50.602	ENSNBRG00000024066	-	89	46.286
ENSNBRG00000023229	-	84	43.094	ENSNBRG00000005823	-	83	43.094
ENSNBRG00000023229	-	84	41.579	ENSNBRG00000005805	-	93	41.579
ENSNBRG00000023229	-	94	50.000	ENSNBRG00000007384	-	82	50.000
ENSNBRG00000023229	-	81	42.640	ENSNBRG00000024051	-	53	42.640
ENSNBRG00000023229	-	75	40.741	ENSNBRG00000012376	-	99	40.741
ENSNBRG00000023229	-	81	42.484	ENSNBRG00000008223	-	82	42.484
ENSNBRG00000023229	-	79	44.000	ENSNBRG00000019550	znf341	51	32.212
ENSNBRG00000023229	-	94	52.747	ENSNBRG00000006112	-	59	52.747
ENSNBRG00000023229	-	76	44.330	ENSNBRG00000024294	-	62	44.330
ENSNBRG00000023229	-	86	42.697	ENSNBRG00000024293	-	90	42.697
ENSNBRG00000023229	-	78	51.534	ENSNBRG00000023956	-	52	51.534
ENSNBRG00000023229	-	96	40.984	ENSNBRG00000016564	-	81	40.984
ENSNBRG00000023229	-	90	47.134	ENSNBRG00000005849	-	89	47.134
ENSNBRG00000023229	-	99	53.226	ENSNBRG00000004822	-	76	68.750
ENSNBRG00000023229	-	72	64.706	ENSNBRG00000010405	-	83	64.706
ENSNBRG00000023229	-	85	45.349	ENSNBRG00000005796	-	93	45.349
ENSNBRG00000023229	-	83	43.350	ENSNBRG00000021355	-	90	43.350
ENSNBRG00000023229	-	90	43.750	ENSNBRG00000008123	-	83	43.750
ENSNBRG00000023229	-	78	57.447	ENSNBRG00000016666	-	96	47.059
ENSNBRG00000023229	-	77	56.989	ENSNBRG00000016234	-	63	56.989
ENSNBRG00000023229	-	88	40.426	ENSNBRG00000008827	znf319b	97	40.426
ENSNBRG00000023229	-	80	53.488	ENSNBRG00000003000	-	80	53.488
ENSNBRG00000023229	-	78	46.667	ENSNBRG00000002542	-	82	46.667
ENSNBRG00000023229	-	75	51.899	ENSNBRG00000004381	-	74	51.899
ENSNBRG00000023229	-	100	45.181	ENSNBRG00000001641	-	76	49.351
ENSNBRG00000023229	-	94	55.556	ENSNBRG00000014088	-	99	56.989
ENSNBRG00000023229	-	94	54.762	ENSNBRG00000015873	-	94	56.322
ENSNBRG00000023229	-	94	65.116	ENSNBRG00000003124	-	99	59.677
ENSNBRG00000023229	-	80	46.632	ENSNBRG00000016603	-	88	46.632
ENSNBRG00000023229	-	92	38.095	ENSNBRG00000004976	prdm5	68	38.095
ENSNBRG00000023229	-	78	47.222	ENSNBRG00000004557	-	87	47.222
ENSNBRG00000023229	-	75	42.254	ENSNBRG00000013983	scrt1b	51	42.254
ENSNBRG00000023229	-	90	39.726	ENSNBRG00000022534	znf646	69	39.726
ENSNBRG00000023229	-	75	45.349	ENSNBRG00000001834	-	99	45.349
ENSNBRG00000023229	-	95	53.846	ENSNBRG00000007311	-	97	56.684
ENSNBRG00000023229	-	82	62.637	ENSNBRG00000006125	-	91	62.637
ENSNBRG00000023229	-	81	42.079	ENSNBRG00000021237	-	89	42.079
ENSNBRG00000023229	-	98	57.542	ENSNBRG00000016282	-	98	55.435
ENSNBRG00000023229	-	80	44.848	ENSNBRG00000016582	-	88	44.848
ENSNBRG00000023229	-	87	56.725	ENSNBRG00000019770	-	87	56.481
ENSNBRG00000023229	-	80	46.043	ENSNBRG00000000708	-	87	46.043
ENSNBRG00000023229	-	76	42.991	ENSNBRG00000007276	-	50	42.991
ENSNBRG00000023229	-	79	40.940	ENSNBRG00000009811	-	95	40.940
ENSNBRG00000023229	-	93	47.541	ENSNBRG00000007221	scrt2	64	47.541
ENSNBRG00000023229	-	81	56.410	ENSNBRG00000000793	-	99	56.410
ENSNBRG00000023229	-	98	59.140	ENSNBRG00000000960	-	99	56.345
ENSNBRG00000023229	-	94	52.193	ENSNBRG00000015652	-	96	52.193
ENSNBRG00000023229	-	96	42.105	ENSNBRG00000021967	-	72	42.105
ENSNBRG00000023229	-	79	53.889	ENSNBRG00000024344	-	72	53.889
ENSNBRG00000023229	-	78	43.827	ENSNBRG00000016577	si:dkey-182i3.9	89	45.399
ENSNBRG00000023229	-	75	51.678	ENSNBRG00000024086	-	65	51.678
ENSNBRG00000023229	-	75	50.318	ENSNBRG00000021375	-	50	50.318
ENSNBRG00000023229	-	94	57.143	ENSNBRG00000000523	-	83	57.143
ENSNBRG00000023229	-	78	51.852	ENSNBRG00000021247	-	50	51.852
ENSNBRG00000023229	-	97	45.699	ENSNBRG00000024179	-	75	45.699
ENSNBRG00000023229	-	94	46.154	ENSNBRG00000010987	-	83	46.154
ENSNBRG00000023229	-	94	51.630	ENSNBRG00000000321	-	99	51.630
ENSNBRG00000023229	-	91	47.541	ENSNBRG00000014882	-	64	47.541
ENSNBRG00000023229	-	89	47.619	ENSNBRG00000023960	-	63	47.619
ENSNBRG00000023229	-	91	44.571	ENSNBRG00000001761	-	59	44.571
ENSNBRG00000023229	-	75	47.436	ENSNBRG00000024020	-	55	47.436
ENSNBRG00000023229	-	80	40.719	ENSNBRG00000009279	-	88	40.719
ENSNBRG00000023229	-	94	52.792	ENSNBRG00000002902	-	97	51.648
ENSNBRG00000023229	-	99	58.896	ENSNBRG00000001163	-	97	58.896
ENSNBRG00000023229	-	96	44.262	ENSNBRG00000016550	-	89	44.262
ENSNBRG00000023229	-	99	54.348	ENSNBRG00000016169	-	80	54.348
ENSNBRG00000023229	-	86	50.228	ENSNBRG00000013501	-	98	50.228
ENSNBRG00000023229	-	94	53.226	ENSNBRG00000000577	-	94	54.348
ENSNBRG00000023229	-	80	50.568	ENSNBRG00000007602	-	85	50.568
ENSNBRG00000023229	-	94	50.538	ENSNBRG00000010194	-	96	50.538
ENSNBRG00000023229	-	89	52.778	ENSNBRG00000024019	-	96	52.778
ENSNBRG00000023229	-	89	52.151	ENSNBRG00000024014	-	71	52.151
ENSNBRG00000023229	-	67	40.594	ENSNBRG00000014403	-	56	39.806
ENSNBRG00000023229	-	83	41.406	ENSNBRG00000009128	-	54	45.652
ENSNBRG00000023229	-	76	51.678	ENSNBRG00000022241	-	91	51.678
ENSNBRG00000023229	-	75	42.222	ENSNBRG00000010351	-	91	42.222
ENSNBRG00000023229	-	82	45.109	ENSNBRG00000000305	-	78	45.109
ENSNBRG00000023229	-	80	52.874	ENSNBRG00000024046	-	53	52.874
ENSNBRG00000023229	-	94	53.289	ENSNBRG00000024048	-	85	53.289
ENSNBRG00000023229	-	76	46.939	ENSNBRG00000018718	zbtb47b	67	46.939
ENSNBRG00000023229	-	76	38.710	ENSNBRG00000005175	zbtb41	63	38.710
ENSNBRG00000023229	-	79	47.959	ENSNBRG00000021998	-	57	47.959
ENSNBRG00000023229	-	88	40.120	ENSNBRG00000015442	ZNF319	96	40.120
ENSNBRG00000023229	-	93	44.382	ENSNBRG00000004523	-	93	44.382
ENSNBRG00000023229	-	88	51.064	ENSNBRG00000013583	-	94	51.064
ENSNBRG00000023229	-	98	49.767	ENSNBRG00000019481	-	92	55.556
ENSNBRG00000023229	-	92	52.941	ENSNBRG00000001813	-	67	52.941
ENSNBRG00000023229	-	75	44.595	ENSNBRG00000002946	-	50	44.595
ENSNBRG00000023229	-	89	41.860	ENSNBRG00000009815	-	83	41.860
ENSNBRG00000023229	-	80	49.375	ENSNBRG00000024054	-	66	49.375
ENSNBRG00000023229	-	92	45.862	ENSNBRG00000000492	-	95	45.862
ENSNBRG00000023229	-	76	45.509	ENSNBRG00000012391	gfi1b	58	45.509
ENSNBRG00000023229	-	88	45.745	ENSNBRG00000004723	-	94	45.745
ENSNBRG00000023229	-	81	51.256	ENSNBRG00000013604	-	93	51.256
ENSNBRG00000023229	-	85	55.801	ENSNBRG00000024354	-	95	55.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023229	-	94	59.341	ENSACIG00000017647	-	97	59.669	Amphilophus_citrinellus
ENSNBRG00000023229	-	98	57.065	ENSAOCG00000003277	-	85	57.065	Amphiprion_ocellaris
ENSNBRG00000023229	-	99	42.708	ENSAPEG00000016601	-	88	42.708	Amphiprion_percula
ENSNBRG00000023229	-	99	73.520	ENSACLG00000005615	-	80	73.520	Astatotilapia_calliptera
ENSNBRG00000023229	-	82	45.098	ENSACLG00000015989	-	87	45.503	Astatotilapia_calliptera
ENSNBRG00000023229	-	85	45.238	ENSCSAVG00000002179	-	99	45.238	Ciona_savignyi
ENSNBRG00000023229	-	84	50.292	ENSCGRG00001004047	-	71	50.292	Cricetulus_griseus_chok1gshd
ENSNBRG00000023229	-	75	47.581	ENSCSEG00000001771	-	60	47.581	Cynoglossus_semilaevis
ENSNBRG00000023229	-	88	47.340	ENSEBUG00000002537	-	87	47.340	Eptatretus_burgeri
ENSNBRG00000023229	-	85	50.267	ENSEBUG00000011244	-	86	50.267	Eptatretus_burgeri
ENSNBRG00000023229	-	80	46.875	ENSEBUG00000002589	-	74	46.875	Eptatretus_burgeri
ENSNBRG00000023229	-	94	53.982	ENSHBUG00000012758	-	99	54.878	Haplochromis_burtoni
ENSNBRG00000023229	-	82	44.920	ENSHBUG00000016546	-	64	44.920	Haplochromis_burtoni
ENSNBRG00000023229	-	99	73.520	ENSHBUG00000020071	-	80	73.520	Haplochromis_burtoni
ENSNBRG00000023229	-	76	44.271	ENSMZEG00005020731	-	83	44.271	Maylandia_zebra
ENSNBRG00000023229	-	82	44.920	ENSMZEG00005027844	-	64	44.920	Maylandia_zebra
ENSNBRG00000023229	-	85	53.691	MGP_CAROLIEiJ_G0029612	Zfp141	56	53.691	Mus_caroli
ENSNBRG00000023229	-	78	53.906	ENSMUSG00000092416	Zfp141	56	53.906	Mus_musculus
ENSNBRG00000023229	-	93	53.906	MGP_SPRETEiJ_G0030709	-	83	53.906	Mus_spretus
ENSNBRG00000023229	-	83	44.444	ENSONIG00000014100	-	86	44.444	Oreochromis_niloticus
ENSNBRG00000023229	-	84	48.649	ENSONIG00000006238	-	99	48.649	Oreochromis_niloticus
ENSNBRG00000023229	-	80	43.889	ENSONIG00000018188	-	100	43.889	Oreochromis_niloticus
ENSNBRG00000023229	-	84	42.162	ENSPFOG00000007708	-	99	42.162	Poecilia_formosa
ENSNBRG00000023229	-	92	54.717	ENSPLAG00000010448	-	74	48.128	Poecilia_latipinna
ENSNBRG00000023229	-	90	47.340	ENSPCAG00000001613	-	82	50.538	Procavia_capensis
ENSNBRG00000023229	-	82	47.059	ENSPNYG00000005671	-	73	47.059	Pundamilia_nyererei
ENSNBRG00000023229	-	84	56.522	ENSPNAG00000015131	-	88	56.522	Pygocentrus_nattereri
ENSNBRG00000023229	-	98	54.494	ENSSFOG00015000652	ZNF775	95	54.494	Scleropages_formosus
ENSNBRG00000023229	-	98	56.364	ENSSDUG00000005401	-	97	58.989	Seriola_dumerili
ENSNBRG00000023229	-	80	46.448	ENSSDUG00000020595	-	82	45.294	Seriola_dumerili
ENSNBRG00000023229	-	80	47.024	ENSSDUG00000004089	-	92	51.136	Seriola_dumerili
ENSNBRG00000023229	-	80	52.128	ENSSPUG00000007064	-	98	50.829	Sphenodon_punctatus
ENSNBRG00000023229	-	81	42.857	ENSSPAG00000009587	-	99	50.289	Stegastes_partitus
ENSNBRG00000023229	-	85	47.849	ENSTTRG00000004891	-	54	47.929	Tursiops_truncatus
ENSNBRG00000023229	-	80	49.708	ENSXETG00000030967	-	94	49.708	Xenopus_tropicalis
ENSNBRG00000023229	-	78	45.714	ENSXETG00000015125	-	95	45.714	Xenopus_tropicalis