EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000023403 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 35543 bases
Position: chrJH422389.1:354585-390127
Accession: 102779309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030776	RRM_1	PF00076.22	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031560	-	2286	XM_006804126	ENSNBRP00000030776	761 (aa)	XP_006804189	-

Gene Model

Click here to download ENSNBRG00000023403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023403	ppargc1a	98	98.381	ENSAPOG00000018632	ppargc1a	100	87.799	Acanthochromis_polyacanthus
ENSNBRG00000023403	ppargc1a	100	84.557	ENSACIG00000009732	ppargc1a	100	85.696	Amphilophus_citrinellus
ENSNBRG00000023403	ppargc1a	98	98.381	ENSAOCG00000006754	ppargc1a	100	89.100	Amphiprion_ocellaris
ENSNBRG00000023403	ppargc1a	100	85.697	ENSAPEG00000022574	ppargc1a	100	85.697	Amphiprion_percula
ENSNBRG00000023403	ppargc1a	97	96.356	ENSATEG00000016702	ppargc1a	100	84.586	Anabas_testudineus
ENSNBRG00000023403	ppargc1a	100	99.216	ENSACLG00000001002	ppargc1a	100	99.216	Astatotilapia_calliptera
ENSNBRG00000023403	ppargc1a	93	85.714	ENSAMXG00000002461	ppargc1a	89	89.349	Astyanax_mexicanus
ENSNBRG00000023403	ppargc1a	74	52.985	ENSCPBG00000007891	PPARGC1B	53	52.985	Chrysemys_picta_bellii
ENSNBRG00000023403	ppargc1a	99	95.951	ENSCSEG00000006884	ppargc1a	100	78.967	Cynoglossus_semilaevis
ENSNBRG00000023403	ppargc1a	68	75.843	ENSCVAG00000016547	ppargc1a	100	64.706	Cyprinodon_variegatus
ENSNBRG00000023403	ppargc1a	92	89.941	ENSDARG00000067829	ppargc1a	88	89.941	Danio_rerio
ENSNBRG00000023403	ppargc1a	98	53.837	ENSECAG00000009164	PPARGC1A	64	52.696	Equus_caballus
ENSNBRG00000023403	ppargc1a	74	92.308	ENSELUG00000017027	ppargc1a	100	60.045	Esox_lucius
ENSNBRG00000023403	ppargc1a	99	95.851	ENSFHEG00000021990	ppargc1a	100	81.037	Fundulus_heteroclitus
ENSNBRG00000023403	ppargc1a	98	54.227	ENSGALG00000042851	PPARGC1A	67	53.403	Gallus_gallus
ENSNBRG00000023403	ppargc1a	99	95.021	ENSGAFG00000015514	ppargc1a	100	81.865	Gambusia_affinis
ENSNBRG00000023403	ppargc1a	99	53.763	ENSGAGG00000007043	PPARGC1A	66	51.323	Gopherus_agassizii
ENSNBRG00000023403	ppargc1a	73	52.555	ENSGAGG00000012870	PPARGC1B	51	52.555	Gopherus_agassizii
ENSNBRG00000023403	ppargc1a	100	99.595	ENSHBUG00000005269	ppargc1a	100	97.911	Haplochromis_burtoni
ENSNBRG00000023403	ppargc1a	57	50.360	ENSHGLG00000005967	PPARGC1B	51	50.360	Heterocephalus_glaber_female
ENSNBRG00000023403	ppargc1a	96	93.117	ENSHCOG00000014886	ppargc1a	100	66.918	Hippocampus_comes
ENSNBRG00000023403	ppargc1a	91	94.737	ENSIPUG00000020313	ppargc1a	60	94.737	Ictalurus_punctatus
ENSNBRG00000023403	ppargc1a	100	81.969	ENSKMAG00000005390	ppargc1a	100	82.097	Kryptolebias_marmoratus
ENSNBRG00000023403	ppargc1a	98	96.266	ENSLBEG00000019562	ppargc1a	100	80.952	Labrus_bergylta
ENSNBRG00000023403	ppargc1a	71	51.658	ENSLACG00000014054	PPARGC1A	66	51.254	Latimeria_chalumnae
ENSNBRG00000023403	ppargc1a	66	45.113	ENSLOCG00000012195	ppargc1b	56	45.113	Lepisosteus_oculatus
ENSNBRG00000023403	ppargc1a	94	90.110	ENSLOCG00000012350	ppargc1a	87	93.491	Lepisosteus_oculatus
ENSNBRG00000023403	ppargc1a	97	97.561	ENSMAMG00000005531	ppargc1a	92	97.166	Mastacembelus_armatus
ENSNBRG00000023403	ppargc1a	100	99.190	ENSMZEG00005001739	ppargc1a	70	99.190	Maylandia_zebra
ENSNBRG00000023403	ppargc1a	74	52.605	ENSMGAG00000012485	PPARGC1A	69	52.993	Meleagris_gallopavo
ENSNBRG00000023403	ppargc1a	99	95.161	ENSMMOG00000011847	ppargc1a	68	95.161	Mola_mola
ENSNBRG00000023403	ppargc1a	99	95.142	ENSMALG00000004625	ppargc1a	58	95.142	Monopterus_albus
ENSNBRG00000023403	ppargc1a	74	52.632	ENSMUSG00000029167	Ppargc1a	67	52.496	Mus_musculus
ENSNBRG00000023403	ppargc1a	74	52.718	MGP_SPRETEiJ_G0028208	Ppargc1a	67	52.586	Mus_spretus
ENSNBRG00000023403	ppargc1a	71	50.676	ENSNLEG00000010193	PPARGC1B	53	50.676	Nomascus_leucogenys
ENSNBRG00000023403	ppargc1a	98	95.951	ENSORLG00000004788	ppargc1a	100	83.825	Oryzias_latipes
ENSNBRG00000023403	ppargc1a	99	95.951	ENSORLG00020014690	ppargc1a	100	80.941	Oryzias_latipes_hni
ENSNBRG00000023403	ppargc1a	98	95.547	ENSORLG00015012206	ppargc1a	100	82.025	Oryzias_latipes_hsok
ENSNBRG00000023403	ppargc1a	100	84.813	ENSOMEG00000000670	ppargc1a	100	84.813	Oryzias_melastigma
ENSNBRG00000023403	ppargc1a	69	56.489	ENSPTRG00000017403	PPARGC1B	50	56.489	Pan_troglodytes
ENSNBRG00000023403	ppargc1a	97	72.294	ENSPKIG00000002531	ppargc1a	63	80.000	Paramormyrops_kingsleyae
ENSNBRG00000023403	ppargc1a	75	48.101	ENSPSIG00000008358	PPARGC1B	54	48.101	Pelodiscus_sinensis
ENSNBRG00000023403	ppargc1a	100	69.012	ENSPMGG00000019204	ppargc1a	100	69.511	Periophthalmus_magnuspinnatus
ENSNBRG00000023403	ppargc1a	74	53.115	ENSPEMG00000010892	Ppargc1a	67	52.668	Peromyscus_maniculatus_bairdii
ENSNBRG00000023403	ppargc1a	96	96.250	ENSPFOG00000001263	ppargc1a	91	77.849	Poecilia_formosa
ENSNBRG00000023403	ppargc1a	100	78.508	ENSPLAG00000002827	ppargc1a	100	79.445	Poecilia_latipinna
ENSNBRG00000023403	ppargc1a	99	95.833	ENSPMEG00000000720	ppargc1a	88	94.737	Poecilia_mexicana
ENSNBRG00000023403	ppargc1a	98	96.266	ENSPREG00000019171	ppargc1a	100	81.445	Poecilia_reticulata
ENSNBRG00000023403	ppargc1a	100	99.595	ENSPNYG00000006846	ppargc1a	100	97.406	Pundamilia_nyererei
ENSNBRG00000023403	ppargc1a	97	86.122	ENSPNAG00000010393	ppargc1a	89	89.941	Pygocentrus_nattereri
ENSNBRG00000023403	ppargc1a	100	51.821	ENSSFOG00015018522	ppargc1a	90	74.534	Scleropages_formosus
ENSNBRG00000023403	ppargc1a	90	81.065	ENSSFOG00015001633	ppargc1a	73	81.065	Scleropages_formosus
ENSNBRG00000023403	ppargc1a	98	94.737	ENSSMAG00000011571	ppargc1a	56	95.858	Scophthalmus_maximus
ENSNBRG00000023403	ppargc1a	100	81.101	ENSSDUG00000007408	ppargc1a	100	81.529	Seriola_dumerili
ENSNBRG00000023403	ppargc1a	100	75.717	ENSSLDG00000006987	ppargc1a	94	82.573	Seriola_lalandi_dorsalis
ENSNBRG00000023403	ppargc1a	91	80.000	ENSSARG00000000575	PPARGC1A	83	80.000	Sorex_araneus
ENSNBRG00000023403	ppargc1a	96	97.845	ENSSPAG00000023514	ppargc1a	100	88.718	Stegastes_partitus
ENSNBRG00000023403	ppargc1a	89	91.329	ENSTRUG00000007210	ppargc1a	92	72.139	Takifugu_rubripes
ENSNBRG00000023403	ppargc1a	68	57.252	ENSTTRG00000008430	PPARGC1B	51	57.252	Tursiops_truncatus
ENSNBRG00000023403	ppargc1a	98	95.833	ENSXCOG00000004835	ppargc1a	96	78.732	Xiphophorus_couchianus
ENSNBRG00000023403	ppargc1a	99	95.417	ENSXMAG00000007748	ppargc1a	64	94.332	Xiphophorus_maculatus