EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000023606 (Gene tree)
Gene ID: 102784313
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: CCA tRNA nucleotidyltransferase 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5848 bases
Position: chrJH422279.1:13283408-13289255
Accession: 102784313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031076	PolyA_pol	PF01743.20	5.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031865	-	1125	XM_006784828	ENSNBRP00000031076	347 (aa)	XP_006784891	-

Gene Model

Click here to download ENSNBRG00000023606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023606	trnt1	99	66.957	ENSG00000072756	TRNT1	79	66.957	Homo_sapiens
ENSNBRG00000023606	trnt1	99	85.838	ENSAPOG00000013687	trnt1	81	85.838	Acanthochromis_polyacanthus
ENSNBRG00000023606	trnt1	99	66.859	ENSAMEG00000014520	TRNT1	80	66.859	Ailuropoda_melanoleuca
ENSNBRG00000023606	trnt1	99	93.642	ENSACIG00000021706	trnt1	81	93.642	Amphilophus_citrinellus
ENSNBRG00000023606	trnt1	99	88.150	ENSAOCG00000024612	trnt1	81	88.150	Amphiprion_ocellaris
ENSNBRG00000023606	trnt1	99	80.347	ENSAPEG00000022627	trnt1	79	80.347	Amphiprion_percula
ENSNBRG00000023606	trnt1	93	90.093	ENSATEG00000008928	trnt1	80	90.093	Anabas_testudineus
ENSNBRG00000023606	trnt1	93	64.396	ENSAPLG00000004258	TRNT1	80	64.396	Anas_platyrhynchos
ENSNBRG00000023606	trnt1	95	64.438	ENSACAG00000005657	TRNT1	75	64.438	Anolis_carolinensis
ENSNBRG00000023606	trnt1	99	66.763	ENSANAG00000024802	TRNT1	79	66.763	Aotus_nancymaae
ENSNBRG00000023606	trnt1	99	97.977	ENSACLG00000022227	trnt1	81	97.977	Astatotilapia_calliptera
ENSNBRG00000023606	trnt1	99	76.791	ENSAMXG00000003960	trnt1	81	76.791	Astyanax_mexicanus
ENSNBRG00000023606	trnt1	99	65.797	ENSBTAG00000019534	TRNT1	79	65.797	Bos_taurus
ENSNBRG00000023606	trnt1	89	49.841	WBGene00010089	hpo-31	72	49.841	Caenorhabditis_elegans
ENSNBRG00000023606	trnt1	99	67.052	ENSCJAG00000015466	TRNT1	79	67.052	Callithrix_jacchus
ENSNBRG00000023606	trnt1	97	68.343	ENSCAFG00000005985	TRNT1	78	68.343	Canis_familiaris
ENSNBRG00000023606	trnt1	97	68.343	ENSCAFG00020014746	TRNT1	78	68.343	Canis_lupus_dingo
ENSNBRG00000023606	trnt1	99	66.667	ENSCHIG00000007030	TRNT1	79	66.667	Capra_hircus
ENSNBRG00000023606	trnt1	99	67.246	ENSTSYG00000013390	TRNT1	79	67.246	Carlito_syrichta
ENSNBRG00000023606	trnt1	85	51.351	ENSCAPG00000006891	TRNT1	75	51.351	Cavia_aperea
ENSNBRG00000023606	trnt1	99	66.957	ENSCPOG00000007849	TRNT1	95	67.717	Cavia_porcellus
ENSNBRG00000023606	trnt1	95	66.766	ENSCCAG00000002919	TRNT1	80	66.766	Cebus_capucinus
ENSNBRG00000023606	trnt1	99	67.919	ENSCATG00000031985	TRNT1	79	67.919	Cercocebus_atys
ENSNBRG00000023606	trnt1	99	67.246	ENSCLAG00000005186	TRNT1	92	75.510	Chinchilla_lanigera
ENSNBRG00000023606	trnt1	99	67.919	ENSCSAG00000011052	TRNT1	79	67.919	Chlorocebus_sabaeus
ENSNBRG00000023606	trnt1	80	73.846	ENSCHOG00000005712	TRNT1	64	73.846	Choloepus_hoffmanni
ENSNBRG00000023606	trnt1	95	67.988	ENSCPBG00000017636	TRNT1	75	67.988	Chrysemys_picta_bellii
ENSNBRG00000023606	trnt1	93	43.344	ENSCING00000007069	-	79	43.344	Ciona_intestinalis
ENSNBRG00000023606	trnt1	86	46.000	ENSCSAVG00000007494	-	71	46.000	Ciona_savignyi
ENSNBRG00000023606	trnt1	99	68.208	ENSCANG00000039030	TRNT1	79	68.208	Colobus_angolensis_palliatus
ENSNBRG00000023606	trnt1	99	66.087	ENSCGRG00001009998	Trnt1	79	66.087	Cricetulus_griseus_chok1gshd
ENSNBRG00000023606	trnt1	99	66.087	ENSCGRG00000013410	Trnt1	94	74.372	Cricetulus_griseus_crigri
ENSNBRG00000023606	trnt1	99	82.948	ENSCSEG00000008157	trnt1	81	82.948	Cynoglossus_semilaevis
ENSNBRG00000023606	trnt1	99	85.838	ENSCVAG00000019770	trnt1	81	85.838	Cyprinodon_variegatus
ENSNBRG00000023606	trnt1	99	78.797	ENSDARG00000075297	trnt1	81	78.797	Danio_rerio
ENSNBRG00000023606	trnt1	99	67.536	ENSDNOG00000008837	TRNT1	79	67.536	Dasypus_novemcinctus
ENSNBRG00000023606	trnt1	99	66.000	ENSDORG00000014035	Trnt1	81	66.000	Dipodomys_ordii
ENSNBRG00000023606	trnt1	87	55.519	FBgn0037369	CG2100	64	55.519	Drosophila_melanogaster
ENSNBRG00000023606	trnt1	72	71.888	ENSETEG00000018177	TRNT1	100	71.888	Echinops_telfairi
ENSNBRG00000023606	trnt1	99	61.207	ENSEBUG00000012779	-	80	61.207	Eptatretus_burgeri
ENSNBRG00000023606	trnt1	99	68.116	ENSEASG00005003577	TRNT1	79	68.116	Equus_asinus_asinus
ENSNBRG00000023606	trnt1	99	68.406	ENSECAG00000014420	TRNT1	84	68.406	Equus_caballus
ENSNBRG00000023606	trnt1	99	67.826	ENSEEUG00000009567	TRNT1	79	67.826	Erinaceus_europaeus
ENSNBRG00000023606	trnt1	99	79.598	ENSELUG00000003802	trnt1	81	79.598	Esox_lucius
ENSNBRG00000023606	trnt1	99	66.957	ENSFCAG00000026805	TRNT1	79	66.957	Felis_catus
ENSNBRG00000023606	trnt1	87	67.987	ENSFALG00000013539	TRNT1	79	67.987	Ficedula_albicollis
ENSNBRG00000023606	trnt1	99	66.377	ENSFDAG00000018412	TRNT1	91	73.469	Fukomys_damarensis
ENSNBRG00000023606	trnt1	99	84.682	ENSFHEG00000019294	trnt1	81	84.682	Fundulus_heteroclitus
ENSNBRG00000023606	trnt1	99	80.692	ENSGMOG00000007460	trnt1	81	80.692	Gadus_morhua
ENSNBRG00000023606	trnt1	99	64.348	ENSGALG00000017368	TRNT1	78	64.348	Gallus_gallus
ENSNBRG00000023606	trnt1	99	81.792	ENSGAFG00000008647	trnt1	81	81.792	Gambusia_affinis
ENSNBRG00000023606	trnt1	99	85.549	ENSGACG00000011903	trnt1	81	85.549	Gasterosteus_aculeatus
ENSNBRG00000023606	trnt1	99	64.525	ENSGAGG00000020942	TRNT1	81	64.525	Gopherus_agassizii
ENSNBRG00000023606	trnt1	99	67.246	ENSGGOG00000015286	TRNT1	79	67.246	Gorilla_gorilla
ENSNBRG00000023606	trnt1	99	98.266	ENSHBUG00000002797	trnt1	81	98.266	Haplochromis_burtoni
ENSNBRG00000023606	trnt1	99	66.667	ENSHGLG00000003649	TRNT1	79	66.667	Heterocephalus_glaber_female
ENSNBRG00000023606	trnt1	99	62.717	ENSHGLG00000000221	-	78	62.717	Heterocephalus_glaber_female
ENSNBRG00000023606	trnt1	99	65.217	ENSHGLG00100016421	TRNT1	91	68.718	Heterocephalus_glaber_male
ENSNBRG00000023606	trnt1	99	78.324	ENSHCOG00000010618	trnt1	81	78.324	Hippocampus_comes
ENSNBRG00000023606	trnt1	99	76.791	ENSIPUG00000000971	trnt1	81	76.791	Ictalurus_punctatus
ENSNBRG00000023606	trnt1	99	67.143	ENSSTOG00000000150	TRNT1	97	73.632	Ictidomys_tridecemlineatus
ENSNBRG00000023606	trnt1	99	66.185	ENSJJAG00000018561	Trnt1	80	66.185	Jaculus_jaculus
ENSNBRG00000023606	trnt1	99	86.705	ENSKMAG00000011307	trnt1	81	86.705	Kryptolebias_marmoratus
ENSNBRG00000023606	trnt1	99	79.769	ENSLBEG00000019457	trnt1	81	79.769	Labrus_bergylta
ENSNBRG00000023606	trnt1	95	72.256	ENSLACG00000013227	TRNT1	76	72.256	Latimeria_chalumnae
ENSNBRG00000023606	trnt1	99	74.212	ENSLOCG00000011105	trnt1	80	74.212	Lepisosteus_oculatus
ENSNBRG00000023606	trnt1	99	66.667	ENSLAFG00000023191	TRNT1	79	66.667	Loxodonta_africana
ENSNBRG00000023606	trnt1	99	67.919	ENSMFAG00000045113	TRNT1	79	67.919	Macaca_fascicularis
ENSNBRG00000023606	trnt1	99	67.919	ENSMMUG00000017983	TRNT1	79	67.919	Macaca_mulatta
ENSNBRG00000023606	trnt1	99	67.919	ENSMNEG00000037805	TRNT1	79	67.919	Macaca_nemestrina
ENSNBRG00000023606	trnt1	87	70.199	ENSMLEG00000033671	TRNT1	79	70.199	Mandrillus_leucophaeus
ENSNBRG00000023606	trnt1	99	86.994	ENSMAMG00000023401	trnt1	81	86.994	Mastacembelus_armatus
ENSNBRG00000023606	trnt1	99	97.977	ENSMZEG00005009141	trnt1	81	97.977	Maylandia_zebra
ENSNBRG00000023606	trnt1	69	63.598	ENSMGAG00000009971	TRNT1	74	63.598	Meleagris_gallopavo
ENSNBRG00000023606	trnt1	99	65.507	ENSMAUG00000020707	Trnt1	79	65.507	Mesocricetus_auratus
ENSNBRG00000023606	trnt1	99	67.246	ENSMICG00000016615	TRNT1	79	67.246	Microcebus_murinus
ENSNBRG00000023606	trnt1	99	66.377	ENSMOCG00000004539	Trnt1	79	66.377	Microtus_ochrogaster
ENSNBRG00000023606	trnt1	99	85.549	ENSMMOG00000010742	trnt1	81	85.549	Mola_mola
ENSNBRG00000023606	trnt1	96	65.868	ENSMODG00000004368	TRNT1	77	65.868	Monodelphis_domestica
ENSNBRG00000023606	trnt1	99	83.815	ENSMALG00000008376	trnt1	83	83.815	Monopterus_albus
ENSNBRG00000023606	trnt1	99	66.377	MGP_CAROLIEiJ_G0028698	Trnt1	96	71.648	Mus_caroli
ENSNBRG00000023606	trnt1	99	66.377	ENSMUSG00000013736	Trnt1	91	75.510	Mus_musculus
ENSNBRG00000023606	trnt1	99	67.246	MGP_PahariEiJ_G0022449	Trnt1	97	76.531	Mus_pahari
ENSNBRG00000023606	trnt1	99	66.377	MGP_SPRETEiJ_G0029726	Trnt1	91	75.510	Mus_spretus
ENSNBRG00000023606	trnt1	99	66.763	ENSMPUG00000017017	TRNT1	77	66.763	Mustela_putorius_furo
ENSNBRG00000023606	trnt1	88	70.395	ENSMLUG00000011864	TRNT1	79	70.395	Myotis_lucifugus
ENSNBRG00000023606	trnt1	99	66.087	ENSNGAG00000000537	Trnt1	85	75.127	Nannospalax_galili
ENSNBRG00000023606	trnt1	99	67.919	ENSNLEG00000003226	TRNT1	79	67.919	Nomascus_leucogenys
ENSNBRG00000023606	trnt1	96	65.868	ENSMEUG00000004684	TRNT1	77	65.868	Notamacropus_eugenii
ENSNBRG00000023606	trnt1	87	63.366	ENSOPRG00000015067	TRNT1	78	63.366	Ochotona_princeps
ENSNBRG00000023606	trnt1	99	67.246	ENSODEG00000007597	TRNT1	79	67.246	Octodon_degus
ENSNBRG00000023606	trnt1	99	97.399	ENSONIG00000020273	trnt1	80	97.399	Oreochromis_niloticus
ENSNBRG00000023606	trnt1	94	65.138	ENSOANG00000007514	TRNT1	76	65.138	Ornithorhynchus_anatinus
ENSNBRG00000023606	trnt1	99	65.318	ENSOCUG00000008580	TRNT1	80	65.318	Oryctolagus_cuniculus
ENSNBRG00000023606	trnt1	99	77.874	ENSORLG00000003165	trnt1	81	77.874	Oryzias_latipes
ENSNBRG00000023606	trnt1	99	78.161	ENSORLG00020022060	trnt1	81	78.161	Oryzias_latipes_hni
ENSNBRG00000023606	trnt1	99	78.448	ENSORLG00015018915	trnt1	80	78.448	Oryzias_latipes_hsok
ENSNBRG00000023606	trnt1	99	77.168	ENSOMEG00000003331	trnt1	81	77.168	Oryzias_melastigma
ENSNBRG00000023606	trnt1	99	66.667	ENSOARG00000008631	TRNT1	79	66.667	Ovis_aries
ENSNBRG00000023606	trnt1	99	67.246	ENSPPAG00000043566	TRNT1	79	67.246	Pan_paniscus
ENSNBRG00000023606	trnt1	99	66.957	ENSPPRG00000001327	TRNT1	79	66.957	Panthera_pardus
ENSNBRG00000023606	trnt1	99	66.957	ENSPTIG00000011448	TRNT1	79	66.957	Panthera_tigris_altaica
ENSNBRG00000023606	trnt1	99	66.957	ENSPTRG00000014564	TRNT1	79	66.957	Pan_troglodytes
ENSNBRG00000023606	trnt1	99	67.919	ENSPANG00000025944	TRNT1	79	67.919	Papio_anubis
ENSNBRG00000023606	trnt1	99	73.926	ENSPKIG00000020015	trnt1	81	73.926	Paramormyrops_kingsleyae
ENSNBRG00000023606	trnt1	91	66.984	ENSPSIG00000017356	TRNT1	79	66.984	Pelodiscus_sinensis
ENSNBRG00000023606	trnt1	99	79.191	ENSPMGG00000008888	trnt1	80	79.191	Periophthalmus_magnuspinnatus
ENSNBRG00000023606	trnt1	99	65.797	ENSPEMG00000019845	Trnt1	79	65.797	Peromyscus_maniculatus_bairdii
ENSNBRG00000023606	trnt1	99	66.374	ENSPCIG00000030436	TRNT1	79	66.374	Phascolarctos_cinereus
ENSNBRG00000023606	trnt1	99	82.507	ENSPFOG00000006194	trnt1	80	82.507	Poecilia_formosa
ENSNBRG00000023606	trnt1	99	82.507	ENSPLAG00000015623	trnt1	80	84.830	Poecilia_latipinna
ENSNBRG00000023606	trnt1	99	82.370	ENSPMEG00000012216	trnt1	80	84.520	Poecilia_mexicana
ENSNBRG00000023606	trnt1	99	81.792	ENSPREG00000021470	trnt1	81	81.792	Poecilia_reticulata
ENSNBRG00000023606	trnt1	99	67.341	ENSPPYG00000013702	TRNT1	79	67.341	Pongo_abelii
ENSNBRG00000023606	trnt1	87	70.530	ENSPCAG00000001951	TRNT1	79	70.530	Procavia_capensis
ENSNBRG00000023606	trnt1	99	67.246	ENSPCOG00000022228	TRNT1	79	67.246	Propithecus_coquereli
ENSNBRG00000023606	trnt1	87	69.637	ENSPVAG00000008784	TRNT1	79	69.637	Pteropus_vampyrus
ENSNBRG00000023606	trnt1	99	97.399	ENSPNYG00000003120	trnt1	81	97.399	Pundamilia_nyererei
ENSNBRG00000023606	trnt1	99	77.364	ENSPNAG00000000565	trnt1	81	77.364	Pygocentrus_nattereri
ENSNBRG00000023606	trnt1	99	66.667	ENSRNOG00000006432	Trnt1	79	66.667	Rattus_norvegicus
ENSNBRG00000023606	trnt1	99	66.763	ENSRBIG00000042632	TRNT1	79	66.763	Rhinopithecus_bieti
ENSNBRG00000023606	trnt1	99	67.919	ENSRROG00000036866	TRNT1	79	67.919	Rhinopithecus_roxellana
ENSNBRG00000023606	trnt1	99	67.052	ENSSBOG00000021208	TRNT1	79	67.052	Saimiri_boliviensis_boliviensis
ENSNBRG00000023606	trnt1	95	65.559	ENSSHAG00000018861	TRNT1	76	65.559	Sarcophilus_harrisii
ENSNBRG00000023606	trnt1	99	74.571	ENSSFOG00015020844	trnt1	81	74.571	Scleropages_formosus
ENSNBRG00000023606	trnt1	100	86.744	ENSSMAG00000015432	trnt1	79	86.705	Scophthalmus_maximus
ENSNBRG00000023606	trnt1	99	89.595	ENSSDUG00000012320	trnt1	81	89.595	Seriola_dumerili
ENSNBRG00000023606	trnt1	99	89.017	ENSSLDG00000009325	trnt1	81	89.017	Seriola_lalandi_dorsalis
ENSNBRG00000023606	trnt1	70	84.711	ENSSLDG00000016463	-	91	85.000	Seriola_lalandi_dorsalis
ENSNBRG00000023606	trnt1	87	69.868	ENSSPUG00000014153	TRNT1	79	69.868	Sphenodon_punctatus
ENSNBRG00000023606	trnt1	99	86.416	ENSSPAG00000021005	trnt1	81	86.416	Stegastes_partitus
ENSNBRG00000023606	trnt1	99	66.763	ENSSSCG00000011529	TRNT1	81	66.763	Sus_scrofa
ENSNBRG00000023606	trnt1	93	66.975	ENSTGUG00000010192	TRNT1	80	66.975	Taeniopygia_guttata
ENSNBRG00000023606	trnt1	99	84.971	ENSTRUG00000001088	trnt1	81	84.971	Takifugu_rubripes
ENSNBRG00000023606	trnt1	99	83.815	ENSTNIG00000007363	trnt1	80	83.815	Tetraodon_nigroviridis
ENSNBRG00000023606	trnt1	75	60.456	ENSTBEG00000006367	TRNT1	86	60.456	Tupaia_belangeri
ENSNBRG00000023606	trnt1	99	66.667	ENSTTRG00000007803	TRNT1	79	66.667	Tursiops_truncatus
ENSNBRG00000023606	trnt1	99	67.246	ENSUAMG00000022574	TRNT1	79	67.246	Ursus_americanus
ENSNBRG00000023606	trnt1	99	67.246	ENSUMAG00000024092	TRNT1	79	67.246	Ursus_maritimus
ENSNBRG00000023606	trnt1	97	68.343	ENSVVUG00000012810	TRNT1	82	68.343	Vulpes_vulpes
ENSNBRG00000023606	trnt1	98	60.117	ENSXETG00000025091	trnt1	80	61.300	Xenopus_tropicalis
ENSNBRG00000023606	trnt1	99	81.792	ENSXCOG00000010150	trnt1	81	81.792	Xiphophorus_couchianus
ENSNBRG00000023606	trnt1	99	82.370	ENSXMAG00000002227	trnt1	81	82.370	Xiphophorus_maculatus