EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023669 (Gene tree)
Gene ID: -
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR domain containing 14
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3979 bases
Position: chrJH422306.1:1290895-1294873
Accession: ZDB-GENE-030131-2709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031160	zf-C2H2	PF00096.26	4.6e-21	1	2
ENSNBRP00000031160	zf-C2H2	PF00096.26	4.6e-21	2	2
ENSNBRP00000031160	zf-met	PF12874.7	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031949	-	1806	-	ENSNBRP00000031160	601 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000023669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023669	prdm14	71	41.892	ENSNBRG00000006727	prdm12b	71	41.892
ENSNBRG00000023669	prdm14	58	34.074	ENSNBRG00000018449	PRDM15	62	34.074
ENSNBRG00000023669	prdm14	52	39.506	ENSNBRG00000024312	-	64	39.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023669	prdm14	100	83.007	ENSACIG00000022698	prdm14	100	85.948	Amphilophus_citrinellus
ENSNBRG00000023669	prdm14	100	88.072	ENSACLG00000025407	prdm14	100	92.308	Astatotilapia_calliptera
ENSNBRG00000023669	prdm14	63	72.679	ENSAMXG00000000512	prdm14	79	72.679	Astyanax_mexicanus
ENSNBRG00000023669	prdm14	89	51.504	ENSBTAG00000000060	PRDM14	97	51.957	Bos_taurus
ENSNBRG00000023669	prdm14	66	63.409	ENSCHIG00000009297	PRDM14	69	63.409	Capra_hircus
ENSNBRG00000023669	prdm14	69	62.892	ENSTSYG00000010610	PRDM14	97	63.840	Carlito_syrichta
ENSNBRG00000023669	prdm14	62	65.252	ENSCPOG00000027176	PRDM14	73	65.252	Cavia_porcellus
ENSNBRG00000023669	prdm14	62	56.878	ENSCCAG00000026032	PRDM14	64	58.995	Cebus_capucinus
ENSNBRG00000023669	prdm14	91	49.738	ENSCLAG00000001937	PRDM14	99	49.825	Chinchilla_lanigera
ENSNBRG00000023669	prdm14	83	72.421	ENSGACG00000002829	prdm14	100	70.949	Gasterosteus_aculeatus
ENSNBRG00000023669	prdm14	100	98.669	ENSHBUG00000019660	prdm14	100	98.669	Haplochromis_burtoni
ENSNBRG00000023669	prdm14	100	99.002	ENSMZEG00005021597	prdm14	100	99.002	Maylandia_zebra
ENSNBRG00000023669	prdm14	86	50.735	ENSODEG00000003245	PRDM14	95	50.556	Octodon_degus
ENSNBRG00000023669	prdm14	66	63.409	ENSOARG00000003528	PRDM14	80	63.409	Ovis_aries
ENSNBRG00000023669	prdm14	100	98.003	ENSPNYG00000001938	prdm14	100	98.003	Pundamilia_nyererei
ENSNBRG00000023669	prdm14	100	85.430	ENSSDUG00000013311	prdm14	100	85.430	Seriola_dumerili
ENSNBRG00000023669	prdm14	100	85.596	ENSSLDG00000006506	prdm14	100	85.596	Seriola_lalandi_dorsalis
ENSNBRG00000023669	prdm14	62	87.166	ENSTNIG00000008194	prdm14	99	87.166	Tetraodon_nigroviridis