EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023775 (Gene tree)
Gene ID: 102778713
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 14594 bases
Position: chrJH422293.1:2891808-2906401
Accession: 102778713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031304	MMR_HSR1	PF01926.23	2.2e-08	1	1
ENSNBRP00000031298	MMR_HSR1	PF01926.23	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032097	-	1413	-	ENSNBRP00000031304	470 (aa)	-	-
ENSNBRT00000032091	-	4272	XM_006791436	ENSNBRP00000031298	470 (aa)	XP_006791499	UPI0003EBC5FC

Gene Model

Click here to download ENSNBRG00000023775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023775	srl	88	30.918	ENSNBRG00000002925	ehd2a	73	30.918
ENSNBRG00000023775	srl	85	32.506	ENSNBRG00000022623	ehd4	71	32.506
ENSNBRG00000023775	srl	99	72.671	ENSNBRG00000002422	SRL	60	72.671
ENSNBRG00000023775	srl	79	32.976	ENSNBRG00000022653	ehd3	70	33.333
ENSNBRG00000023775	srl	82	31.186	ENSNBRG00000002933	ehd1a	70	31.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023775	srl	96	81.938	ENSG00000185739	SRL	99	83.256	Homo_sapiens
ENSNBRG00000023775	srl	94	77.201	ENSAPOG00000012432	SRL	99	77.201	Acanthochromis_polyacanthus
ENSNBRG00000023775	srl	100	96.391	ENSAPOG00000018093	srl	100	96.391	Acanthochromis_polyacanthus
ENSNBRG00000023775	srl	98	80.994	ENSAMEG00000010862	SRL	52	80.994	Ailuropoda_melanoleuca
ENSNBRG00000023775	srl	96	98.670	ENSACIG00000015799	srl	100	98.670	Amphilophus_citrinellus
ENSNBRG00000023775	srl	95	75.670	ENSACIG00000015419	SRL	99	75.670	Amphilophus_citrinellus
ENSNBRG00000023775	srl	92	97.235	ENSAOCG00000007574	srl	100	97.235	Amphiprion_ocellaris
ENSNBRG00000023775	srl	98	75.652	ENSAOCG00000017049	SRL	100	75.870	Amphiprion_ocellaris
ENSNBRG00000023775	srl	100	96.603	ENSAPEG00000006911	srl	100	96.603	Amphiprion_percula
ENSNBRG00000023775	srl	98	72.549	ENSAPEG00000006533	SRL	100	73.043	Amphiprion_percula
ENSNBRG00000023775	srl	100	96.178	ENSATEG00000024315	srl	100	96.178	Anabas_testudineus
ENSNBRG00000023775	srl	97	75.641	ENSATEG00000009643	SRL	52	77.193	Anabas_testudineus
ENSNBRG00000023775	srl	94	82.340	ENSACAG00000016380	SRL	89	79.098	Anolis_carolinensis
ENSNBRG00000023775	srl	100	99.574	ENSACLG00000027685	srl	100	99.574	Astatotilapia_calliptera
ENSNBRG00000023775	srl	97	74.145	ENSACLG00000024674	SRL	58	74.946	Astatotilapia_calliptera
ENSNBRG00000023775	srl	93	74.487	ENSAMXG00000038693	SRL	100	73.951	Astyanax_mexicanus
ENSNBRG00000023775	srl	99	92.111	ENSAMXG00000018789	srl	92	92.111	Astyanax_mexicanus
ENSNBRG00000023775	srl	97	82.237	ENSBTAG00000001078	SRL	58	82.237	Bos_taurus
ENSNBRG00000023775	srl	94	83.032	ENSCJAG00000019750	SRL	98	81.075	Callithrix_jacchus
ENSNBRG00000023775	srl	97	81.360	ENSCAFG00000019233	SRL	85	81.360	Canis_familiaris
ENSNBRG00000023775	srl	96	81.678	ENSCAFG00020025024	SRL	56	81.678	Canis_lupus_dingo
ENSNBRG00000023775	srl	98	82.213	ENSCHIG00000017927	SRL	57	82.637	Capra_hircus
ENSNBRG00000023775	srl	99	81.290	ENSTSYG00000007919	SRL	99	83.953	Carlito_syrichta
ENSNBRG00000023775	srl	96	82.301	ENSCPOG00000012643	SRL	98	81.505	Cavia_porcellus
ENSNBRG00000023775	srl	94	77.602	ENSCCAG00000032646	SRL	100	84.433	Cebus_capucinus
ENSNBRG00000023775	srl	97	81.619	ENSCATG00000032227	-	98	81.075	Cercocebus_atys
ENSNBRG00000023775	srl	96	82.522	ENSCLAG00000016242	SRL	98	81.720	Chinchilla_lanigera
ENSNBRG00000023775	srl	82	85.974	ENSCHOG00000001618	SRL	52	85.974	Choloepus_hoffmanni
ENSNBRG00000023775	srl	96	85.492	ENSCPBG00000026371	SRL	99	79.498	Chrysemys_picta_bellii
ENSNBRG00000023775	srl	91	59.441	ENSCING00000005231	-	95	59.441	Ciona_intestinalis
ENSNBRG00000023775	srl	96	81.938	ENSCANG00000035872	SRL	99	83.256	Colobus_angolensis_palliatus
ENSNBRG00000023775	srl	97	82.895	ENSCGRG00001016630	Srl	98	82.151	Cricetulus_griseus_chok1gshd
ENSNBRG00000023775	srl	97	82.895	ENSCGRG00000005458	Srl	98	82.151	Cricetulus_griseus_crigri
ENSNBRG00000023775	srl	99	73.036	ENSCSEG00000011866	SRL	95	73.248	Cynoglossus_semilaevis
ENSNBRG00000023775	srl	100	95.754	ENSCSEG00000016151	srl	100	95.754	Cynoglossus_semilaevis
ENSNBRG00000023775	srl	96	76.522	ENSCVAG00000022465	SRL	61	76.522	Cyprinodon_variegatus
ENSNBRG00000023775	srl	100	92.979	ENSCVAG00000003513	srl	100	94.480	Cyprinodon_variegatus
ENSNBRG00000023775	srl	81	78.646	ENSDARG00000112959	CABZ01072309.1	100	78.646	Danio_rerio
ENSNBRG00000023775	srl	100	91.277	ENSDARG00000104587	srl	100	91.277	Danio_rerio
ENSNBRG00000023775	srl	95	82.444	ENSDNOG00000011643	SRL	54	82.340	Dasypus_novemcinctus
ENSNBRG00000023775	srl	97	82.456	ENSDORG00000014807	Srl	98	82.151	Dipodomys_ordii
ENSNBRG00000023775	srl	79	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSNBRG00000023775	srl	94	83.447	ENSEASG00005000942	SRL	55	81.798	Equus_asinus_asinus
ENSNBRG00000023775	srl	98	81.681	ENSECAG00000024219	SRL	98	81.681	Equus_caballus
ENSNBRG00000023775	srl	97	73.362	ENSELUG00000022266	SRL	50	73.036	Esox_lucius
ENSNBRG00000023775	srl	100	85.010	ENSELUG00000015616	srl	100	85.010	Esox_lucius
ENSNBRG00000023775	srl	99	80.000	ENSFCAG00000022075	SRL	98	80.645	Felis_catus
ENSNBRG00000023775	srl	96	82.262	ENSFALG00000004328	SRL	63	83.409	Ficedula_albicollis
ENSNBRG00000023775	srl	96	83.186	ENSFDAG00000006199	SRL	98	82.581	Fukomys_damarensis
ENSNBRG00000023775	srl	100	94.692	ENSFHEG00000011239	srl	100	94.692	Fundulus_heteroclitus
ENSNBRG00000023775	srl	94	77.477	ENSFHEG00000011854	SRL	99	77.703	Fundulus_heteroclitus
ENSNBRG00000023775	srl	94	89.427	ENSGMOG00000014954	srl	100	89.427	Gadus_morhua
ENSNBRG00000023775	srl	98	81.641	ENSGALG00000038884	SRL	98	81.641	Gallus_gallus
ENSNBRG00000023775	srl	96	78.174	ENSGAFG00000016984	SRL	100	78.174	Gambusia_affinis
ENSNBRG00000023775	srl	100	94.904	ENSGAFG00000000010	srl	100	94.904	Gambusia_affinis
ENSNBRG00000023775	srl	94	94.066	ENSGACG00000011332	srl	100	94.066	Gasterosteus_aculeatus
ENSNBRG00000023775	srl	97	81.579	ENSGGOG00000011312	-	98	80.860	Gorilla_gorilla
ENSNBRG00000023775	srl	100	99.574	ENSHBUG00000007581	srl	100	99.574	Haplochromis_burtoni
ENSNBRG00000023775	srl	97	74.573	ENSHBUG00000015710	SRL	60	73.085	Haplochromis_burtoni
ENSNBRG00000023775	srl	96	82.965	ENSHGLG00000015271	SRL	98	82.151	Heterocephalus_glaber_female
ENSNBRG00000023775	srl	96	82.965	ENSHGLG00100019378	SRL	98	82.151	Heterocephalus_glaber_male
ENSNBRG00000023775	srl	100	94.703	ENSHCOG00000008687	srl	99	95.982	Hippocampus_comes
ENSNBRG00000023775	srl	94	75.385	ENSHCOG00000001012	SRL	50	75.385	Hippocampus_comes
ENSNBRG00000023775	srl	93	70.183	ENSIPUG00000011609	SRL	95	70.183	Ictalurus_punctatus
ENSNBRG00000023775	srl	100	90.870	ENSIPUG00000012513	srl	100	90.870	Ictalurus_punctatus
ENSNBRG00000023775	srl	97	82.456	ENSSTOG00000021151	-	98	81.720	Ictidomys_tridecemlineatus
ENSNBRG00000023775	srl	99	82.581	ENSJJAG00000016400	Srl	98	82.581	Jaculus_jaculus
ENSNBRG00000023775	srl	98	94.143	ENSKMAG00000014115	srl	93	96.200	Kryptolebias_marmoratus
ENSNBRG00000023775	srl	94	77.098	ENSKMAG00000019537	SRL	100	77.098	Kryptolebias_marmoratus
ENSNBRG00000023775	srl	97	74.292	ENSLBEG00000013811	SRL	99	74.510	Labrus_bergylta
ENSNBRG00000023775	srl	100	95.966	ENSLBEG00000026643	srl	100	95.966	Labrus_bergylta
ENSNBRG00000023775	srl	100	80.745	ENSLACG00000002825	SRL	100	84.071	Latimeria_chalumnae
ENSNBRG00000023775	srl	99	87.207	ENSLOCG00000002644	srl	100	87.207	Lepisosteus_oculatus
ENSNBRG00000023775	srl	96	81.898	ENSLAFG00000006329	SRL	52	81.898	Loxodonta_africana
ENSNBRG00000023775	srl	91	83.256	ENSMFAG00000037383	SRL	99	83.256	Macaca_fascicularis
ENSNBRG00000023775	srl	97	81.360	ENSMNEG00000019236	-	97	81.004	Macaca_nemestrina
ENSNBRG00000023775	srl	96	75.110	ENSMLEG00000032156	SRL	98	74.409	Mandrillus_leucophaeus
ENSNBRG00000023775	srl	99	93.790	ENSMAMG00000023322	srl	99	93.790	Mastacembelus_armatus
ENSNBRG00000023775	srl	94	76.211	ENSMAMG00000013756	SRL	53	76.211	Mastacembelus_armatus
ENSNBRG00000023775	srl	100	99.574	ENSMZEG00005004548	srl	100	99.574	Maylandia_zebra
ENSNBRG00000023775	srl	99	73.085	ENSMZEG00005004010	SRL	61	73.085	Maylandia_zebra
ENSNBRG00000023775	srl	96	82.159	ENSMGAG00000009342	SRL	97	83.290	Meleagris_gallopavo
ENSNBRG00000023775	srl	97	82.018	ENSMICG00000032307	SRL	98	81.290	Microcebus_murinus
ENSNBRG00000023775	srl	100	79.873	ENSMOCG00000008208	Srl	100	79.873	Microtus_ochrogaster
ENSNBRG00000023775	srl	94	74.945	ENSMMOG00000021572	SRL	99	74.945	Mola_mola
ENSNBRG00000023775	srl	96	95.556	ENSMMOG00000013970	srl	100	95.556	Mola_mola
ENSNBRG00000023775	srl	96	83.370	ENSMODG00000016380	-	51	83.370	Monodelphis_domestica
ENSNBRG00000023775	srl	89	78.043	ENSMALG00000000670	SRL	98	78.043	Monopterus_albus
ENSNBRG00000023775	srl	100	93.191	ENSMALG00000005039	srl	99	95.536	Monopterus_albus
ENSNBRG00000023775	srl	97	83.333	MGP_CAROLIEiJ_G0020400	Srl	98	82.759	Mus_caroli
ENSNBRG00000023775	srl	97	83.333	ENSMUSG00000022519	Srl	98	82.759	Mus_musculus
ENSNBRG00000023775	srl	97	83.333	MGP_SPRETEiJ_G0021294	Srl	98	82.759	Mus_spretus
ENSNBRG00000023775	srl	97	81.400	ENSMPUG00000015025	SRL	55	81.898	Mustela_putorius_furo
ENSNBRG00000023775	srl	97	82.314	ENSMLUG00000030733	SRL	58	82.314	Myotis_lucifugus
ENSNBRG00000023775	srl	94	84.615	ENSNGAG00000019741	Srl	98	82.328	Nannospalax_galili
ENSNBRG00000023775	srl	97	75.824	ENSNLEG00000029051	SRL	98	75.269	Nomascus_leucogenys
ENSNBRG00000023775	srl	97	76.096	ENSOPRG00000000477	-	54	76.096	Ochotona_princeps
ENSNBRG00000023775	srl	94	83.937	ENSODEG00000013256	SRL	98	81.681	Octodon_degus
ENSNBRG00000023775	srl	100	96.680	ENSONIG00000005192	srl	100	96.680	Oreochromis_niloticus
ENSNBRG00000023775	srl	97	81.223	ENSOCUG00000025140	SRL	50	81.898	Oryctolagus_cuniculus
ENSNBRG00000023775	srl	94	75.169	ENSORLG00000015064	SRL	97	75.169	Oryzias_latipes
ENSNBRG00000023775	srl	100	95.106	ENSORLG00000008291	srl	97	96.178	Oryzias_latipes
ENSNBRG00000023775	srl	94	75.395	ENSORLG00020018173	SRL	97	75.395	Oryzias_latipes_hni
ENSNBRG00000023775	srl	100	95.532	ENSORLG00020019784	srl	85	96.603	Oryzias_latipes_hni
ENSNBRG00000023775	srl	94	75.395	ENSORLG00015019063	SRL	97	75.395	Oryzias_latipes_hsok
ENSNBRG00000023775	srl	100	95.106	ENSORLG00015009342	srl	97	96.178	Oryzias_latipes_hsok
ENSNBRG00000023775	srl	100	95.319	ENSOMEG00000010006	srl	100	96.391	Oryzias_melastigma
ENSNBRG00000023775	srl	94	73.904	ENSOMEG00000005682	SRL	53	74.179	Oryzias_melastigma
ENSNBRG00000023775	srl	97	81.798	ENSOGAG00000029266	SRL	56	81.798	Otolemur_garnettii
ENSNBRG00000023775	srl	98	82.213	ENSOARG00000003074	SRL	57	82.637	Ovis_aries
ENSNBRG00000023775	srl	97	81.579	ENSPPAG00000024919	-	99	83.256	Pan_paniscus
ENSNBRG00000023775	srl	99	80.000	ENSPPRG00000010274	SRL	98	84.360	Panthera_pardus
ENSNBRG00000023775	srl	99	80.000	ENSPTIG00000015162	SRL	98	84.360	Panthera_tigris_altaica
ENSNBRG00000023775	srl	97	81.579	ENSPTRG00000007712	SRL	99	83.256	Pan_troglodytes
ENSNBRG00000023775	srl	97	81.579	ENSPANG00000013804	SRL	98	81.579	Papio_anubis
ENSNBRG00000023775	srl	100	78.556	ENSPKIG00000024974	SRL	96	76.667	Paramormyrops_kingsleyae
ENSNBRG00000023775	srl	100	90.063	ENSPKIG00000006405	srl	100	90.063	Paramormyrops_kingsleyae
ENSNBRG00000023775	srl	96	81.938	ENSPSIG00000008586	SRL	51	81.938	Pelodiscus_sinensis
ENSNBRG00000023775	srl	94	76.244	ENSPMGG00000023505	-	99	76.244	Periophthalmus_magnuspinnatus
ENSNBRG00000023775	srl	96	94.678	ENSPMGG00000021081	srl	97	94.678	Periophthalmus_magnuspinnatus
ENSNBRG00000023775	srl	96	82.743	ENSPEMG00000015842	Srl	98	81.720	Peromyscus_maniculatus_bairdii
ENSNBRG00000023775	srl	89	68.349	ENSPMAG00000004786	srl	99	68.349	Petromyzon_marinus
ENSNBRG00000023775	srl	96	82.927	ENSPCIG00000012128	SRL	99	82.927	Phascolarctos_cinereus
ENSNBRG00000023775	srl	100	92.754	ENSPFOG00000011408	srl	97	92.324	Poecilia_formosa
ENSNBRG00000023775	srl	98	94.553	ENSPLAG00000008017	srl	100	94.143	Poecilia_latipinna
ENSNBRG00000023775	srl	96	76.837	ENSPLAG00000002932	SRL	100	76.837	Poecilia_latipinna
ENSNBRG00000023775	srl	98	74.207	ENSPMEG00000005890	SRL	62	73.784	Poecilia_mexicana
ENSNBRG00000023775	srl	100	95.117	ENSPMEG00000006745	srl	100	94.143	Poecilia_mexicana
ENSNBRG00000023775	srl	96	77.951	ENSPREG00000000315	SRL	100	77.951	Poecilia_reticulata
ENSNBRG00000023775	srl	100	95.117	ENSPREG00000007751	srl	99	96.000	Poecilia_reticulata
ENSNBRG00000023775	srl	89	84.726	ENSPPYG00000007053	SRL	98	84.726	Pongo_abelii
ENSNBRG00000023775	srl	96	82.965	ENSPCAG00000003378	-	51	82.965	Procavia_capensis
ENSNBRG00000023775	srl	97	81.659	ENSPCOG00000023135	SRL	99	83.721	Propithecus_coquereli
ENSNBRG00000023775	srl	97	82.057	ENSPVAG00000006586	SRL	56	82.561	Pteropus_vampyrus
ENSNBRG00000023775	srl	99	73.085	ENSPNYG00000003423	SRL	60	73.085	Pundamilia_nyererei
ENSNBRG00000023775	srl	100	99.362	ENSPNYG00000001200	srl	100	99.362	Pundamilia_nyererei
ENSNBRG00000023775	srl	94	76.417	ENSPNAG00000007361	-	91	76.417	Pygocentrus_nattereri
ENSNBRG00000023775	srl	100	91.064	ENSPNAG00000023106	srl	100	91.064	Pygocentrus_nattereri
ENSNBRG00000023775	srl	97	82.895	ENSRNOG00000005269	Srl	50	83.223	Rattus_norvegicus
ENSNBRG00000023775	srl	97	81.579	ENSRBIG00000042358	SRL	51	81.579	Rhinopithecus_bieti
ENSNBRG00000023775	srl	94	83.032	ENSSBOG00000029273	SRL	98	81.075	Saimiri_boliviensis_boliviensis
ENSNBRG00000023775	srl	96	83.111	ENSSHAG00000011715	-	51	83.111	Sarcophilus_harrisii
ENSNBRG00000023775	srl	100	88.636	ENSSFOG00015009773	srl	99	91.106	Scleropages_formosus
ENSNBRG00000023775	srl	95	77.803	ENSSFOG00015021327	SRL	50	77.679	Scleropages_formosus
ENSNBRG00000023775	srl	94	75.165	ENSSMAG00000002232	SRL	50	75.165	Scophthalmus_maximus
ENSNBRG00000023775	srl	100	95.754	ENSSMAG00000016274	srl	100	95.754	Scophthalmus_maximus
ENSNBRG00000023775	srl	95	96.861	ENSSDUG00000010808	srl	98	96.861	Seriola_dumerili
ENSNBRG00000023775	srl	94	77.556	ENSSDUG00000009161	SRL	99	77.556	Seriola_dumerili
ENSNBRG00000023775	srl	100	94.681	ENSSLDG00000022024	srl	100	96.178	Seriola_lalandi_dorsalis
ENSNBRG00000023775	srl	94	77.293	ENSSLDG00000014601	SRL	100	77.851	Seriola_lalandi_dorsalis
ENSNBRG00000023775	srl	96	81.637	ENSSPUG00000016859	SRL	99	81.637	Sphenodon_punctatus
ENSNBRG00000023775	srl	100	96.822	ENSSPAG00000019105	srl	100	96.822	Stegastes_partitus
ENSNBRG00000023775	srl	94	78.685	ENSSPAG00000014254	SRL	98	78.685	Stegastes_partitus
ENSNBRG00000023775	srl	97	81.798	ENSSSCG00000007949	SRL	98	83.220	Sus_scrofa
ENSNBRG00000023775	srl	94	83.636	ENSTGUG00000003951	-	97	83.636	Taeniopygia_guttata
ENSNBRG00000023775	srl	77	86.188	ENSTGUG00000016121	-	100	86.188	Taeniopygia_guttata
ENSNBRG00000023775	srl	100	95.754	ENSTRUG00000006005	srl	100	95.754	Takifugu_rubripes
ENSNBRG00000023775	srl	89	78.282	ENSTRUG00000013310	SRL	55	78.282	Takifugu_rubripes
ENSNBRG00000023775	srl	97	95.824	ENSTNIG00000009739	srl	100	94.692	Tetraodon_nigroviridis
ENSNBRG00000023775	srl	97	81.004	ENSUAMG00000005701	SRL	56	81.498	Ursus_americanus
ENSNBRG00000023775	srl	97	81.004	ENSUMAG00000002574	SRL	56	81.498	Ursus_maritimus
ENSNBRG00000023775	srl	97	80.963	ENSVVUG00000016331	-	50	81.678	Vulpes_vulpes
ENSNBRG00000023775	srl	97	81.099	ENSXETG00000017313	srl	99	81.416	Xenopus_tropicalis
ENSNBRG00000023775	srl	90	96.200	ENSXCOG00000010424	srl	97	96.200	Xiphophorus_couchianus
ENSNBRG00000023775	srl	96	78.000	ENSXCOG00000014584	SRL	99	78.000	Xiphophorus_couchianus
ENSNBRG00000023775	srl	98	74.419	ENSXMAG00000027598	SRL	64	75.214	Xiphophorus_maculatus
ENSNBRG00000023775	srl	100	94.904	ENSXMAG00000004625	srl	95	94.904	Xiphophorus_maculatus