EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023846 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 25805 bases
Position: chrJH422282.1:5760220-5786024
Accession: 102798704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031388	La	PF05383.17	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032184	-	2661	XM_006786292	ENSNBRP00000031388	886 (aa)	XP_006786355	-

Gene Model

Click here to download ENSNBRG00000023846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023846	larp1b	88	55.871	ENSNBRG00000008963	larp1	81	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023846	larp1b	84	54.762	ENSG00000138709	LARP1B	76	56.815	Homo_sapiens
ENSNBRG00000023846	larp1b	100	77.848	ENSAPOG00000020101	larp1b	93	77.960	Acanthochromis_polyacanthus
ENSNBRG00000023846	larp1b	100	83.480	ENSACIG00000023890	larp1b	93	83.460	Amphilophus_citrinellus
ENSNBRG00000023846	larp1b	87	82.938	ENSAOCG00000014268	larp1b	88	82.710	Amphiprion_ocellaris
ENSNBRG00000023846	larp1b	100	78.861	ENSAPEG00000004126	larp1b	93	78.463	Amphiprion_percula
ENSNBRG00000023846	larp1b	100	78.454	ENSATEG00000017849	larp1b	92	77.554	Anabas_testudineus
ENSNBRG00000023846	larp1b	77	71.875	ENSAPLG00000010129	LARP1B	79	71.875	Anas_platyrhynchos
ENSNBRG00000023846	larp1b	80	56.584	ENSACAG00000011338	LARP1B	77	59.314	Anolis_carolinensis
ENSNBRG00000023846	larp1b	78	50.676	ENSANAG00000034618	LARP1B	76	52.221	Aotus_nancymaae
ENSNBRG00000023846	larp1b	100	96.951	ENSACLG00000011948	larp1b	87	96.951	Astatotilapia_calliptera
ENSNBRG00000023846	larp1b	91	59.634	ENSAMXG00000006805	larp1b	78	65.049	Astyanax_mexicanus
ENSNBRG00000023846	larp1b	79	56.466	ENSBTAG00000012135	LARP1B	82	52.920	Bos_taurus
ENSNBRG00000023846	larp1b	78	55.311	ENSCJAG00000003338	LARP1B	77	58.000	Callithrix_jacchus
ENSNBRG00000023846	larp1b	83	54.612	ENSCAFG00000003831	LARP1B	84	59.549	Canis_familiaris
ENSNBRG00000023846	larp1b	83	54.722	ENSCAFG00020018899	LARP1B	74	59.012	Canis_lupus_dingo
ENSNBRG00000023846	larp1b	83	53.012	ENSCHIG00000023144	LARP1B	84	55.243	Capra_hircus
ENSNBRG00000023846	larp1b	78	54.707	ENSCCAG00000021948	LARP1B	76	56.528	Cebus_capucinus
ENSNBRG00000023846	larp1b	77	54.935	ENSCATG00000013541	LARP1B	76	55.747	Cercocebus_atys
ENSNBRG00000023846	larp1b	80	55.000	ENSCSAG00000003582	LARP1B	85	55.006	Chlorocebus_sabaeus
ENSNBRG00000023846	larp1b	77	59.783	ENSCHOG00000005354	LARP1B	82	60.055	Choloepus_hoffmanni
ENSNBRG00000023846	larp1b	88	56.604	ENSCPBG00000017480	LARP1B	74	57.955	Chrysemys_picta_bellii
ENSNBRG00000023846	larp1b	77	56.234	ENSCANG00000026958	LARP1B	78	56.897	Colobus_angolensis_palliatus
ENSNBRG00000023846	larp1b	100	71.588	ENSCSEG00000013519	larp1b	87	73.770	Cynoglossus_semilaevis
ENSNBRG00000023846	larp1b	100	74.651	ENSCVAG00000005046	larp1b	94	71.990	Cyprinodon_variegatus
ENSNBRG00000023846	larp1b	92	63.590	ENSDARG00000061169	larp1b	78	65.113	Danio_rerio
ENSNBRG00000023846	larp1b	67	50.653	ENSETEG00000012497	LARP1B	72	51.885	Echinops_telfairi
ENSNBRG00000023846	larp1b	78	48.540	ENSEBUG00000003668	larp1b	80	48.329	Eptatretus_burgeri
ENSNBRG00000023846	larp1b	80	54.819	ENSEASG00005018106	LARP1B	79	58.910	Equus_asinus_asinus
ENSNBRG00000023846	larp1b	87	55.654	ENSECAG00000001088	LARP1B	68	58.333	Equus_caballus
ENSNBRG00000023846	larp1b	87	53.909	ENSELUG00000023774	larp1b	96	54.556	Esox_lucius
ENSNBRG00000023846	larp1b	79	53.059	ENSFALG00000008098	LARP1B	75	54.972	Ficedula_albicollis
ENSNBRG00000023846	larp1b	100	75.823	ENSFHEG00000010264	larp1b	89	75.063	Fundulus_heteroclitus
ENSNBRG00000023846	larp1b	85	66.372	ENSGMOG00000005207	larp1b	74	66.372	Gadus_morhua
ENSNBRG00000023846	larp1b	83	55.067	ENSGALG00000010207	LARP1B	73	56.871	Gallus_gallus
ENSNBRG00000023846	larp1b	100	71.036	ENSGAFG00000012012	larp1b	100	70.719	Gambusia_affinis
ENSNBRG00000023846	larp1b	96	66.880	ENSGACG00000004609	larp1b	88	68.010	Gasterosteus_aculeatus
ENSNBRG00000023846	larp1b	87	56.489	ENSGAGG00000017209	LARP1B	74	58.357	Gopherus_agassizii
ENSNBRG00000023846	larp1b	77	56.291	ENSGGOG00000015900	LARP1B	76	56.528	Gorilla_gorilla
ENSNBRG00000023846	larp1b	100	99.390	ENSHBUG00000009730	larp1b	93	99.390	Haplochromis_burtoni
ENSNBRG00000023846	larp1b	72	71.469	ENSHCOG00000000918	larp1b	95	73.684	Hippocampus_comes
ENSNBRG00000023846	larp1b	93	61.021	ENSIPUG00000012138	larp1b	80	64.085	Ictalurus_punctatus
ENSNBRG00000023846	larp1b	99	72.657	ENSKMAG00000011589	larp1b	92	70.860	Kryptolebias_marmoratus
ENSNBRG00000023846	larp1b	100	74.968	ENSLBEG00000005655	larp1b	92	74.747	Labrus_bergylta
ENSNBRG00000023846	larp1b	87	59.079	ENSLACG00000015247	LARP1B	74	61.748	Latimeria_chalumnae
ENSNBRG00000023846	larp1b	82	59.268	ENSLOCG00000010684	larp1b	86	58.333	Lepisosteus_oculatus
ENSNBRG00000023846	larp1b	77	56.494	ENSMFAG00000002218	LARP1B	76	57.328	Macaca_fascicularis
ENSNBRG00000023846	larp1b	77	56.234	ENSMMUG00000021347	LARP1B	76	57.328	Macaca_mulatta
ENSNBRG00000023846	larp1b	68	55.301	ENSMNEG00000030406	LARP1B	82	55.233	Macaca_nemestrina
ENSNBRG00000023846	larp1b	77	56.104	ENSMLEG00000009306	LARP1B	77	57.328	Mandrillus_leucophaeus
ENSNBRG00000023846	larp1b	99	76.786	ENSMAMG00000000081	larp1b	92	76.015	Mastacembelus_armatus
ENSNBRG00000023846	larp1b	81	91.027	ENSMZEG00005002545	larp1b	100	91.027	Maylandia_zebra
ENSNBRG00000023846	larp1b	73	52.038	ENSMGAG00000004809	LARP1B	72	55.932	Meleagris_gallopavo
ENSNBRG00000023846	larp1b	77	58.235	ENSMICG00000036111	LARP1B	76	59.562	Microcebus_murinus
ENSNBRG00000023846	larp1b	87	53.957	ENSMODG00000012300	LARP1B	73	58.739	Monodelphis_domestica
ENSNBRG00000023846	larp1b	100	76.396	ENSMALG00000003638	larp1b	94	74.079	Monopterus_albus
ENSNBRG00000023846	larp1b	84	55.407	ENSMPUG00000017365	LARP1B	69	59.795	Mustela_putorius_furo
ENSNBRG00000023846	larp1b	79	55.614	ENSMLUG00000010229	LARP1B	78	56.874	Myotis_lucifugus
ENSNBRG00000023846	larp1b	78	55.541	ENSNLEG00000013819	LARP1B	76	56.734	Nomascus_leucogenys
ENSNBRG00000023846	larp1b	66	54.167	ENSMEUG00000010308	LARP1B	73	53.846	Notamacropus_eugenii
ENSNBRG00000023846	larp1b	78	48.705	ENSOPRG00000005478	LARP1B	76	50.508	Ochotona_princeps
ENSNBRG00000023846	larp1b	84	97.333	ENSONIG00000012386	larp1b	87	97.333	Oreochromis_niloticus
ENSNBRG00000023846	larp1b	83	52.785	ENSOCUG00000013330	LARP1B	74	56.332	Oryctolagus_cuniculus
ENSNBRG00000023846	larp1b	97	74.011	ENSORLG00000017954	larp1b	93	72.081	Oryzias_latipes
ENSNBRG00000023846	larp1b	100	73.096	ENSORLG00020013081	larp1b	88	72.081	Oryzias_latipes_hni
ENSNBRG00000023846	larp1b	100	73.223	ENSORLG00015009580	larp1b	93	72.208	Oryzias_latipes_hsok
ENSNBRG00000023846	larp1b	100	75.349	ENSOMEG00000004210	larp1b	93	74.460	Oryzias_melastigma
ENSNBRG00000023846	larp1b	74	58.639	ENSOGAG00000005771	LARP1B	76	59.970	Otolemur_garnettii
ENSNBRG00000023846	larp1b	79	54.741	ENSOARG00000015300	LARP1B	85	54.522	Ovis_aries
ENSNBRG00000023846	larp1b	77	56.550	ENSPPAG00000030439	LARP1B	76	56.815	Pan_paniscus
ENSNBRG00000023846	larp1b	77	56.550	ENSPTRG00000016437	LARP1B	76	56.815	Pan_troglodytes
ENSNBRG00000023846	larp1b	77	56.234	ENSPANG00000012488	LARP1B	76	57.040	Papio_anubis
ENSNBRG00000023846	larp1b	82	48.832	ENSPKIG00000014360	larp1b	80	55.505	Paramormyrops_kingsleyae
ENSNBRG00000023846	larp1b	83	57.697	ENSPSIG00000012885	LARP1B	83	57.550	Pelodiscus_sinensis
ENSNBRG00000023846	larp1b	75	70.300	ENSPMGG00000007207	larp1b	90	69.577	Periophthalmus_magnuspinnatus
ENSNBRG00000023846	larp1b	69	65.625	ENSPMAG00000002700	larp1b	78	65.625	Petromyzon_marinus
ENSNBRG00000023846	larp1b	87	52.948	ENSPCIG00000026516	LARP1B	93	57.932	Phascolarctos_cinereus
ENSNBRG00000023846	larp1b	60	81.039	ENSPFOG00000022837	-	79	81.039	Poecilia_formosa
ENSNBRG00000023846	larp1b	100	75.758	ENSPFOG00000019519	larp1b	88	75.758	Poecilia_formosa
ENSNBRG00000023846	larp1b	100	76.426	ENSPLAG00000007115	larp1b	87	76.364	Poecilia_latipinna
ENSNBRG00000023846	larp1b	100	76.709	ENSPMEG00000001224	larp1b	92	76.806	Poecilia_mexicana
ENSNBRG00000023846	larp1b	81	53.036	ENSPCAG00000007546	LARP1B	76	55.316	Procavia_capensis
ENSNBRG00000023846	larp1b	77	50.549	ENSPCOG00000021874	LARP1B	75	50.373	Propithecus_coquereli
ENSNBRG00000023846	larp1b	76	54.654	ENSPVAG00000005373	LARP1B	76	56.808	Pteropus_vampyrus
ENSNBRG00000023846	larp1b	81	89.730	ENSPNYG00000017357	larp1b	100	89.602	Pundamilia_nyererei
ENSNBRG00000023846	larp1b	93	60.366	ENSPNAG00000008823	larp1b	90	53.962	Pygocentrus_nattereri
ENSNBRG00000023846	larp1b	77	56.494	ENSRROG00000030771	LARP1B	76	57.328	Rhinopithecus_roxellana
ENSNBRG00000023846	larp1b	59	54.007	ENSSHAG00000014474	LARP1B	74	56.225	Sarcophilus_harrisii
ENSNBRG00000023846	larp1b	80	90.000	ENSSMAG00000006347	larp1b	88	90.000	Scophthalmus_maximus
ENSNBRG00000023846	larp1b	100	77.456	ENSSDUG00000004182	larp1b	93	77.945	Seriola_dumerili
ENSNBRG00000023846	larp1b	98	70.737	ENSSLDG00000014613	larp1b	100	70.421	Seriola_lalandi_dorsalis
ENSNBRG00000023846	larp1b	80	57.424	ENSSPUG00000011837	LARP1B	77	60.829	Sphenodon_punctatus
ENSNBRG00000023846	larp1b	100	77.330	ENSSPAG00000017772	larp1b	93	74.729	Stegastes_partitus
ENSNBRG00000023846	larp1b	87	53.883	ENSSSCG00000034280	LARP1B	82	76.667	Sus_scrofa
ENSNBRG00000023846	larp1b	71	56.691	ENSTGUG00000002098	-	80	57.824	Taeniopygia_guttata
ENSNBRG00000023846	larp1b	95	73.836	ENSTRUG00000005612	larp1b	99	66.667	Takifugu_rubripes
ENSNBRG00000023846	larp1b	79	82.667	ENSTNIG00000012398	larp1b	85	82.667	Tetraodon_nigroviridis
ENSNBRG00000023846	larp1b	64	46.893	ENSTBEG00000004177	LARP1B	73	46.006	Tupaia_belangeri
ENSNBRG00000023846	larp1b	76	53.856	ENSTTRG00000012984	LARP1B	76	54.532	Tursiops_truncatus
ENSNBRG00000023846	larp1b	83	54.745	ENSUMAG00000007373	LARP1B	84	56.645	Ursus_maritimus
ENSNBRG00000023846	larp1b	69	49.929	ENSVPAG00000007223	LARP1B	70	55.696	Vicugna_pacos
ENSNBRG00000023846	larp1b	83	55.043	ENSVVUG00000011307	LARP1B	78	57.840	Vulpes_vulpes
ENSNBRG00000023846	larp1b	85	53.028	ENSXETG00000022512	larp1b	76	54.438	Xenopus_tropicalis
ENSNBRG00000023846	larp1b	100	66.458	ENSXCOG00000004435	larp1b	100	66.701	Xiphophorus_couchianus
ENSNBRG00000023846	larp1b	100	77.118	ENSXMAG00000008150	larp1b	97	73.939	Xiphophorus_maculatus