EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023948 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: sal-like protein 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 9167 bases
Position: chrJH422355.1:287156-296322
Accession: 102780913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031518	zf-C2H2	PF00096.26	1.7e-16	1	1
ENSNBRP00000031518	zf-met	PF12874.7	1.9e-10	1	2
ENSNBRP00000031518	zf-met	PF12874.7	1.9e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032314	-	3321	XM_006801695	ENSNBRP00000031518	1106 (aa)	XP_006801758	-

Gene Model

Click here to download ENSNBRG00000023948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023948	si:ch211-212k18.5	72	46.074	ENSNBRG00000017645	sall2	76	46.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023948	si:ch211-212k18.5	96	75.931	ENSAPOG00000013387	si:ch211-212k18.5	94	76.364	Acanthochromis_polyacanthus
ENSNBRG00000023948	si:ch211-212k18.5	82	85.170	ENSACIG00000019922	si:ch211-212k18.5	99	85.773	Amphilophus_citrinellus
ENSNBRG00000023948	si:ch211-212k18.5	96	78.179	ENSAOCG00000010737	si:ch211-212k18.5	94	79.621	Amphiprion_ocellaris
ENSNBRG00000023948	si:ch211-212k18.5	96	77.908	ENSAPEG00000006751	si:ch211-212k18.5	94	79.261	Amphiprion_percula
ENSNBRG00000023948	si:ch211-212k18.5	74	77.563	ENSATEG00000001254	si:ch211-212k18.5	95	78.246	Anabas_testudineus
ENSNBRG00000023948	si:ch211-212k18.5	55	45.431	ENSACLG00000019867	sall2	63	42.910	Astatotilapia_calliptera
ENSNBRG00000023948	si:ch211-212k18.5	99	93.655	ENSACLG00000009709	si:ch211-212k18.5	98	94.449	Astatotilapia_calliptera
ENSNBRG00000023948	si:ch211-212k18.5	96	57.439	ENSAMXG00000010979	si:ch211-212k18.5	99	54.691	Astyanax_mexicanus
ENSNBRG00000023948	si:ch211-212k18.5	61	41.677	ENSCSEG00000021148	sall2	63	50.370	Cynoglossus_semilaevis
ENSNBRG00000023948	si:ch211-212k18.5	96	67.498	ENSCSEG00000004426	si:ch211-212k18.5	94	67.444	Cynoglossus_semilaevis
ENSNBRG00000023948	si:ch211-212k18.5	96	68.668	ENSCVAG00000007475	si:ch211-212k18.5	94	68.755	Cyprinodon_variegatus
ENSNBRG00000023948	si:ch211-212k18.5	69	46.420	ENSDARG00000075116	sall2	65	48.670	Danio_rerio
ENSNBRG00000023948	si:ch211-212k18.5	97	56.868	ENSDARG00000103316	si:ch211-212k18.5	96	56.655	Danio_rerio
ENSNBRG00000023948	si:ch211-212k18.5	72	49.038	ENSELUG00000004389	sall2	66	51.288	Esox_lucius
ENSNBRG00000023948	si:ch211-212k18.5	96	60.107	ENSELUG00000024534	si:ch211-212k18.5	97	60.143	Esox_lucius
ENSNBRG00000023948	si:ch211-212k18.5	55	47.074	ENSFHEG00000017550	sall2	60	45.758	Fundulus_heteroclitus
ENSNBRG00000023948	si:ch211-212k18.5	96	70.732	ENSFHEG00000017264	si:ch211-212k18.5	94	70.551	Fundulus_heteroclitus
ENSNBRG00000023948	si:ch211-212k18.5	96	68.767	ENSGAFG00000003746	si:ch211-212k18.5	94	69.284	Gambusia_affinis
ENSNBRG00000023948	si:ch211-212k18.5	54	46.941	ENSGAFG00000015194	sall2	60	46.518	Gambusia_affinis
ENSNBRG00000023948	si:ch211-212k18.5	72	42.525	ENSHBUG00000002882	sall2	68	41.548	Haplochromis_burtoni
ENSNBRG00000023948	si:ch211-212k18.5	99	93.744	ENSHBUG00000019672	si:ch211-212k18.5	98	94.539	Haplochromis_burtoni
ENSNBRG00000023948	si:ch211-212k18.5	100	62.325	ENSHCOG00000002842	si:ch211-212k18.5	99	61.344	Hippocampus_comes
ENSNBRG00000023948	si:ch211-212k18.5	96	54.625	ENSIPUG00000002559	sall2	94	54.505	Ictalurus_punctatus
ENSNBRG00000023948	si:ch211-212k18.5	54	45.273	ENSKMAG00000020172	sall2	61	45.259	Kryptolebias_marmoratus
ENSNBRG00000023948	si:ch211-212k18.5	96	69.991	ENSKMAG00000019657	si:ch211-212k18.5	94	70.060	Kryptolebias_marmoratus
ENSNBRG00000023948	si:ch211-212k18.5	98	70.017	ENSLBEG00000020887	si:ch211-212k18.5	95	69.421	Labrus_bergylta
ENSNBRG00000023948	si:ch211-212k18.5	55	46.154	ENSMAMG00000016229	sall2	54	50.588	Mastacembelus_armatus
ENSNBRG00000023948	si:ch211-212k18.5	72	81.585	ENSMAMG00000015887	si:ch211-212k18.5	99	81.447	Mastacembelus_armatus
ENSNBRG00000023948	si:ch211-212k18.5	99	93.655	ENSMZEG00005021214	si:ch211-212k18.5	98	94.449	Maylandia_zebra
ENSNBRG00000023948	si:ch211-212k18.5	72	42.525	ENSMZEG00005012103	sall2	68	41.548	Maylandia_zebra
ENSNBRG00000023948	si:ch211-212k18.5	88	80.800	ENSMMOG00000012726	si:ch211-212k18.5	93	80.343	Mola_mola
ENSNBRG00000023948	si:ch211-212k18.5	94	71.875	ENSMALG00000000979	si:ch211-212k18.5	98	71.293	Monopterus_albus
ENSNBRG00000023948	si:ch211-212k18.5	99	66.778	ENSORLG00000030429	si:ch211-212k18.5	94	67.776	Oryzias_latipes
ENSNBRG00000023948	si:ch211-212k18.5	55	44.474	ENSORLG00020007873	sall2	52	60.317	Oryzias_latipes_hni
ENSNBRG00000023948	si:ch211-212k18.5	99	66.639	ENSORLG00020008145	si:ch211-212k18.5	99	65.497	Oryzias_latipes_hni
ENSNBRG00000023948	si:ch211-212k18.5	99	66.444	ENSORLG00015004982	si:ch211-212k18.5	99	65.298	Oryzias_latipes_hsok
ENSNBRG00000023948	si:ch211-212k18.5	55	44.532	ENSORLG00015002422	sall2	52	60.317	Oryzias_latipes_hsok
ENSNBRG00000023948	si:ch211-212k18.5	99	66.415	ENSOMEG00000013949	si:ch211-212k18.5	99	65.141	Oryzias_melastigma
ENSNBRG00000023948	si:ch211-212k18.5	74	51.672	ENSPKIG00000009207	sall2	67	51.296	Paramormyrops_kingsleyae
ENSNBRG00000023948	si:ch211-212k18.5	96	66.577	ENSPMGG00000018714	si:ch211-212k18.5	99	66.004	Periophthalmus_magnuspinnatus
ENSNBRG00000023948	si:ch211-212k18.5	99	67.225	ENSPFOG00000023705	si:ch211-212k18.5	100	69.573	Poecilia_formosa
ENSNBRG00000023948	si:ch211-212k18.5	54	48.821	ENSPFOG00000016504	sall2	62	46.521	Poecilia_formosa
ENSNBRG00000023948	si:ch211-212k18.5	54	46.367	ENSPLAG00000018320	sall2	60	46.475	Poecilia_latipinna
ENSNBRG00000023948	si:ch211-212k18.5	96	68.750	ENSPLAG00000002577	si:ch211-212k18.5	94	69.224	Poecilia_latipinna
ENSNBRG00000023948	si:ch211-212k18.5	54	46.235	ENSPMEG00000006335	sall2	60	45.396	Poecilia_mexicana
ENSNBRG00000023948	si:ch211-212k18.5	99	66.945	ENSPMEG00000016395	si:ch211-212k18.5	100	69.224	Poecilia_mexicana
ENSNBRG00000023948	si:ch211-212k18.5	54	46.631	ENSPREG00000021908	sall2	60	46.345	Poecilia_reticulata
ENSNBRG00000023948	si:ch211-212k18.5	99	66.639	ENSPREG00000005292	si:ch211-212k18.5	97	67.253	Poecilia_reticulata
ENSNBRG00000023948	si:ch211-212k18.5	99	94.789	ENSPNYG00000021576	si:ch211-212k18.5	97	94.789	Pundamilia_nyererei
ENSNBRG00000023948	si:ch211-212k18.5	96	58.127	ENSPNAG00000006123	si:ch211-212k18.5	93	57.862	Pygocentrus_nattereri
ENSNBRG00000023948	si:ch211-212k18.5	96	74.956	ENSSMAG00000006241	si:ch211-212k18.5	94	74.074	Scophthalmus_maximus
ENSNBRG00000023948	si:ch211-212k18.5	96	78.051	ENSSDUG00000006164	si:ch211-212k18.5	94	78.051	Seriola_dumerili
ENSNBRG00000023948	si:ch211-212k18.5	99	76.371	ENSSLDG00000003393	si:ch211-212k18.5	94	78.490	Seriola_lalandi_dorsalis
ENSNBRG00000023948	si:ch211-212k18.5	99	77.739	ENSSPAG00000013435	si:ch211-212k18.5	99	78.265	Stegastes_partitus
ENSNBRG00000023948	si:ch211-212k18.5	91	75.558	ENSTRUG00000025082	si:ch211-212k18.5	95	71.886	Takifugu_rubripes
ENSNBRG00000023948	si:ch211-212k18.5	96	70.410	ENSXCOG00000000762	si:ch211-212k18.5	94	70.793	Xiphophorus_couchianus
ENSNBRG00000023948	si:ch211-212k18.5	54	46.684	ENSXMAG00000000902	sall2	60	46.415	Xiphophorus_maculatus
ENSNBRG00000023948	si:ch211-212k18.5	96	68.499	ENSXMAG00000001461	si:ch211-212k18.5	97	67.755	Xiphophorus_maculatus