EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000023955 (Gene tree)
Gene ID
102782325
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
polyadenylate-binding protein 2-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
14706 bases
Position
chrJH422569.1:69182-83887
Accession
102782325
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000031527RRM_1PF00076.221.3e-1711
ENSNBRP00000031525RRM_1PF00076.223.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000032321-1786XM_006809410ENSNBRP00000031525284 (aa)XP_006809473UPI00022B2C42
ENSNBRT00000032323-531XM_006809411ENSNBRP00000031527176 (aa)XP_006809474-
Gene Model
Click here to download ENSNBRG00000023955's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023955's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000023955pabpn19058.385ENSNBRG00000017078PABPN1L7457.527
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000023955pabpn19482.143ENSG00000258643BCL2L2-PABPN16671.946Homo_sapiens
ENSNBRG00000023955pabpn19482.143ENSG00000100836PABPN19482.143Homo_sapiens
ENSNBRG00000023955pabpn110098.944ENSAPOG00000016425pabpn110098.944Acanthochromis_polyacanthus
ENSNBRG00000023955pabpn19482.143ENSAMEG00000007048BCL2L2-PABPN19484.270Ailuropoda_melanoleuca
ENSNBRG00000023955pabpn1100100.000ENSACIG00000021744pabpn1100100.000Amphilophus_citrinellus
ENSNBRG00000023955pabpn110098.295ENSAOCG00000015805pabpn19598.636Amphiprion_ocellaris
ENSNBRG00000023955pabpn110098.295ENSAPEG00000009623pabpn19598.636Amphiprion_percula
ENSNBRG00000023955pabpn110098.864ENSATEG00000020531pabpn19599.091Anabas_testudineus
ENSNBRG00000023955pabpn19483.333ENSACAG00000006185-7672.444Anolis_carolinensis
ENSNBRG00000023955pabpn19482.143ENSANAG00000024513-8075.652Aotus_nancymaae
ENSNBRG00000023955pabpn110097.909ENSACLG00000016374pabpn110097.909Astatotilapia_calliptera
ENSNBRG00000023955pabpn110097.175ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSNBRG00000023955pabpn19482.143ENSBTAG00000006884PABPN18469.841Bos_taurus
ENSNBRG00000023955pabpn19473.653ENSBTAG00000050594-7679.798Bos_taurus
ENSNBRG00000023955pabpn19480.952ENSBTAG00000053753-6783.333Bos_taurus
ENSNBRG00000023955pabpn17361.364WBGene00003904pabp-28654.696Caenorhabditis_elegans
ENSNBRG00000023955pabpn19482.143ENSCJAG00000007960-7976.018Callithrix_jacchus
ENSNBRG00000023955pabpn19480.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSNBRG00000023955pabpn19482.143ENSCAFG00000011482PABPN18270.635Canis_familiaris
ENSNBRG00000023955pabpn19482.143ENSCAFG00020007298-8270.238Canis_lupus_dingo
ENSNBRG00000023955pabpn19482.143ENSCAFG00020006651-8270.238Canis_lupus_dingo
ENSNBRG00000023955pabpn19482.143ENSCHIG00000012184PABPN18270.238Capra_hircus
ENSNBRG00000023955pabpn19482.143ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSNBRG00000023955pabpn17882.014ENSCAPG00000009461-9982.014Cavia_aperea
ENSNBRG00000023955pabpn19481.548ENSCPOG00000025574PABPN16481.726Cavia_porcellus
ENSNBRG00000023955pabpn19482.143ENSCCAG00000033954BCL2L2-PABPN17976.018Cebus_capucinus
ENSNBRG00000023955pabpn19482.143ENSCATG00000038536BCL2L2-PABPN17976.018Cercocebus_atys
ENSNBRG00000023955pabpn18582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSNBRG00000023955pabpn19480.952ENSCSAG00000016036PABPN18269.048Chlorocebus_sabaeus
ENSNBRG00000023955pabpn19474.405ENSCHOG00000004798BCL2L2-PABPN18770.192Choloepus_hoffmanni
ENSNBRG00000023955pabpn19483.929ENSCPBG00000026060-9483.929Chrysemys_picta_bellii
ENSNBRG00000023955pabpn110067.232ENSCING00000012468-8464.000Ciona_intestinalis
ENSNBRG00000023955pabpn110066.854ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSNBRG00000023955pabpn19482.143ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSNBRG00000023955pabpn19470.482ENSCANG00000030980-8364.474Colobus_angolensis_palliatus
ENSNBRG00000023955pabpn19481.548ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSNBRG00000023955pabpn19481.548ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSNBRG00000023955pabpn110097.159ENSCSEG00000008774pabpn19795.946Cynoglossus_semilaevis
ENSNBRG00000023955pabpn110091.497ENSCVAG00000003152pabpn110093.537Cyprinodon_variegatus
ENSNBRG00000023955pabpn19555.689ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSNBRG00000023955pabpn110097.727ENSDARG00000045373pabpn110097.273Danio_rerio
ENSNBRG00000023955pabpn19482.143ENSDNOG00000023682PABPN18270.238Dasypus_novemcinctus
ENSNBRG00000023955pabpn19480.952ENSDORG00000028966-8269.444Dipodomys_ordii
ENSNBRG00000023955pabpn17482.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSNBRG00000023955pabpn110062.712FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSNBRG00000023955pabpn110080.791ENSEBUG00000002322pabpn19672.000Eptatretus_burgeri
ENSNBRG00000023955pabpn19482.143ENSEASG00005011716PABPN18270.238Equus_asinus_asinus
ENSNBRG00000023955pabpn19381.325ENSECAG00000011652PABPN18570.356Equus_caballus
ENSNBRG00000023955pabpn19479.167ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSNBRG00000023955pabpn110096.045ENSELUG00000022654pabpn19594.667Esox_lucius
ENSNBRG00000023955pabpn19482.143ENSFCAG00000031922PABPN18270.238Felis_catus
ENSNBRG00000023955pabpn19482.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSNBRG00000023955pabpn19494.545ENSFHEG00000007215pabpn19596.364Fundulus_heteroclitus
ENSNBRG00000023955pabpn110092.632ENSGMOG00000003922pabpn110095.088Gadus_morhua
ENSNBRG00000023955pabpn19480.000ENSGALG00000052930-5784.021Gallus_gallus
ENSNBRG00000023955pabpn110097.753ENSGAFG00000017099pabpn19597.748Gambusia_affinis
ENSNBRG00000023955pabpn110097.535ENSGACG00000002167pabpn110097.535Gasterosteus_aculeatus
ENSNBRG00000023955pabpn19469.643ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSNBRG00000023955pabpn19466.867ENSGGOG00000039675-8765.217Gorilla_gorilla
ENSNBRG00000023955pabpn19482.143ENSGGOG00000022683-7976.018Gorilla_gorilla
ENSNBRG00000023955pabpn1100100.000ENSHBUG00000019523pabpn195100.000Haplochromis_burtoni
ENSNBRG00000023955pabpn19368.675ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSNBRG00000023955pabpn19464.671ENSHGLG00000009842-9364.671Heterocephalus_glaber_female
ENSNBRG00000023955pabpn19481.548ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSNBRG00000023955pabpn19469.767ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSNBRG00000023955pabpn19481.548ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSNBRG00000023955pabpn19368.675ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSNBRG00000023955pabpn110097.159ENSHCOG00000004655pabpn19598.636Hippocampus_comes
ENSNBRG00000023955pabpn110096.591ENSIPUG00000008085PABPN19597.273Ictalurus_punctatus
ENSNBRG00000023955pabpn19492.727ENSIPUG00000000180-9986.147Ictalurus_punctatus
ENSNBRG00000023955pabpn19482.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSNBRG00000023955pabpn19482.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSNBRG00000023955pabpn110097.895ENSKMAG00000018748pabpn110097.895Kryptolebias_marmoratus
ENSNBRG00000023955pabpn110098.944ENSLBEG00000027266pabpn110098.944Labrus_bergylta
ENSNBRG00000023955pabpn18785.897ENSLACG00000000646pabpn18584.021Latimeria_chalumnae
ENSNBRG00000023955pabpn110066.102ENSLOCG00000004694pabpn1l9366.337Lepisosteus_oculatus
ENSNBRG00000023955pabpn110092.281ENSLOCG00000000796pabpn110092.632Lepisosteus_oculatus
ENSNBRG00000023955pabpn18682.237ENSLAFG00000031227-10082.237Loxodonta_africana
ENSNBRG00000023955pabpn19482.143ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSNBRG00000023955pabpn18075.352ENSMFAG00000031355-9975.352Macaca_fascicularis
ENSNBRG00000023955pabpn18574.000ENSMMUG00000048382-8558.755Macaca_mulatta
ENSNBRG00000023955pabpn19482.143ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSNBRG00000023955pabpn19468.639ENSMNEG00000035750-9975.352Macaca_nemestrina
ENSNBRG00000023955pabpn19482.143ENSMNEG00000045065BCL2L2-PABPN17976.018Macaca_nemestrina
ENSNBRG00000023955pabpn19482.143ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSNBRG00000023955pabpn19467.066ENSMLEG00000034623-9973.239Mandrillus_leucophaeus
ENSNBRG00000023955pabpn110097.535ENSMAMG00000007979pabpn110097.535Mastacembelus_armatus
ENSNBRG00000023955pabpn110099.648ENSMZEG00005011904pabpn110099.648Maylandia_zebra
ENSNBRG00000023955pabpn19481.548ENSMAUG00000007383Gm205218369.721Mesocricetus_auratus
ENSNBRG00000023955pabpn19482.143ENSMICG00000010002BCL2L2-PABPN17976.786Microcebus_murinus
ENSNBRG00000023955pabpn19480.952ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSNBRG00000023955pabpn110099.432ENSMMOG00000005405pabpn110099.296Mola_mola
ENSNBRG00000023955pabpn19278.049ENSMODG00000004535-8269.841Monodelphis_domestica
ENSNBRG00000023955pabpn110098.592ENSMALG00000019612pabpn110098.592Monopterus_albus
ENSNBRG00000023955pabpn19480.357MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSNBRG00000023955pabpn19480.357MGP_CAROLIEiJ_G0019276Gm205216671.041Mus_caroli
ENSNBRG00000023955pabpn19480.952ENSMUSG00000092232Gm205216671.493Mus_musculus
ENSNBRG00000023955pabpn19480.952ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSNBRG00000023955pabpn19480.952MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSNBRG00000023955pabpn19480.952MGP_PahariEiJ_G0030294Gm205216671.493Mus_pahari
ENSNBRG00000023955pabpn19480.952MGP_SPRETEiJ_G0020165Gm205216671.493Mus_spretus
ENSNBRG00000023955pabpn19480.952MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSNBRG00000023955pabpn18782.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSNBRG00000023955pabpn110083.240ENSMLUG00000003800-9483.146Myotis_lucifugus
ENSNBRG00000023955pabpn19480.473ENSMLUG00000012452-7870.417Myotis_lucifugus
ENSNBRG00000023955pabpn19480.357ENSMLUG00000028677-8072.768Myotis_lucifugus
ENSNBRG00000023955pabpn19482.143ENSNGAG00000019529Gm205216672.398Nannospalax_galili
ENSNBRG00000023955pabpn19482.143ENSNLEG00000015007-7082.234Nomascus_leucogenys
ENSNBRG00000023955pabpn18460.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSNBRG00000023955pabpn19166.871ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSNBRG00000023955pabpn19481.548ENSODEG00000002083BCL2L2-PABPN16481.726Octodon_degus
ENSNBRG00000023955pabpn110072.626ENSODEG00000011555-8971.429Octodon_degus
ENSNBRG00000023955pabpn19472.121ENSODEG00000003739-8364.463Octodon_degus
ENSNBRG00000023955pabpn1100100.000ENSONIG00000008112pabpn1100100.000Oreochromis_niloticus
ENSNBRG00000023955pabpn18384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSNBRG00000023955pabpn19481.548ENSOCUG00000016174PABPN19069.721Oryctolagus_cuniculus
ENSNBRG00000023955pabpn110098.239ENSORLG00000027900pabpn110098.239Oryzias_latipes
ENSNBRG00000023955pabpn19898.844ENSORLG00020004681pabpn110095.548Oryzias_latipes_hni
ENSNBRG00000023955pabpn110099.432ENSORLG00015000018pabpn110095.548Oryzias_latipes_hsok
ENSNBRG00000023955pabpn110098.239ENSOMEG00000016618pabpn110098.239Oryzias_melastigma
ENSNBRG00000023955pabpn19482.143ENSOGAG00000008710PABPN18270.238Otolemur_garnettii
ENSNBRG00000023955pabpn19482.143ENSOARG00000019336BCL2L2-PABPN16171.946Ovis_aries
ENSNBRG00000023955pabpn19482.143ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSNBRG00000023955pabpn19467.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSNBRG00000023955pabpn19482.143ENSPPRG00000010567PABPN18270.238Panthera_pardus
ENSNBRG00000023955pabpn19482.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSNBRG00000023955pabpn19482.143ENSPTRG00000006167BCL2L27976.018Pan_troglodytes
ENSNBRG00000023955pabpn19464.458ENSPTRG00000047273-8959.917Pan_troglodytes
ENSNBRG00000023955pabpn19482.143ENSPANG00000021100BCL2L2-PABPN17976.018Papio_anubis
ENSNBRG00000023955pabpn19470.659ENSPANG00000023326-9976.056Papio_anubis
ENSNBRG00000023955pabpn110097.159ENSPKIG00000008144-10096.127Paramormyrops_kingsleyae
ENSNBRG00000023955pabpn18070.922ENSPKIG00000008340pabpn1l8666.480Paramormyrops_kingsleyae
ENSNBRG00000023955pabpn110088.811ENSPKIG00000018052pabpn110091.608Paramormyrops_kingsleyae
ENSNBRG00000023955pabpn17677.612ENSPSIG00000011959-9181.301Pelodiscus_sinensis
ENSNBRG00000023955pabpn110092.606ENSPMGG00000022027pabpn110092.606Periophthalmus_magnuspinnatus
ENSNBRG00000023955pabpn19481.548ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSNBRG00000023955pabpn17387.500ENSPMAG00000006212pabpn19469.565Petromyzon_marinus
ENSNBRG00000023955pabpn19479.042ENSPCIG00000027751-8269.841Phascolarctos_cinereus
ENSNBRG00000023955pabpn110096.629ENSPFOG00000010351pabpn110094.218Poecilia_formosa
ENSNBRG00000023955pabpn110097.552ENSPLAG00000022696pabpn110097.552Poecilia_latipinna
ENSNBRG00000023955pabpn110096.629ENSPMEG00000020856pabpn19596.396Poecilia_mexicana
ENSNBRG00000023955pabpn110097.203ENSPREG00000011278pabpn110097.203Poecilia_reticulata
ENSNBRG00000023955pabpn18782.051ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSNBRG00000023955pabpn18465.584ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSNBRG00000023955pabpn19482.143ENSPCOG00000028047BCL2L2-PABPN17976.786Propithecus_coquereli
ENSNBRG00000023955pabpn19481.548ENSPVAG00000005270PABPN18269.323Pteropus_vampyrus
ENSNBRG00000023955pabpn1100100.000ENSPNYG00000013182pabpn195100.000Pundamilia_nyererei
ENSNBRG00000023955pabpn110062.921ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSNBRG00000023955pabpn110097.727ENSPNAG00000023526pabpn19996.479Pygocentrus_nattereri
ENSNBRG00000023955pabpn19481.548ENSRNOG00000042195Pabpn18170.000Rattus_norvegicus
ENSNBRG00000023955pabpn19471.687ENSRBIG00000039547-7866.509Rhinopithecus_bieti
ENSNBRG00000023955pabpn19469.643ENSRBIG00000042811-8770.732Rhinopithecus_bieti
ENSNBRG00000023955pabpn18782.051ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSNBRG00000023955pabpn19482.143ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSNBRG00000023955pabpn19472.289ENSRROG00000040409-7866.509Rhinopithecus_roxellana
ENSNBRG00000023955pabpn19465.294ENSRROG00000036409-6167.662Rhinopithecus_roxellana
ENSNBRG00000023955pabpn19476.243ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSNBRG00000023955pabpn19479.042ENSSHAG00000014841-8183.708Sarcophilus_harrisii
ENSNBRG00000023955pabpn110067.598ENSSHAG00000007707-9462.389Sarcophilus_harrisii
ENSNBRG00000023955pabpn19495.152ENSSFOG00015014718pabpn19596.364Scleropages_formosus
ENSNBRG00000023955pabpn17371.875ENSSFOG00015015833pabpn1l8466.304Scleropages_formosus
ENSNBRG00000023955pabpn110089.474ENSSFOG00015012565pabpn110089.474Scleropages_formosus
ENSNBRG00000023955pabpn110098.864ENSSMAG00000020157pabpn110098.592Scophthalmus_maximus
ENSNBRG00000023955pabpn110098.944ENSSDUG00000020582pabpn110098.944Seriola_dumerili
ENSNBRG00000023955pabpn110098.864ENSSLDG00000007118pabpn19599.091Seriola_lalandi_dorsalis
ENSNBRG00000023955pabpn19483.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSNBRG00000023955pabpn110098.596ENSSPAG00000021658pabpn110098.596Stegastes_partitus
ENSNBRG00000023955pabpn19482.143ENSSSCG00000002023PABPN18270.238Sus_scrofa
ENSNBRG00000023955pabpn15766.990ENSSSCG00000038472-6667.021Sus_scrofa
ENSNBRG00000023955pabpn19964.607ENSSSCG00000034805-7561.905Sus_scrofa
ENSNBRG00000023955pabpn110097.535ENSTRUG00000023664pabpn110097.535Takifugu_rubripes
ENSNBRG00000023955pabpn19490.964ENSTNIG00000005369pabpn19397.015Tetraodon_nigroviridis
ENSNBRG00000023955pabpn19482.143ENSUAMG00000024460PABPN16482.234Ursus_americanus
ENSNBRG00000023955pabpn19482.143ENSUMAG00000014288BCL2L2-PABPN16671.946Ursus_maritimus
ENSNBRG00000023955pabpn19482.143ENSVVUG00000019912BCL2L2-PABPN17182.967Vulpes_vulpes
ENSNBRG00000023955pabpn19484.431ENSXETG00000014597pabpn16982.353Xenopus_tropicalis
ENSNBRG00000023955pabpn19787.209ENSXCOG00000005158pabpn19887.209Xiphophorus_couchianus
ENSNBRG00000023955pabpn110097.191ENSXMAG00000006196pabpn110094.898Xiphophorus_maculatus

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