EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000024004 (Gene tree)
Gene ID: 102785079
Gene Symbol: shq1
Alias: zgc:158255
Full Name: protein SHQ1 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 40927 bases
Position: chrJH422279.1:13814133-13855059
Accession: 102785079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031584	SHQ1	PF04925.15	3.8e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032383	-	2204	XM_006784751	ENSNBRP00000031584	512 (aa)	XP_006784814	-

Gene Model

Click here to download ENSNBRG00000024004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000024004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000024004	shq1	62	59.756	ENSG00000144736	SHQ1	100	57.391	Homo_sapiens
ENSNBRG00000024004	shq1	100	75.862	ENSAPOG00000000397	shq1	85	75.479	Acanthochromis_polyacanthus
ENSNBRG00000024004	shq1	90	47.433	ENSAMEG00000015140	SHQ1	60	58.166	Ailuropoda_melanoleuca
ENSNBRG00000024004	shq1	100	83.495	ENSACIG00000021249	shq1	85	83.689	Amphilophus_citrinellus
ENSNBRG00000024004	shq1	100	76.190	ENSAOCG00000023311	shq1	86	75.810	Amphiprion_ocellaris
ENSNBRG00000024004	shq1	100	76.200	ENSAPEG00000021686	shq1	85	75.816	Amphiprion_percula
ENSNBRG00000024004	shq1	98	71.429	ENSATEG00000008475	shq1	84	71.068	Anabas_testudineus
ENSNBRG00000024004	shq1	63	56.024	ENSAPLG00000013926	SHQ1	70	55.833	Anas_platyrhynchos
ENSNBRG00000024004	shq1	65	59.064	ENSACAG00000014809	SHQ1	53	58.824	Anolis_carolinensis
ENSNBRG00000024004	shq1	75	55.330	ENSANAG00000029241	SHQ1	61	58.263	Aotus_nancymaae
ENSNBRG00000024004	shq1	74	41.099	ENSANAG00000030500	-	60	43.391	Aotus_nancymaae
ENSNBRG00000024004	shq1	100	98.246	ENSACLG00000023077	shq1	82	98.246	Astatotilapia_calliptera
ENSNBRG00000024004	shq1	77	56.683	ENSBTAG00000005436	SHQ1	61	58.496	Bos_taurus
ENSNBRG00000024004	shq1	62	59.146	ENSCJAG00000015131	SHQ1	61	58.263	Callithrix_jacchus
ENSNBRG00000024004	shq1	59	59.032	ENSCAFG00000006434	SHQ1	61	59.218	Canis_familiaris
ENSNBRG00000024004	shq1	59	59.355	ENSCAFG00020016743	SHQ1	64	59.497	Canis_lupus_dingo
ENSNBRG00000024004	shq1	93	50.202	ENSCHIG00000012271	SHQ1	74	51.452	Capra_hircus
ENSNBRG00000024004	shq1	62	55.247	ENSTSYG00000014439	SHQ1	66	54.520	Carlito_syrichta
ENSNBRG00000024004	shq1	90	45.992	ENSCAPG00000009343	SHQ1	63	53.824	Cavia_aperea
ENSNBRG00000024004	shq1	70	56.712	ENSCPOG00000011443	SHQ1	59	58.621	Cavia_porcellus
ENSNBRG00000024004	shq1	55	60.274	ENSCCAG00000027080	SHQ1	59	58.730	Cebus_capucinus
ENSNBRG00000024004	shq1	74	44.531	ENSCCAG00000036087	-	61	46.571	Cebus_capucinus
ENSNBRG00000024004	shq1	62	60.671	ENSCATG00000041238	SHQ1	64	59.664	Cercocebus_atys
ENSNBRG00000024004	shq1	68	57.865	ENSCLAG00000004206	SHQ1	61	57.983	Chinchilla_lanigera
ENSNBRG00000024004	shq1	62	60.061	ENSCSAG00000011514	SHQ1	72	59.104	Chlorocebus_sabaeus
ENSNBRG00000024004	shq1	98	46.617	ENSCPBG00000006441	SHQ1	57	58.357	Chrysemys_picta_bellii
ENSNBRG00000024004	shq1	59	41.830	ENSCING00000008013	-	77	39.660	Ciona_intestinalis
ENSNBRG00000024004	shq1	59	38.944	ENSCSAVG00000002332	-	65	42.254	Ciona_savignyi
ENSNBRG00000024004	shq1	76	54.321	ENSCANG00000039295	SHQ1	61	59.384	Colobus_angolensis_palliatus
ENSNBRG00000024004	shq1	68	57.983	ENSCGRG00001012583	Shq1	62	57.022	Cricetulus_griseus_chok1gshd
ENSNBRG00000024004	shq1	68	57.983	ENSCGRG00000009849	Shq1	62	57.022	Cricetulus_griseus_crigri
ENSNBRG00000024004	shq1	98	66.346	ENSCSEG00000007829	shq1	84	66.538	Cynoglossus_semilaevis
ENSNBRG00000024004	shq1	98	67.850	ENSCVAG00000020049	shq1	84	68.379	Cyprinodon_variegatus
ENSNBRG00000024004	shq1	98	49.126	ENSDARG00000058522	shq1	83	47.925	Danio_rerio
ENSNBRG00000024004	shq1	90	49.480	ENSDNOG00000033937	SHQ1	60	59.026	Dasypus_novemcinctus
ENSNBRG00000024004	shq1	62	50.915	ENSETEG00000005766	SHQ1	60	49.857	Echinops_telfairi
ENSNBRG00000024004	shq1	72	47.733	ENSEBUG00000005445	shq1	79	48.295	Eptatretus_burgeri
ENSNBRG00000024004	shq1	69	58.611	ENSEASG00005002237	SHQ1	61	58.989	Equus_asinus_asinus
ENSNBRG00000024004	shq1	69	58.611	ENSECAG00000015673	SHQ1	60	58.989	Equus_caballus
ENSNBRG00000024004	shq1	67	59.040	ENSEEUG00000010568	SHQ1	61	59.155	Erinaceus_europaeus
ENSNBRG00000024004	shq1	97	57.594	ENSELUG00000003476	shq1	84	58.221	Esox_lucius
ENSNBRG00000024004	shq1	75	55.471	ENSFCAG00000012781	SHQ1	61	58.873	Felis_catus
ENSNBRG00000024004	shq1	98	48.417	ENSFALG00000013428	SHQ1	57	61.560	Ficedula_albicollis
ENSNBRG00000024004	shq1	62	58.232	ENSFDAG00000005595	SHQ1	53	57.880	Fukomys_damarensis
ENSNBRG00000024004	shq1	98	67.921	ENSFHEG00000017552	shq1	85	67.061	Fundulus_heteroclitus
ENSNBRG00000024004	shq1	59	73.333	ENSGMOG00000007350	shq1	77	72.667	Gadus_morhua
ENSNBRG00000024004	shq1	98	45.936	ENSGALG00000007798	SHQ1	56	58.790	Gallus_gallus
ENSNBRG00000024004	shq1	59	79.000	ENSGACG00000011797	shq1	77	78.667	Gasterosteus_aculeatus
ENSNBRG00000024004	shq1	62	59.756	ENSGGOG00000034818	SHQ1	64	58.824	Gorilla_gorilla
ENSNBRG00000024004	shq1	100	98.633	ENSHBUG00000010857	shq1	85	98.633	Haplochromis_burtoni
ENSNBRG00000024004	shq1	90	47.677	ENSHGLG00000003637	SHQ1	54	58.453	Heterocephalus_glaber_female
ENSNBRG00000024004	shq1	90	47.870	ENSHGLG00100011957	SHQ1	54	58.453	Heterocephalus_glaber_male
ENSNBRG00000024004	shq1	98	60.630	ENSHCOG00000010799	shq1	83	60.158	Hippocampus_comes
ENSNBRG00000024004	shq1	93	52.401	ENSIPUG00000001247	shq1	75	52.431	Ictalurus_punctatus
ENSNBRG00000024004	shq1	63	57.273	ENSSTOG00000010043	SHQ1	65	55.182	Ictidomys_tridecemlineatus
ENSNBRG00000024004	shq1	62	59.633	ENSJJAG00000017611	Shq1	61	59.195	Jaculus_jaculus
ENSNBRG00000024004	shq1	100	68.544	ENSKMAG00000004457	shq1	85	68.350	Kryptolebias_marmoratus
ENSNBRG00000024004	shq1	67	59.943	ENSLACG00000014243	SHQ1	52	59.943	Latimeria_chalumnae
ENSNBRG00000024004	shq1	97	51.589	ENSLOCG00000009970	shq1	85	51.667	Lepisosteus_oculatus
ENSNBRG00000024004	shq1	62	60.366	ENSMFAG00000039148	SHQ1	64	59.384	Macaca_fascicularis
ENSNBRG00000024004	shq1	62	60.366	ENSMMUG00000009571	SHQ1	64	59.384	Macaca_mulatta
ENSNBRG00000024004	shq1	62	60.366	ENSMNEG00000032667	SHQ1	61	59.384	Macaca_nemestrina
ENSNBRG00000024004	shq1	62	60.366	ENSMLEG00000038493	SHQ1	61	59.384	Mandrillus_leucophaeus
ENSNBRG00000024004	shq1	98	73.755	ENSMAMG00000023432	shq1	81	73.180	Mastacembelus_armatus
ENSNBRG00000024004	shq1	100	98.438	ENSMZEG00005008649	shq1	85	98.438	Maylandia_zebra
ENSNBRG00000024004	shq1	68	57.660	ENSMGAG00000009640	SHQ1	57	58.621	Meleagris_gallopavo
ENSNBRG00000024004	shq1	68	58.263	ENSMAUG00000022030	Shq1	62	57.303	Mesocricetus_auratus
ENSNBRG00000024004	shq1	93	46.707	ENSMICG00000009224	SHQ1	66	58.611	Microcebus_murinus
ENSNBRG00000024004	shq1	75	56.378	ENSMOCG00000017836	Shq1	63	56.863	Microtus_ochrogaster
ENSNBRG00000024004	shq1	98	66.863	ENSMMOG00000010569	shq1	85	66.471	Mola_mola
ENSNBRG00000024004	shq1	75	54.364	ENSMODG00000003926	SHQ1	62	58.166	Monodelphis_domestica
ENSNBRG00000024004	shq1	99	72.320	ENSMALG00000008870	shq1	84	71.930	Monopterus_albus
ENSNBRG00000024004	shq1	75	54.987	MGP_CAROLIEiJ_G0028689	Shq1	62	56.461	Mus_caroli
ENSNBRG00000024004	shq1	75	54.731	ENSMUSG00000035378	Shq1	62	56.461	Mus_musculus
ENSNBRG00000024004	shq1	70	55.858	MGP_PahariEiJ_G0022440	Shq1	62	56.583	Mus_pahari
ENSNBRG00000024004	shq1	75	54.987	MGP_SPRETEiJ_G0029717	Shq1	62	56.742	Mus_spretus
ENSNBRG00000024004	shq1	94	47.984	ENSMPUG00000017006	SHQ1	60	57.865	Mustela_putorius_furo
ENSNBRG00000024004	shq1	93	48.276	ENSMLUG00000013539	SHQ1	69	56.216	Myotis_lucifugus
ENSNBRG00000024004	shq1	74	45.714	ENSNGAG00000023317	Shq1	60	49.003	Nannospalax_galili
ENSNBRG00000024004	shq1	76	54.815	ENSNLEG00000002731	SHQ1	64	59.104	Nomascus_leucogenys
ENSNBRG00000024004	shq1	58	41.801	ENSMEUG00000009350	-	50	44.444	Notamacropus_eugenii
ENSNBRG00000024004	shq1	70	56.831	ENSODEG00000009192	SHQ1	65	57.983	Octodon_degus
ENSNBRG00000024004	shq1	99	96.875	ENSONIG00000020264	shq1	85	96.875	Oreochromis_niloticus
ENSNBRG00000024004	shq1	94	49.503	ENSOCUG00000016695	SHQ1	60	59.384	Oryctolagus_cuniculus
ENSNBRG00000024004	shq1	98	61.980	ENSORLG00000023538	shq1	82	60.990	Oryzias_latipes
ENSNBRG00000024004	shq1	98	62.574	ENSORLG00020003697	shq1	83	61.584	Oryzias_latipes_hni
ENSNBRG00000024004	shq1	98	61.386	ENSORLG00015021040	shq1	82	60.594	Oryzias_latipes_hsok
ENSNBRG00000024004	shq1	94	64.742	ENSOMEG00000001225	shq1	79	64.271	Oryzias_melastigma
ENSNBRG00000024004	shq1	74	55.013	ENSOGAG00000003898	SHQ1	62	58.263	Otolemur_garnettii
ENSNBRG00000024004	shq1	62	59.091	ENSOARG00000009547	SHQ1	82	50.826	Ovis_aries
ENSNBRG00000024004	shq1	73	47.244	ENSPPAG00000043263	-	62	49.850	Pan_paniscus
ENSNBRG00000024004	shq1	62	60.061	ENSPPAG00000027714	SHQ1	64	59.104	Pan_paniscus
ENSNBRG00000024004	shq1	93	48.703	ENSPPRG00000004769	SHQ1	61	58.873	Panthera_pardus
ENSNBRG00000024004	shq1	91	47.737	ENSPTIG00000011478	SHQ1	60	57.817	Panthera_tigris_altaica
ENSNBRG00000024004	shq1	62	60.061	ENSPTRG00000015106	SHQ1	64	59.104	Pan_troglodytes
ENSNBRG00000024004	shq1	73	46.053	ENSPTRG00000048303	-	61	48.494	Pan_troglodytes
ENSNBRG00000024004	shq1	62	59.327	ENSPANG00000002881	SHQ1	64	59.664	Papio_anubis
ENSNBRG00000024004	shq1	99	51.550	ENSPKIG00000021517	shq1	60	64.244	Paramormyrops_kingsleyae
ENSNBRG00000024004	shq1	66	57.307	ENSPSIG00000005536	SHQ1	57	57.790	Pelodiscus_sinensis
ENSNBRG00000024004	shq1	97	57.430	ENSPMGG00000008838	shq1	83	56.040	Periophthalmus_magnuspinnatus
ENSNBRG00000024004	shq1	59	59.486	ENSPEMG00000000251	Shq1	61	56.897	Peromyscus_maniculatus_bairdii
ENSNBRG00000024004	shq1	67	54.830	ENSPMAG00000005372	shq1	79	54.261	Petromyzon_marinus
ENSNBRG00000024004	shq1	90	66.452	ENSPFOG00000003118	shq1	82	67.382	Poecilia_formosa
ENSNBRG00000024004	shq1	90	66.739	ENSPMEG00000011076	shq1	98	67.160	Poecilia_mexicana
ENSNBRG00000024004	shq1	89	66.376	ENSPREG00000000591	shq1	84	66.667	Poecilia_reticulata
ENSNBRG00000024004	shq1	75	54.545	ENSPPYG00000013717	SHQ1	61	58.824	Pongo_abelii
ENSNBRG00000024004	shq1	63	59.517	ENSPCAG00000009035	SHQ1	62	58.824	Procavia_capensis
ENSNBRG00000024004	shq1	62	60.061	ENSPCOG00000008415	SHQ1	61	59.104	Propithecus_coquereli
ENSNBRG00000024004	shq1	90	48.765	ENSPVAG00000017392	SHQ1	61	58.146	Pteropus_vampyrus
ENSNBRG00000024004	shq1	100	98.246	ENSPNYG00000003878	shq1	85	98.246	Pundamilia_nyererei
ENSNBRG00000024004	shq1	97	53.462	ENSPNAG00000026840	shq1	83	53.448	Pygocentrus_nattereri
ENSNBRG00000024004	shq1	68	58.217	ENSRNOG00000005433	Shq1	68	57.303	Rattus_norvegicus
ENSNBRG00000024004	shq1	78	50.732	ENSRBIG00000026280	SHQ1	64	57.143	Rhinopithecus_bieti
ENSNBRG00000024004	shq1	78	53.237	ENSRROG00000034126	SHQ1	61	59.944	Rhinopithecus_roxellana
ENSNBRG00000024004	shq1	55	59.932	ENSSBOG00000021038	SHQ1	59	58.413	Saimiri_boliviensis_boliviensis
ENSNBRG00000024004	shq1	66	59.599	ENSSHAG00000015077	SHQ1	62	59.322	Sarcophilus_harrisii
ENSNBRG00000024004	shq1	98	54.274	ENSSFOG00015016241	shq1	83	54.473	Scleropages_formosus
ENSNBRG00000024004	shq1	98	71.540	ENSSMAG00000016151	shq1	84	70.760	Scophthalmus_maximus
ENSNBRG00000024004	shq1	100	72.328	ENSSDUG00000011986	shq1	84	73.256	Seriola_dumerili
ENSNBRG00000024004	shq1	100	71.702	ENSSLDG00000013908	shq1	84	72.427	Seriola_lalandi_dorsalis
ENSNBRG00000024004	shq1	100	48.218	ENSSPUG00000011526	-	65	59.259	Sphenodon_punctatus
ENSNBRG00000024004	shq1	77	54.863	ENSSSCG00000011518	SHQ1	60	58.357	Sus_scrofa
ENSNBRG00000024004	shq1	62	61.934	ENSTGUG00000009933	SHQ1	61	61.064	Taeniopygia_guttata
ENSNBRG00000024004	shq1	98	63.564	ENSTRUG00000009446	shq1	84	63.636	Takifugu_rubripes
ENSNBRG00000024004	shq1	73	66.755	ENSTNIG00000007354	shq1	77	70.605	Tetraodon_nigroviridis
ENSNBRG00000024004	shq1	67	58.192	ENSTTRG00000005320	SHQ1	61	58.310	Tursiops_truncatus
ENSNBRG00000024004	shq1	92	47.951	ENSUMAG00000024031	SHQ1	58	58.529	Ursus_maritimus
ENSNBRG00000024004	shq1	81	50.115	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSNBRG00000024004	shq1	59	59.032	ENSVVUG00000013906	SHQ1	61	58.543	Vulpes_vulpes
ENSNBRG00000024004	shq1	99	46.503	ENSXETG00000032215	shq1	56	57.514	Xenopus_tropicalis