EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000024007 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome complex component CSL4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4912 bases
Position: chrJH422291.1:4894488-4899399
Accession: 102780305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000031590	ECR1_N	PF14382.6	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032389	-	465	XM_006790732	ENSNBRP00000031590	154 (aa)	XP_006790795	-

Gene Model

Click here to download ENSNBRG00000024007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000024007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000024007	exosc1	97	78.000	ENSG00000171311	EXOSC1	91	78.000	Homo_sapiens
ENSNBRG00000024007	exosc1	99	77.320	ENSAPOG00000007822	exosc1	100	77.320	Acanthochromis_polyacanthus
ENSNBRG00000024007	exosc1	97	61.257	ENSAMEG00000000129	EXOSC1	98	61.257	Ailuropoda_melanoleuca
ENSNBRG00000024007	exosc1	94	77.297	ENSACIG00000018956	exosc1	91	77.297	Amphilophus_citrinellus
ENSNBRG00000024007	exosc1	99	77.320	ENSAOCG00000010699	exosc1	100	77.320	Amphiprion_ocellaris
ENSNBRG00000024007	exosc1	90	77.640	ENSAPEG00000012690	exosc1	97	77.640	Amphiprion_percula
ENSNBRG00000024007	exosc1	100	98.701	ENSATEG00000018683	exosc1	100	98.701	Anabas_testudineus
ENSNBRG00000024007	exosc1	99	57.732	ENSACAG00000002101	EXOSC1	99	57.732	Anolis_carolinensis
ENSNBRG00000024007	exosc1	97	77.333	ENSANAG00000034669	EXOSC1	97	77.333	Aotus_nancymaae
ENSNBRG00000024007	exosc1	93	100.000	ENSACLG00000021243	exosc1	95	100.000	Astatotilapia_calliptera
ENSNBRG00000024007	exosc1	100	92.857	ENSAMXG00000011116	exosc1	100	92.857	Astyanax_mexicanus
ENSNBRG00000024007	exosc1	98	61.579	ENSBTAG00000012699	EXOSC1	98	61.579	Bos_taurus
ENSNBRG00000024007	exosc1	97	77.333	ENSCJAG00000016586	EXOSC1	97	77.333	Callithrix_jacchus
ENSNBRG00000024007	exosc1	98	60.417	ENSCAFG00000009068	EXOSC1	93	60.417	Canis_familiaris
ENSNBRG00000024007	exosc1	98	60.417	ENSCAFG00020006002	EXOSC1	93	60.417	Canis_lupus_dingo
ENSNBRG00000024007	exosc1	97	61.257	ENSCHIG00000015253	EXOSC1	98	61.257	Capra_hircus
ENSNBRG00000024007	exosc1	97	76.000	ENSTSYG00000000760	EXOSC1	97	76.000	Carlito_syrichta
ENSNBRG00000024007	exosc1	98	76.821	ENSCPOG00000001173	EXOSC1	98	76.821	Cavia_porcellus
ENSNBRG00000024007	exosc1	97	43.312	ENSCCAG00000023986	EXOSC1	97	43.312	Cebus_capucinus
ENSNBRG00000024007	exosc1	97	78.000	ENSCATG00000034114	EXOSC1	97	78.000	Cercocebus_atys
ENSNBRG00000024007	exosc1	97	77.333	ENSCLAG00000002463	EXOSC1	97	77.333	Chinchilla_lanigera
ENSNBRG00000024007	exosc1	97	60.733	ENSCSAG00000005870	EXOSC1	98	60.733	Chlorocebus_sabaeus
ENSNBRG00000024007	exosc1	98	40.415	ENSCING00000022734	-	92	40.415	Ciona_intestinalis
ENSNBRG00000024007	exosc1	98	44.041	ENSCSAVG00000010865	-	98	44.041	Ciona_savignyi
ENSNBRG00000024007	exosc1	97	78.000	ENSCANG00000034159	EXOSC1	97	78.000	Colobus_angolensis_palliatus
ENSNBRG00000024007	exosc1	97	76.667	ENSCGRG00001000335	Exosc1	97	76.667	Cricetulus_griseus_chok1gshd
ENSNBRG00000024007	exosc1	97	76.667	ENSCGRG00000011602	Exosc1	97	76.667	Cricetulus_griseus_crigri
ENSNBRG00000024007	exosc1	100	74.854	ENSCSEG00000007895	exosc1	97	74.854	Cynoglossus_semilaevis
ENSNBRG00000024007	exosc1	100	71.508	ENSCVAG00000016748	exosc1	100	71.508	Cyprinodon_variegatus
ENSNBRG00000024007	exosc1	99	73.711	ENSDARG00000059841	exosc1	100	73.711	Danio_rerio
ENSNBRG00000024007	exosc1	67	51.034	ENSDNOG00000007983	EXOSC1	98	51.034	Dasypus_novemcinctus
ENSNBRG00000024007	exosc1	97	76.667	ENSDORG00000016528	Exosc1	97	76.667	Dipodomys_ordii
ENSNBRG00000024007	exosc1	94	37.368	FBgn0032346	Csl4	92	37.368	Drosophila_melanogaster
ENSNBRG00000024007	exosc1	97	59.686	ENSETEG00000002469	-	98	59.686	Echinops_telfairi
ENSNBRG00000024007	exosc1	96	51.562	ENSEBUG00000008164	exosc1	96	51.562	Eptatretus_burgeri
ENSNBRG00000024007	exosc1	97	55.978	ENSEASG00005008684	EXOSC1	98	55.978	Equus_asinus_asinus
ENSNBRG00000024007	exosc1	97	59.686	ENSEEUG00000005647	EXOSC1	98	59.686	Erinaceus_europaeus
ENSNBRG00000024007	exosc1	100	72.941	ENSELUG00000017369	exosc1	100	72.941	Esox_lucius
ENSNBRG00000024007	exosc1	97	61.714	ENSFCAG00000040563	EXOSC1	98	61.714	Felis_catus
ENSNBRG00000024007	exosc1	97	59.686	ENSFALG00000008450	EXOSC1	98	59.686	Ficedula_albicollis
ENSNBRG00000024007	exosc1	97	61.257	ENSFDAG00000000846	EXOSC1	98	61.257	Fukomys_damarensis
ENSNBRG00000024007	exosc1	99	69.588	ENSFHEG00000009154	exosc1	100	69.588	Fundulus_heteroclitus
ENSNBRG00000024007	exosc1	99	74.227	ENSGMOG00000008993	exosc1	100	74.227	Gadus_morhua
ENSNBRG00000024007	exosc1	97	58.929	ENSGALG00000039917	EXOSC1	99	60.690	Gallus_gallus
ENSNBRG00000024007	exosc1	100	69.744	ENSGAFG00000010265	exosc1	96	69.744	Gambusia_affinis
ENSNBRG00000024007	exosc1	99	73.196	ENSGACG00000018936	exosc1	100	73.196	Gasterosteus_aculeatus
ENSNBRG00000024007	exosc1	97	59.162	ENSGAGG00000019192	EXOSC1	98	59.162	Gopherus_agassizii
ENSNBRG00000024007	exosc1	97	60.479	ENSGGOG00000003099	EXOSC1	98	60.479	Gorilla_gorilla
ENSNBRG00000024007	exosc1	99	78.866	ENSHBUG00000017857	exosc1	100	78.866	Haplochromis_burtoni
ENSNBRG00000024007	exosc1	97	78.000	ENSHGLG00000016927	EXOSC1	97	78.000	Heterocephalus_glaber_female
ENSNBRG00000024007	exosc1	97	78.000	ENSHGLG00100012208	EXOSC1	97	78.000	Heterocephalus_glaber_male
ENSNBRG00000024007	exosc1	99	74.742	ENSHCOG00000019882	exosc1	100	74.742	Hippocampus_comes
ENSNBRG00000024007	exosc1	93	88.811	ENSIPUG00000007685	exosc1	95	88.811	Ictalurus_punctatus
ENSNBRG00000024007	exosc1	50	55.844	ENSSTOG00000029860	-	56	55.844	Ictidomys_tridecemlineatus
ENSNBRG00000024007	exosc1	98	76.159	ENSSTOG00000006615	EXOSC1	98	76.159	Ictidomys_tridecemlineatus
ENSNBRG00000024007	exosc1	97	60.733	ENSJJAG00000013311	Exosc1	98	60.733	Jaculus_jaculus
ENSNBRG00000024007	exosc1	100	73.988	ENSKMAG00000001202	exosc1	82	73.988	Kryptolebias_marmoratus
ENSNBRG00000024007	exosc1	99	81.921	ENSLBEG00000011448	exosc1	100	81.921	Labrus_bergylta
ENSNBRG00000024007	exosc1	99	83.019	ENSLOCG00000003776	exosc1	100	83.019	Lepisosteus_oculatus
ENSNBRG00000024007	exosc1	97	60.733	ENSLAFG00000015983	EXOSC1	98	60.733	Loxodonta_africana
ENSNBRG00000024007	exosc1	97	78.000	ENSMFAG00000001493	EXOSC1	97	78.000	Macaca_fascicularis
ENSNBRG00000024007	exosc1	97	78.000	ENSMMUG00000020028	EXOSC1	97	78.000	Macaca_mulatta
ENSNBRG00000024007	exosc1	97	61.714	ENSMNEG00000029816	EXOSC1	98	61.714	Macaca_nemestrina
ENSNBRG00000024007	exosc1	97	78.000	ENSMLEG00000027643	EXOSC1	97	78.000	Mandrillus_leucophaeus
ENSNBRG00000024007	exosc1	99	76.289	ENSMAMG00000012200	exosc1	100	76.289	Mastacembelus_armatus
ENSNBRG00000024007	exosc1	93	100.000	ENSMZEG00005007042	exosc1	95	100.000	Maylandia_zebra
ENSNBRG00000024007	exosc1	97	59.880	ENSMAUG00000020462	-	98	59.880	Mesocricetus_auratus
ENSNBRG00000024007	exosc1	97	77.333	ENSMICG00000007664	EXOSC1	97	77.333	Microcebus_murinus
ENSNBRG00000024007	exosc1	96	61.413	ENSMOCG00000017124	-	97	61.413	Microtus_ochrogaster
ENSNBRG00000024007	exosc1	97	76.667	ENSMOCG00000006004	-	97	76.667	Microtus_ochrogaster
ENSNBRG00000024007	exosc1	99	92.157	ENSMMOG00000021403	exosc1	100	92.157	Mola_mola
ENSNBRG00000024007	exosc1	98	60.622	ENSMODG00000004213	EXOSC1	98	60.622	Monodelphis_domestica
ENSNBRG00000024007	exosc1	94	74.595	ENSMALG00000007061	exosc1	93	74.595	Monopterus_albus
ENSNBRG00000024007	exosc1	97	76.000	MGP_CAROLIEiJ_G0022959	Exosc1	97	76.000	Mus_caroli
ENSNBRG00000024007	exosc1	97	76.000	ENSMUSG00000034321	Exosc1	97	76.000	Mus_musculus
ENSNBRG00000024007	exosc1	97	76.667	MGP_PahariEiJ_G0014449	Exosc1	97	76.667	Mus_pahari
ENSNBRG00000024007	exosc1	97	76.000	MGP_SPRETEiJ_G0023880	Exosc1	97	76.000	Mus_spretus
ENSNBRG00000024007	exosc1	97	61.257	ENSMPUG00000017044	EXOSC1	98	61.257	Mustela_putorius_furo
ENSNBRG00000024007	exosc1	97	60.733	ENSMLUG00000009228	EXOSC1	98	60.733	Myotis_lucifugus
ENSNBRG00000024007	exosc1	97	59.162	ENSNGAG00000022033	Exosc1	98	59.162	Nannospalax_galili
ENSNBRG00000024007	exosc1	97	78.000	ENSNLEG00000013872	EXOSC1	97	78.000	Nomascus_leucogenys
ENSNBRG00000024007	exosc1	50	59.740	ENSMEUG00000002246	EXOSC1	67	59.740	Notamacropus_eugenii
ENSNBRG00000024007	exosc1	98	60.417	ENSOPRG00000005065	EXOSC1	98	60.417	Ochotona_princeps
ENSNBRG00000024007	exosc1	97	78.000	ENSODEG00000016709	EXOSC1	97	78.000	Octodon_degus
ENSNBRG00000024007	exosc1	100	77.949	ENSONIG00000017683	exosc1	100	77.949	Oreochromis_niloticus
ENSNBRG00000024007	exosc1	57	86.364	ENSOANG00000006563	EXOSC1	70	86.364	Ornithorhynchus_anatinus
ENSNBRG00000024007	exosc1	97	59.375	ENSOCUG00000011898	-	98	59.375	Oryctolagus_cuniculus
ENSNBRG00000024007	exosc1	98	55.729	ENSOCUG00000026461	-	98	55.729	Oryctolagus_cuniculus
ENSNBRG00000024007	exosc1	99	70.769	ENSORLG00000011595	exosc1	100	70.769	Oryzias_latipes
ENSNBRG00000024007	exosc1	99	70.769	ENSORLG00020005831	exosc1	100	70.769	Oryzias_latipes_hni
ENSNBRG00000024007	exosc1	99	70.256	ENSORLG00015004317	exosc1	100	70.256	Oryzias_latipes_hsok
ENSNBRG00000024007	exosc1	100	79.661	ENSOMEG00000013907	exosc1	100	79.661	Oryzias_melastigma
ENSNBRG00000024007	exosc1	97	60.209	ENSOGAG00000016259	EXOSC1	98	60.209	Otolemur_garnettii
ENSNBRG00000024007	exosc1	97	61.257	ENSOARG00000010136	EXOSC1	98	61.257	Ovis_aries
ENSNBRG00000024007	exosc1	97	78.000	ENSPPAG00000039842	EXOSC1	97	78.000	Pan_paniscus
ENSNBRG00000024007	exosc1	97	61.714	ENSPPRG00000023366	EXOSC1	98	61.714	Panthera_pardus
ENSNBRG00000024007	exosc1	97	61.714	ENSPTIG00000017701	EXOSC1	98	61.714	Panthera_tigris_altaica
ENSNBRG00000024007	exosc1	97	78.000	ENSPTRG00000002808	EXOSC1	97	78.000	Pan_troglodytes
ENSNBRG00000024007	exosc1	97	78.000	ENSPANG00000021324	EXOSC1	97	78.000	Papio_anubis
ENSNBRG00000024007	exosc1	100	81.818	ENSPKIG00000016037	exosc1	100	81.818	Paramormyrops_kingsleyae
ENSNBRG00000024007	exosc1	52	88.750	ENSPSIG00000013571	EXOSC1	65	88.750	Pelodiscus_sinensis
ENSNBRG00000024007	exosc1	99	75.882	ENSPMGG00000014002	exosc1	100	75.882	Periophthalmus_magnuspinnatus
ENSNBRG00000024007	exosc1	97	76.667	ENSPEMG00000010710	-	97	76.667	Peromyscus_maniculatus_bairdii
ENSNBRG00000024007	exosc1	94	53.476	ENSPMAG00000000195	exosc1	95	53.476	Petromyzon_marinus
ENSNBRG00000024007	exosc1	98	59.896	ENSPCIG00000002210	EXOSC1	97	59.896	Phascolarctos_cinereus
ENSNBRG00000024007	exosc1	100	69.231	ENSPFOG00000006755	exosc1	96	69.231	Poecilia_formosa
ENSNBRG00000024007	exosc1	99	69.072	ENSPLAG00000005880	exosc1	100	69.072	Poecilia_latipinna
ENSNBRG00000024007	exosc1	100	69.231	ENSPMEG00000015598	exosc1	96	69.231	Poecilia_mexicana
ENSNBRG00000024007	exosc1	100	69.591	ENSPREG00000000405	exosc1	95	69.591	Poecilia_reticulata
ENSNBRG00000024007	exosc1	98	60.938	ENSPPYG00000002531	EXOSC1	98	60.938	Pongo_abelii
ENSNBRG00000024007	exosc1	97	59.686	ENSPCAG00000009135	EXOSC1	98	59.686	Procavia_capensis
ENSNBRG00000024007	exosc1	98	64.444	ENSPCOG00000027539	EXOSC1	98	64.444	Propithecus_coquereli
ENSNBRG00000024007	exosc1	97	60.733	ENSPVAG00000003372	EXOSC1	98	60.733	Pteropus_vampyrus
ENSNBRG00000024007	exosc1	100	79.532	ENSPNYG00000021745	exosc1	100	79.532	Pundamilia_nyererei
ENSNBRG00000024007	exosc1	99	72.165	ENSPNAG00000001944	exosc1	100	72.165	Pygocentrus_nattereri
ENSNBRG00000024007	exosc1	97	76.667	ENSRNOG00000048708	Exosc1	97	76.667	Rattus_norvegicus
ENSNBRG00000024007	exosc1	97	78.000	ENSRBIG00000035618	EXOSC1	97	78.000	Rhinopithecus_bieti
ENSNBRG00000024007	exosc1	97	78.000	ENSRROG00000032589	EXOSC1	97	78.000	Rhinopithecus_roxellana
ENSNBRG00000024007	exosc1	97	61.143	ENSSBOG00000000359	EXOSC1	98	61.143	Saimiri_boliviensis_boliviensis
ENSNBRG00000024007	exosc1	68	63.265	ENSSHAG00000018219	EXOSC1	100	63.265	Sarcophilus_harrisii
ENSNBRG00000024007	exosc1	99	71.134	ENSSFOG00015009069	exosc1	100	71.134	Scleropages_formosus
ENSNBRG00000024007	exosc1	99	70.103	ENSSFOG00015016289	-	100	70.103	Scleropages_formosus
ENSNBRG00000024007	exosc1	100	97.403	ENSSMAG00000003721	exosc1	100	97.403	Scophthalmus_maximus
ENSNBRG00000024007	exosc1	100	75.843	ENSSDUG00000002993	exosc1	100	76.289	Seriola_dumerili
ENSNBRG00000024007	exosc1	100	75.843	ENSSLDG00000025181	exosc1	100	76.289	Seriola_lalandi_dorsalis
ENSNBRG00000024007	exosc1	97	53.927	ENSSARG00000000162	EXOSC1	98	53.927	Sorex_araneus
ENSNBRG00000024007	exosc1	97	57.068	ENSSPUG00000012263	EXOSC1	98	57.068	Sphenodon_punctatus
ENSNBRG00000024007	exosc1	100	76.404	ENSSPAG00000016792	exosc1	84	76.404	Stegastes_partitus
ENSNBRG00000024007	exosc1	97	60.209	ENSSSCG00000010518	EXOSC1	89	60.209	Sus_scrofa
ENSNBRG00000024007	exosc1	97	58.639	ENSTGUG00000009692	EXOSC1	98	58.639	Taeniopygia_guttata
ENSNBRG00000024007	exosc1	97	64.737	ENSTRUG00000007706	exosc1	98	64.737	Takifugu_rubripes
ENSNBRG00000024007	exosc1	100	64.141	ENSTNIG00000014079	exosc1	99	64.141	Tetraodon_nigroviridis
ENSNBRG00000024007	exosc1	97	55.263	ENSTBEG00000006011	EXOSC1	98	55.263	Tupaia_belangeri
ENSNBRG00000024007	exosc1	92	61.749	ENSTTRG00000009887	EXOSC1	99	61.749	Tursiops_truncatus
ENSNBRG00000024007	exosc1	98	67.045	ENSUAMG00000010266	EXOSC1	98	67.045	Ursus_americanus
ENSNBRG00000024007	exosc1	98	67.045	ENSUMAG00000022002	EXOSC1	98	67.045	Ursus_maritimus
ENSNBRG00000024007	exosc1	97	60.733	ENSVVUG00000023192	EXOSC1	62	60.733	Vulpes_vulpes
ENSNBRG00000024007	exosc1	99	59.585	ENSXETG00000003434	exosc1	99	59.585	Xenopus_tropicalis
ENSNBRG00000024007	exosc1	53	90.123	ENSXCOG00000014499	exosc1	62	90.123	Xiphophorus_couchianus
ENSNBRG00000024007	exosc1	100	69.006	ENSXMAG00000023382	exosc1	95	69.006	Xiphophorus_maculatus