EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000024312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5280 bases
Position: chrJH422525.1:44595-49874
Accession: 102776562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000032026	zf-C2H2	PF00096.26	2.2e-12	1	2
ENSNBRP00000032026	zf-C2H2	PF00096.26	2.2e-12	2	2
ENSNBRP00000032026	zf-met	PF12874.7	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032834	-	1032	XM_006808877	ENSNBRP00000032026	343 (aa)	XP_006808940	-

Gene Model

Click here to download ENSNBRG00000024312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000024312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000024312	-	100	73.890	ENSNBRG00000006727	prdm12b	100	73.368
ENSNBRG00000024312	-	69	38.554	ENSNBRG00000004976	prdm5	94	38.554
ENSNBRG00000024312	-	64	39.754	ENSNBRG00000023669	prdm14	52	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000024312	-	95	76.316	ENSG00000130711	PRDM12	99	71.353	Homo_sapiens
ENSNBRG00000024312	-	100	67.473	ENSAPOG00000018234	-	100	66.935	Acanthochromis_polyacanthus
ENSNBRG00000024312	-	100	70.918	ENSAPOG00000016051	prdm12b	100	71.429	Acanthochromis_polyacanthus
ENSNBRG00000024312	-	93	76.347	ENSAMEG00000016234	PRDM12	99	75.749	Ailuropoda_melanoleuca
ENSNBRG00000024312	-	100	74.413	ENSACIG00000019578	prdm12b	100	73.890	Amphilophus_citrinellus
ENSNBRG00000024312	-	100	83.641	ENSACIG00000005193	-	100	84.169	Amphilophus_citrinellus
ENSNBRG00000024312	-	100	73.247	ENSAOCG00000015040	prdm12b	100	72.987	Amphiprion_ocellaris
ENSNBRG00000024312	-	100	78.010	ENSAPEG00000022849	-	99	78.010	Amphiprion_percula
ENSNBRG00000024312	-	100	73.822	ENSAPEG00000015092	prdm12b	100	73.560	Amphiprion_percula
ENSNBRG00000024312	-	100	78.481	ENSATEG00000014595	-	96	84.320	Anabas_testudineus
ENSNBRG00000024312	-	95	76.316	ENSANAG00000020616	PRDM12	97	76.023	Aotus_nancymaae
ENSNBRG00000024312	-	100	86.260	ENSACLG00000007631	-	100	86.260	Astatotilapia_calliptera
ENSNBRG00000024312	-	100	74.663	ENSACLG00000011876	prdm12b	100	74.124	Astatotilapia_calliptera
ENSNBRG00000024312	-	100	73.684	ENSAMXG00000033665	prdm12b	100	73.947	Astyanax_mexicanus
ENSNBRG00000024312	-	100	74.124	ENSAMXG00000008540	PRDM12	100	73.315	Astyanax_mexicanus
ENSNBRG00000024312	-	95	76.608	ENSBTAG00000023797	PRDM12	99	73.046	Bos_taurus
ENSNBRG00000024312	-	95	76.316	ENSCJAG00000020540	PRDM12	99	72.703	Callithrix_jacchus
ENSNBRG00000024312	-	78	79.505	ENSCAFG00000023076	PRDM12	98	74.286	Canis_familiaris
ENSNBRG00000024312	-	95	76.608	ENSCAFG00020024046	PRDM12	99	72.460	Canis_lupus_dingo
ENSNBRG00000024312	-	95	76.608	ENSCHIG00000025005	PRDM12	99	72.849	Capra_hircus
ENSNBRG00000024312	-	90	76.780	ENSCPOG00000005901	PRDM12	95	76.471	Cavia_porcellus
ENSNBRG00000024312	-	95	76.316	ENSCCAG00000037485	PRDM12	99	72.118	Cebus_capucinus
ENSNBRG00000024312	-	95	76.316	ENSCATG00000020327	PRDM12	99	72.118	Cercocebus_atys
ENSNBRG00000024312	-	96	75.942	ENSCLAG00000005499	PRDM12	91	75.652	Chinchilla_lanigera
ENSNBRG00000024312	-	95	76.316	ENSCSAG00000014756	PRDM12	99	71.925	Chlorocebus_sabaeus
ENSNBRG00000024312	-	100	75.824	ENSCPBG00000022628	PRDM12	99	75.549	Chrysemys_picta_bellii
ENSNBRG00000024312	-	95	76.608	ENSCGRG00001015005	Prdm12	99	72.074	Cricetulus_griseus_chok1gshd
ENSNBRG00000024312	-	100	72.703	ENSCVAG00000017166	prdm12b	100	72.703	Cyprinodon_variegatus
ENSNBRG00000024312	-	100	76.650	ENSCVAG00000000944	-	100	75.635	Cyprinodon_variegatus
ENSNBRG00000024312	-	100	76.064	ENSDARG00000007430	prdm12b	100	75.532	Danio_rerio
ENSNBRG00000024312	-	95	76.093	ENSDNOG00000042302	PRDM12	99	72.581	Dasypus_novemcinctus
ENSNBRG00000024312	-	89	62.130	ENSEBUG00000016780	prdm12b	75	60.745	Eptatretus_burgeri
ENSNBRG00000024312	-	97	75.645	ENSEASG00005008472	PRDM12	99	72.849	Equus_asinus_asinus
ENSNBRG00000024312	-	97	75.645	ENSECAG00000005933	PRDM12	99	72.849	Equus_caballus
ENSNBRG00000024312	-	100	74.211	ENSELUG00000009905	prdm12b	100	73.421	Esox_lucius
ENSNBRG00000024312	-	100	72.776	ENSELUG00000013674	PRDM12	99	72.507	Esox_lucius
ENSNBRG00000024312	-	95	76.608	ENSFCAG00000043086	PRDM12	99	72.654	Felis_catus
ENSNBRG00000024312	-	100	77.198	ENSFALG00000001445	PRDM12	89	76.923	Ficedula_albicollis
ENSNBRG00000024312	-	100	72.178	ENSFHEG00000003944	prdm12b	100	72.063	Fundulus_heteroclitus
ENSNBRG00000024312	-	100	80.362	ENSFHEG00000007746	-	100	79.845	Fundulus_heteroclitus
ENSNBRG00000024312	-	93	80.000	ENSGMOG00000011797	prdm12b	99	75.549	Gadus_morhua
ENSNBRG00000024312	-	100	77.198	ENSGALG00000003895	PRDM12	99	76.923	Gallus_gallus
ENSNBRG00000024312	-	100	73.177	ENSGAFG00000010827	prdm12b	99	73.177	Gambusia_affinis
ENSNBRG00000024312	-	100	72.966	ENSGACG00000016713	prdm12b	99	72.703	Gasterosteus_aculeatus
ENSNBRG00000024312	-	100	76.099	ENSGAGG00000014083	PRDM12	99	75.549	Gopherus_agassizii
ENSNBRG00000024312	-	95	76.023	ENSGGOG00000010568	PRDM12	99	71.277	Gorilla_gorilla
ENSNBRG00000024312	-	100	86.260	ENSHBUG00000022537	-	93	86.260	Haplochromis_burtoni
ENSNBRG00000024312	-	100	74.211	ENSHBUG00000022878	prdm12b	100	73.684	Haplochromis_burtoni
ENSNBRG00000024312	-	95	76.765	ENSHGLG00000013939	PRDM12	99	72.000	Heterocephalus_glaber_female
ENSNBRG00000024312	-	93	72.727	ENSHCOG00000003663	prdm12b	100	66.418	Hippocampus_comes
ENSNBRG00000024312	-	100	74.387	ENSHCOG00000021167	-	100	72.480	Hippocampus_comes
ENSNBRG00000024312	-	100	72.727	ENSIPUG00000019544	PRDM12	100	72.727	Ictalurus_punctatus
ENSNBRG00000024312	-	100	74.868	ENSIPUG00000017053	prdm12b	100	74.339	Ictalurus_punctatus
ENSNBRG00000024312	-	95	76.608	ENSSTOG00000005986	PRDM12	87	76.608	Ictidomys_tridecemlineatus
ENSNBRG00000024312	-	95	76.765	ENSJJAG00000005424	Prdm12	99	76.471	Jaculus_jaculus
ENSNBRG00000024312	-	100	66.184	ENSKMAG00000016921	prdm12b	100	66.184	Kryptolebias_marmoratus
ENSNBRG00000024312	-	94	87.021	ENSKMAG00000021205	-	95	84.928	Kryptolebias_marmoratus
ENSNBRG00000024312	-	100	79.950	ENSLBEG00000007776	-	100	79.699	Labrus_bergylta
ENSNBRG00000024312	-	100	72.680	ENSLBEG00000017769	prdm12b	100	72.423	Labrus_bergylta
ENSNBRG00000024312	-	100	75.824	ENSLACG00000017560	PRDM12	99	75.824	Latimeria_chalumnae
ENSNBRG00000024312	-	100	76.408	ENSLOCG00000005429	prdm12b	99	75.603	Lepisosteus_oculatus
ENSNBRG00000024312	-	95	74.928	ENSLAFG00000006979	PRDM12	90	74.928	Loxodonta_africana
ENSNBRG00000024312	-	95	76.316	ENSMFAG00000040322	PRDM12	99	71.618	Macaca_fascicularis
ENSNBRG00000024312	-	95	76.316	ENSMNEG00000037234	PRDM12	99	72.118	Macaca_nemestrina
ENSNBRG00000024312	-	100	79.177	ENSMAMG00000018988	-	100	80.720	Mastacembelus_armatus
ENSNBRG00000024312	-	100	72.208	ENSMAMG00000013212	prdm12b	100	72.468	Mastacembelus_armatus
ENSNBRG00000024312	-	100	85.823	ENSMZEG00005000415	PRDM12	100	85.823	Maylandia_zebra
ENSNBRG00000024312	-	98	76.816	ENSMGAG00000005438	PRDM12	98	76.536	Meleagris_gallopavo
ENSNBRG00000024312	-	100	72.533	ENSMAUG00000013040	Prdm12	99	72.533	Mesocricetus_auratus
ENSNBRG00000024312	-	95	76.608	ENSMICG00000015480	PRDM12	99	72.581	Microcebus_murinus
ENSNBRG00000024312	-	99	74.790	ENSMOCG00000021026	Prdm12	90	76.901	Microtus_ochrogaster
ENSNBRG00000024312	-	100	76.164	ENSMODG00000012108	PRDM12	99	75.068	Monodelphis_domestica
ENSNBRG00000024312	-	82	70.219	ENSMALG00000021901	prdm12b	96	71.885	Monopterus_albus
ENSNBRG00000024312	-	95	76.608	MGP_CAROLIEiJ_G0023414	Prdm12	99	72.267	Mus_caroli
ENSNBRG00000024312	-	95	76.608	ENSMUSG00000079466	Prdm12	99	72.267	Mus_musculus
ENSNBRG00000024312	-	95	76.608	MGP_PahariEiJ_G0024871	Prdm12	99	72.267	Mus_pahari
ENSNBRG00000024312	-	95	76.608	MGP_SPRETEiJ_G0024331	Prdm12	99	72.267	Mus_spretus
ENSNBRG00000024312	-	93	77.910	ENSNGAG00000018480	Prdm12	99	74.586	Nannospalax_galili
ENSNBRG00000024312	-	100	67.945	ENSMEUG00000003828	PRDM12	86	87.826	Notamacropus_eugenii
ENSNBRG00000024312	-	95	76.471	ENSOPRG00000008680	PRDM12	99	76.471	Ochotona_princeps
ENSNBRG00000024312	-	97	75.714	ENSODEG00000016282	PRDM12	64	75.429	Octodon_degus
ENSNBRG00000024312	-	62	83.028	ENSOANG00000001043	PRDM12	100	83.028	Ornithorhynchus_anatinus
ENSNBRG00000024312	-	86	76.452	ENSOCUG00000008241	PRDM12	96	76.774	Oryctolagus_cuniculus
ENSNBRG00000024312	-	100	80.000	ENSORLG00000017558	-	100	80.000	Oryzias_latipes
ENSNBRG00000024312	-	100	71.318	ENSORLG00000007114	prdm12b	99	71.059	Oryzias_latipes
ENSNBRG00000024312	-	100	80.051	ENSORLG00020013167	-	100	79.545	Oryzias_latipes_hni
ENSNBRG00000024312	-	100	71.208	ENSORLG00020019565	prdm12b	99	70.951	Oryzias_latipes_hni
ENSNBRG00000024312	-	100	79.747	ENSORLG00015003435	-	100	79.747	Oryzias_latipes_hsok
ENSNBRG00000024312	-	100	71.503	ENSORLG00015007621	prdm12b	99	70.984	Oryzias_latipes_hsok
ENSNBRG00000024312	-	100	83.733	ENSOMEG00000007762	-	100	82.400	Oryzias_melastigma
ENSNBRG00000024312	-	100	69.744	ENSOMEG00000004134	prdm12b	99	69.744	Oryzias_melastigma
ENSNBRG00000024312	-	95	76.608	ENSOGAG00000007557	PRDM12	99	76.608	Otolemur_garnettii
ENSNBRG00000024312	-	84	72.937	ENSPPAG00000031506	-	99	72.607	Pan_paniscus
ENSNBRG00000024312	-	100	67.751	ENSPPRG00000023024	PRDM12	92	67.751	Panthera_pardus
ENSNBRG00000024312	-	95	76.316	ENSPTRG00000043324	-	99	71.543	Pan_troglodytes
ENSNBRG00000024312	-	95	76.316	ENSPTRG00000021475	PRDM12	99	71.543	Pan_troglodytes
ENSNBRG00000024312	-	95	76.316	ENSPANG00000025967	PRDM12	99	72.118	Papio_anubis
ENSNBRG00000024312	-	100	75.654	ENSPKIG00000007228	prdm12b	100	75.131	Paramormyrops_kingsleyae
ENSNBRG00000024312	-	96	72.934	ENSPKIG00000004305	PRDM12	98	72.080	Paramormyrops_kingsleyae
ENSNBRG00000024312	-	100	76.099	ENSPSIG00000006739	PRDM12	99	75.549	Pelodiscus_sinensis
ENSNBRG00000024312	-	100	76.276	ENSPMGG00000002356	-	100	74.745	Periophthalmus_magnuspinnatus
ENSNBRG00000024312	-	100	73.670	ENSPMGG00000008867	prdm12b	99	73.936	Periophthalmus_magnuspinnatus
ENSNBRG00000024312	-	95	76.765	ENSPEMG00000009969	Prdm12	91	76.608	Peromyscus_maniculatus_bairdii
ENSNBRG00000024312	-	100	76.438	ENSPCIG00000024119	PRDM12	99	75.342	Phascolarctos_cinereus
ENSNBRG00000024312	-	100	73.615	ENSPFOG00000019841	prdm12b	100	73.615	Poecilia_formosa
ENSNBRG00000024312	-	100	72.351	ENSPLAG00000016626	prdm12b	99	72.351	Poecilia_latipinna
ENSNBRG00000024312	-	96	72.460	ENSPMEG00000016698	prdm12b	99	72.460	Poecilia_mexicana
ENSNBRG00000024312	-	99	79.718	ENSPREG00000003211	-	97	79.718	Poecilia_reticulata
ENSNBRG00000024312	-	100	71.907	ENSPREG00000015073	prdm12b	99	71.907	Poecilia_reticulata
ENSNBRG00000024312	-	96	76.093	ENSPPYG00000019694	PRDM12	95	75.802	Pongo_abelii
ENSNBRG00000024312	-	95	76.608	ENSPCOG00000022255	PRDM12	99	72.340	Propithecus_coquereli
ENSNBRG00000024312	-	95	76.608	ENSPVAG00000001511	PRDM12	99	72.074	Pteropus_vampyrus
ENSNBRG00000024312	-	100	74.084	ENSPNYG00000009607	prdm12b	100	73.560	Pundamilia_nyererei
ENSNBRG00000024312	-	100	85.823	ENSPNYG00000013589	-	100	85.823	Pundamilia_nyererei
ENSNBRG00000024312	-	100	75.661	ENSPNAG00000024532	prdm12b	100	75.397	Pygocentrus_nattereri
ENSNBRG00000024312	-	100	72.414	ENSPNAG00000013396	PRDM12	100	72.944	Pygocentrus_nattereri
ENSNBRG00000024312	-	95	76.608	ENSRNOG00000009218	Prdm12	99	72.267	Rattus_norvegicus
ENSNBRG00000024312	-	91	76.758	ENSRBIG00000042712	PRDM12	88	75.831	Rhinopithecus_bieti
ENSNBRG00000024312	-	92	77.039	ENSRROG00000043554	PRDM12	99	76.737	Rhinopithecus_roxellana
ENSNBRG00000024312	-	100	75.956	ENSSHAG00000015972	PRDM12	99	74.863	Sarcophilus_harrisii
ENSNBRG00000024312	-	100	69.521	ENSSMAG00000003754	prdm12b	100	70.101	Scophthalmus_maximus
ENSNBRG00000024312	-	100	78.372	ENSSDUG00000019071	-	100	78.117	Seriola_dumerili
ENSNBRG00000024312	-	100	72.494	ENSSDUG00000023498	prdm12b	100	72.051	Seriola_dumerili
ENSNBRG00000024312	-	100	71.208	ENSSLDG00000009557	prdm12b	100	71.538	Seriola_lalandi_dorsalis
ENSNBRG00000024312	-	100	84.444	ENSSLDG00000013562	-	100	84.444	Seriola_lalandi_dorsalis
ENSNBRG00000024312	-	100	77.473	ENSSPUG00000013424	PRDM12	99	76.099	Sphenodon_punctatus
ENSNBRG00000024312	-	100	72.798	ENSSPAG00000018824	prdm12b	100	72.021	Stegastes_partitus
ENSNBRG00000024312	-	100	70.361	ENSSPAG00000022420	-	100	70.496	Stegastes_partitus
ENSNBRG00000024312	-	95	76.608	ENSSSCG00000005703	PRDM12	99	72.460	Sus_scrofa
ENSNBRG00000024312	-	100	74.734	ENSTRUG00000018659	prdm12b	100	74.202	Takifugu_rubripes
ENSNBRG00000024312	-	100	80.055	ENSTRUG00000013239	-	100	79.178	Takifugu_rubripes
ENSNBRG00000024312	-	100	78.729	ENSTNIG00000005859	-	99	78.453	Tetraodon_nigroviridis
ENSNBRG00000024312	-	100	73.936	ENSTNIG00000009020	prdm12b	99	73.404	Tetraodon_nigroviridis
ENSNBRG00000024312	-	95	76.608	ENSUAMG00000009653	PRDM12	96	74.302	Ursus_americanus
ENSNBRG00000024312	-	95	76.608	ENSVVUG00000027662	PRDM12	79	76.608	Vulpes_vulpes
ENSNBRG00000024312	-	100	73.298	ENSXCOG00000002836	prdm12b	99	73.298	Xiphophorus_couchianus
ENSNBRG00000024312	-	100	71.688	ENSXMAG00000005537	prdm12b	100	71.688	Xiphophorus_maculatus
ENSNBRG00000024312	-	100	79.112	ENSXMAG00000028012	-	100	78.851	Xiphophorus_maculatus