EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000024343 (Gene tree)
Gene ID: 102788411
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: protein SMG7-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 18718 bases
Position: chrJH422527.1:15053-33770
Accession: 102788411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000032063	EST1	PF10374.9	6e-09	1	1
ENSNBRP00000032063	EST1_DNA_bind	PF10373.9	1.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000032874	-	3240	XM_006808912	ENSNBRP00000032063	1079 (aa)	XP_006808975	-

Gene Model

Click here to download ENSNBRG00000024343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000024343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000024343	smg7	98	70.476	ENSG00000116698	SMG7	98	61.304	Homo_sapiens
ENSNBRG00000024343	smg7	88	88.379	ENSAPOG00000009611	smg7	93	88.379	Acanthochromis_polyacanthus
ENSNBRG00000024343	smg7	96	69.524	ENSAMEG00000002357	SMG7	98	61.646	Ailuropoda_melanoleuca
ENSNBRG00000024343	smg7	98	82.668	ENSACIG00000015152	smg7	100	84.029	Amphilophus_citrinellus
ENSNBRG00000024343	smg7	99	84.234	ENSAOCG00000013538	smg7	98	85.437	Amphiprion_ocellaris
ENSNBRG00000024343	smg7	99	83.717	ENSAPEG00000007851	smg7	98	84.921	Amphiprion_percula
ENSNBRG00000024343	smg7	99	83.333	ENSATEG00000006931	smg7	98	83.156	Anabas_testudineus
ENSNBRG00000024343	smg7	99	60.839	ENSAPLG00000015811	SMG7	98	60.817	Anas_platyrhynchos
ENSNBRG00000024343	smg7	98	72.038	ENSACAG00000014989	SMG7	98	58.612	Anolis_carolinensis
ENSNBRG00000024343	smg7	96	70.476	ENSANAG00000028114	SMG7	98	61.010	Aotus_nancymaae
ENSNBRG00000024343	smg7	99	90.739	ENSACLG00000022079	smg7	98	90.917	Astatotilapia_calliptera
ENSNBRG00000024343	smg7	99	70.410	ENSAMXG00000020809	smg7	98	70.416	Astyanax_mexicanus
ENSNBRG00000024343	smg7	98	71.905	ENSBTAG00000008003	SMG7	98	61.478	Bos_taurus
ENSNBRG00000024343	smg7	96	70.476	ENSCJAG00000005135	SMG7	98	60.923	Callithrix_jacchus
ENSNBRG00000024343	smg7	98	70.000	ENSCAFG00000013276	SMG7	96	57.877	Canis_familiaris
ENSNBRG00000024343	smg7	98	70.000	ENSCAFG00020015475	SMG7	98	61.471	Canis_lupus_dingo
ENSNBRG00000024343	smg7	98	71.564	ENSCHIG00000018192	SMG7	98	58.159	Capra_hircus
ENSNBRG00000024343	smg7	98	70.000	ENSTSYG00000002667	SMG7	98	61.391	Carlito_syrichta
ENSNBRG00000024343	smg7	99	70.476	ENSCPOG00000008906	SMG7	99	57.776	Cavia_porcellus
ENSNBRG00000024343	smg7	94	70.952	ENSCCAG00000028596	SMG7	98	61.184	Cebus_capucinus
ENSNBRG00000024343	smg7	98	70.476	ENSCATG00000011063	SMG7	98	61.391	Cercocebus_atys
ENSNBRG00000024343	smg7	98	70.000	ENSCLAG00000010751	SMG7	98	61.130	Chinchilla_lanigera
ENSNBRG00000024343	smg7	98	70.952	ENSCSAG00000012654	SMG7	96	57.908	Chlorocebus_sabaeus
ENSNBRG00000024343	smg7	90	64.205	ENSCHOG00000010522	SMG7	84	64.571	Choloepus_hoffmanni
ENSNBRG00000024343	smg7	97	70.142	ENSCPBG00000015724	SMG7	98	60.997	Chrysemys_picta_bellii
ENSNBRG00000024343	smg7	96	70.476	ENSCANG00000015680	SMG7	98	61.391	Colobus_angolensis_palliatus
ENSNBRG00000024343	smg7	98	70.297	ENSCGRG00001013705	Smg7	98	60.556	Cricetulus_griseus_chok1gshd
ENSNBRG00000024343	smg7	98	70.297	ENSCGRG00000018401	Smg7	99	60.556	Cricetulus_griseus_crigri
ENSNBRG00000024343	smg7	99	75.571	ENSCVAG00000011842	smg7	99	75.919	Cyprinodon_variegatus
ENSNBRG00000024343	smg7	99	69.858	ENSDARG00000060767	smg7	98	69.965	Danio_rerio
ENSNBRG00000024343	smg7	98	69.524	ENSDORG00000007331	Smg7	98	57.322	Dipodomys_ordii
ENSNBRG00000024343	smg7	95	65.318	ENSETEG00000002654	SMG7	98	56.304	Echinops_telfairi
ENSNBRG00000024343	smg7	98	70.000	ENSEASG00005006524	SMG7	98	58.075	Equus_asinus_asinus
ENSNBRG00000024343	smg7	98	70.476	ENSECAG00000004313	SMG7	95	77.044	Equus_caballus
ENSNBRG00000024343	smg7	95	66.286	ENSEEUG00000002024	SMG7	92	58.217	Erinaceus_europaeus
ENSNBRG00000024343	smg7	99	68.844	ENSELUG00000010293	smg7	97	70.991	Esox_lucius
ENSNBRG00000024343	smg7	98	70.952	ENSFCAG00000010900	SMG7	98	60.459	Felis_catus
ENSNBRG00000024343	smg7	97	69.849	ENSFALG00000003047	SMG7	99	57.890	Ficedula_albicollis
ENSNBRG00000024343	smg7	98	70.000	ENSFDAG00000012121	SMG7	99	57.573	Fukomys_damarensis
ENSNBRG00000024343	smg7	99	75.841	ENSFHEG00000011073	smg7	98	76.035	Fundulus_heteroclitus
ENSNBRG00000024343	smg7	87	72.656	ENSGMOG00000004916	smg7	81	73.000	Gadus_morhua
ENSNBRG00000024343	smg7	99	60.839	ENSGALG00000004667	SMG7	98	60.467	Gallus_gallus
ENSNBRG00000024343	smg7	99	75.618	ENSGAFG00000019000	smg7	98	75.351	Gambusia_affinis
ENSNBRG00000024343	smg7	95	83.799	ENSGACG00000001634	smg7	98	75.636	Gasterosteus_aculeatus
ENSNBRG00000024343	smg7	98	70.952	ENSGGOG00000002342	SMG7	98	61.478	Gorilla_gorilla
ENSNBRG00000024343	smg7	99	90.390	ENSHBUG00000003726	smg7	98	90.390	Haplochromis_burtoni
ENSNBRG00000024343	smg7	98	70.000	ENSHGLG00000009353	SMG7	98	61.304	Heterocephalus_glaber_female
ENSNBRG00000024343	smg7	98	60.476	ENSHGLG00100004878	-	98	52.525	Heterocephalus_glaber_male
ENSNBRG00000024343	smg7	98	70.000	ENSHGLG00100009637	-	98	61.217	Heterocephalus_glaber_male
ENSNBRG00000024343	smg7	99	69.875	ENSIPUG00000016997	smg7	98	70.133	Ictalurus_punctatus
ENSNBRG00000024343	smg7	98	70.142	ENSSTOG00000000401	SMG7	98	60.000	Ictidomys_tridecemlineatus
ENSNBRG00000024343	smg7	98	69.668	ENSJJAG00000012351	Smg7	98	56.965	Jaculus_jaculus
ENSNBRG00000024343	smg7	98	76.122	ENSKMAG00000004900	smg7	100	76.655	Kryptolebias_marmoratus
ENSNBRG00000024343	smg7	99	82.395	ENSLBEG00000002983	smg7	98	82.216	Labrus_bergylta
ENSNBRG00000024343	smg7	52	78.393	ENSLBEG00000005220	-	70	78.393	Labrus_bergylta
ENSNBRG00000024343	smg7	97	72.864	ENSLACG00000000972	SMG7	92	70.476	Latimeria_chalumnae
ENSNBRG00000024343	smg7	99	59.354	ENSLOCG00000002010	smg7	98	60.198	Lepisosteus_oculatus
ENSNBRG00000024343	smg7	98	69.194	ENSLAFG00000008186	SMG7	98	57.322	Loxodonta_africana
ENSNBRG00000024343	smg7	98	70.476	ENSMFAG00000031653	SMG7	100	58.355	Macaca_fascicularis
ENSNBRG00000024343	smg7	98	70.476	ENSMMUG00000018458	SMG7	98	61.391	Macaca_mulatta
ENSNBRG00000024343	smg7	96	70.476	ENSMNEG00000034798	SMG7	98	61.391	Macaca_nemestrina
ENSNBRG00000024343	smg7	98	70.476	ENSMLEG00000037170	SMG7	98	61.391	Mandrillus_leucophaeus
ENSNBRG00000024343	smg7	87	79.213	ENSMAMG00000018733	smg7	83	79.919	Mastacembelus_armatus
ENSNBRG00000024343	smg7	99	90.739	ENSMZEG00005015247	smg7	98	90.739	Maylandia_zebra
ENSNBRG00000024343	smg7	99	60.245	ENSMGAG00000001561	SMG7	98	60.225	Meleagris_gallopavo
ENSNBRG00000024343	smg7	98	70.476	ENSMAUG00000019484	Smg7	98	60.382	Mesocricetus_auratus
ENSNBRG00000024343	smg7	98	69.668	ENSMICG00000007145	SMG7	98	61.358	Microcebus_murinus
ENSNBRG00000024343	smg7	98	69.524	ENSMOCG00000020748	Smg7	98	60.261	Microtus_ochrogaster
ENSNBRG00000024343	smg7	99	78.507	ENSMMOG00000001524	smg7	98	79.515	Mola_mola
ENSNBRG00000024343	smg7	91	61.254	ENSMODG00000007139	SMG7	97	60.434	Monodelphis_domestica
ENSNBRG00000024343	smg7	99	80.796	ENSMALG00000000061	smg7	92	80.776	Monopterus_albus
ENSNBRG00000024343	smg7	98	70.000	MGP_CAROLIEiJ_G0014704	Smg7	98	60.889	Mus_caroli
ENSNBRG00000024343	smg7	98	70.000	ENSMUSG00000042772	Smg7	98	60.643	Mus_musculus
ENSNBRG00000024343	smg7	98	70.000	MGP_PahariEiJ_G0027940	Smg7	98	60.870	Mus_pahari
ENSNBRG00000024343	smg7	98	70.000	MGP_SPRETEiJ_G0015511	Smg7	98	60.730	Mus_spretus
ENSNBRG00000024343	smg7	98	69.194	ENSMPUG00000011732	SMG7	97	58.045	Mustela_putorius_furo
ENSNBRG00000024343	smg7	98	69.048	ENSMLUG00000015417	SMG7	98	57.573	Myotis_lucifugus
ENSNBRG00000024343	smg7	99	68.720	ENSNGAG00000009836	Smg7	98	61.067	Nannospalax_galili
ENSNBRG00000024343	smg7	98	70.476	ENSNLEG00000018018	SMG7	98	61.478	Nomascus_leucogenys
ENSNBRG00000024343	smg7	56	100.000	ENSMEUG00000004681	SMG7	64	100.000	Notamacropus_eugenii
ENSNBRG00000024343	smg7	96	54.137	ENSOPRG00000013942	SMG7	95	53.940	Ochotona_princeps
ENSNBRG00000024343	smg7	98	69.668	ENSODEG00000010390	SMG7	98	60.957	Octodon_degus
ENSNBRG00000024343	smg7	99	90.151	ENSONIG00000000277	smg7	98	90.328	Oreochromis_niloticus
ENSNBRG00000024343	smg7	98	70.616	ENSOANG00000000994	SMG7	99	58.086	Ornithorhynchus_anatinus
ENSNBRG00000024343	smg7	99	55.462	ENSOCUG00000005887	SMG7	91	56.145	Oryctolagus_cuniculus
ENSNBRG00000024343	smg7	99	73.286	ENSORLG00000007314	smg7	98	73.979	Oryzias_latipes
ENSNBRG00000024343	smg7	99	73.731	ENSORLG00020015779	smg7	98	74.423	Oryzias_latipes_hni
ENSNBRG00000024343	smg7	99	73.998	ENSORLG00015012289	smg7	98	74.245	Oryzias_latipes_hsok
ENSNBRG00000024343	smg7	99	66.864	ENSOMEG00000002328	smg7	98	70.077	Oryzias_melastigma
ENSNBRG00000024343	smg7	95	64.368	ENSOGAG00000003107	SMG7	92	56.745	Otolemur_garnettii
ENSNBRG00000024343	smg7	98	71.429	ENSOARG00000001352	SMG7	99	60.437	Ovis_aries
ENSNBRG00000024343	smg7	96	70.476	ENSPPAG00000031619	SMG7	98	61.478	Pan_paniscus
ENSNBRG00000024343	smg7	98	70.952	ENSPPRG00000011222	SMG7	98	61.996	Panthera_pardus
ENSNBRG00000024343	smg7	96	70.952	ENSPTIG00000007242	SMG7	100	58.924	Panthera_tigris_altaica
ENSNBRG00000024343	smg7	96	70.476	ENSPTRG00000001764	SMG7	98	61.478	Pan_troglodytes
ENSNBRG00000024343	smg7	98	70.476	ENSPANG00000004520	SMG7	98	61.391	Papio_anubis
ENSNBRG00000024343	smg7	99	64.742	ENSPKIG00000007242	smg7	98	65.009	Paramormyrops_kingsleyae
ENSNBRG00000024343	smg7	98	70.142	ENSPSIG00000012201	SMG7	99	61.077	Pelodiscus_sinensis
ENSNBRG00000024343	smg7	74	49.396	ENSPMGG00000021833	smg7	97	49.517	Periophthalmus_magnuspinnatus
ENSNBRG00000024343	smg7	98	70.000	ENSPEMG00000011315	Smg7	99	60.175	Peromyscus_maniculatus_bairdii
ENSNBRG00000024343	smg7	98	70.952	ENSPCIG00000003786	SMG7	98	61.097	Phascolarctos_cinereus
ENSNBRG00000024343	smg7	99	68.866	ENSPFOG00000019219	smg7	98	72.950	Poecilia_formosa
ENSNBRG00000024343	smg7	99	75.750	ENSPLAG00000001446	smg7	98	76.190	Poecilia_latipinna
ENSNBRG00000024343	smg7	96	75.023	ENSPMEG00000005218	smg7	98	75.479	Poecilia_mexicana
ENSNBRG00000024343	smg7	86	71.690	ENSPREG00000019039	smg7	90	71.923	Poecilia_reticulata
ENSNBRG00000024343	smg7	99	62.150	ENSPPYG00000000427	SMG7	98	61.478	Pongo_abelii
ENSNBRG00000024343	smg7	82	67.763	ENSPCAG00000008360	SMG7	86	67.763	Procavia_capensis
ENSNBRG00000024343	smg7	98	70.952	ENSPCOG00000011996	SMG7	98	60.315	Propithecus_coquereli
ENSNBRG00000024343	smg7	89	71.053	ENSPVAG00000000851	SMG7	88	53.321	Pteropus_vampyrus
ENSNBRG00000024343	smg7	99	90.990	ENSPNYG00000007643	smg7	98	90.990	Pundamilia_nyererei
ENSNBRG00000024343	smg7	99	69.876	ENSPNAG00000011374	smg7	98	69.983	Pygocentrus_nattereri
ENSNBRG00000024343	smg7	98	70.142	ENSRNOG00000027962	Smg7	98	60.990	Rattus_norvegicus
ENSNBRG00000024343	smg7	98	70.476	ENSRBIG00000036316	SMG7	98	61.391	Rhinopithecus_bieti
ENSNBRG00000024343	smg7	98	70.476	ENSRROG00000035719	SMG7	98	61.391	Rhinopithecus_roxellana
ENSNBRG00000024343	smg7	96	70.000	ENSSBOG00000023454	SMG7	98	59.703	Saimiri_boliviensis_boliviensis
ENSNBRG00000024343	smg7	99	61.855	ENSSHAG00000013147	SMG7	98	61.043	Sarcophilus_harrisii
ENSNBRG00000024343	smg7	99	67.943	ENSSFOG00015017252	smg7	99	67.580	Scleropages_formosus
ENSNBRG00000024343	smg7	99	78.667	ENSSMAG00000006067	smg7	100	78.824	Scophthalmus_maximus
ENSNBRG00000024343	smg7	63	89.929	ENSSDUG00000017543	smg7	98	83.789	Seriola_dumerili
ENSNBRG00000024343	smg7	99	61.706	ENSSPUG00000002064	SMG7	98	61.164	Sphenodon_punctatus
ENSNBRG00000024343	smg7	99	83.214	ENSSPAG00000008733	smg7	98	83.348	Stegastes_partitus
ENSNBRG00000024343	smg7	98	70.952	ENSSSCG00000015558	SMG7	98	60.349	Sus_scrofa
ENSNBRG00000024343	smg7	99	60.646	ENSTGUG00000003928	SMG7	99	61.257	Taeniopygia_guttata
ENSNBRG00000024343	smg7	97	77.778	ENSTNIG00000002802	smg7	91	78.283	Tetraodon_nigroviridis
ENSNBRG00000024343	smg7	77	67.073	ENSTBEG00000003220	SMG7	68	67.073	Tupaia_belangeri
ENSNBRG00000024343	smg7	95	65.896	ENSTTRG00000014778	SMG7	92	56.995	Tursiops_truncatus
ENSNBRG00000024343	smg7	98	60.161	ENSUAMG00000017473	SMG7	100	59.946	Ursus_americanus
ENSNBRG00000024343	smg7	96	69.668	ENSUMAG00000016389	SMG7	100	59.946	Ursus_maritimus
ENSNBRG00000024343	smg7	98	70.000	ENSVVUG00000008976	SMG7	98	60.246	Vulpes_vulpes
ENSNBRG00000024343	smg7	99	56.733	ENSXETG00000012528	smg7	98	56.981	Xenopus_tropicalis
ENSNBRG00000024343	smg7	99	75.575	ENSXMAG00000007123	smg7	98	75.728	Xiphophorus_maculatus