EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000000088 (Gene tree)
Gene ID: -
Gene Symbol: Gm3854
Alias: -
Full Name: predicted gene 3854
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 5429 bases
Position: chrKL203156.1:225228-230656
Accession: 3782026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	1	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	2	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	3	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	4	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	5	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	6	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	7	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	8	9
ENSNGAP00000000103	zf-C2H2	PF00096.26	1e-52	9	9
ENSNGAP00000000103	zf-met	PF12874.7	1.6e-09	1	2
ENSNGAP00000000103	zf-met	PF12874.7	1.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000000105	-	1473	-	ENSNGAP00000000103	490 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000000088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000000088	Gm3854	66	46.237	ENSNGAG00000012888	Zfp628	57	46.237
ENSNGAG00000000088	Gm3854	54	39.706	ENSNGAG00000009442	-	54	39.706
ENSNGAG00000000088	Gm3854	62	56.849	ENSNGAG00000024130	-	98	56.849
ENSNGAG00000000088	Gm3854	61	48.113	ENSNGAG00000022234	Wt1	53	46.789
ENSNGAG00000000088	Gm3854	94	55.372	ENSNGAG00000014357	Zfp661	95	55.372
ENSNGAG00000000088	Gm3854	65	36.255	ENSNGAG00000016004	Zfp865	86	35.521
ENSNGAG00000000088	Gm3854	71	52.091	ENSNGAG00000010473	-	77	52.091
ENSNGAG00000000088	Gm3854	73	52.874	ENSNGAG00000014809	2610008E11Rik	90	52.874
ENSNGAG00000000088	Gm3854	95	51.171	ENSNGAG00000011769	Zfp354a	98	51.171
ENSNGAG00000000088	Gm3854	95	44.194	ENSNGAG00000015777	Zim1	95	44.194
ENSNGAG00000000088	Gm3854	91	43.658	ENSNGAG00000016319	Zfp1	98	43.658
ENSNGAG00000000088	Gm3854	68	36.649	ENSNGAG00000022587	Zfp319	92	36.458
ENSNGAG00000000088	Gm3854	61	36.842	ENSNGAG00000010268	Patz1	53	36.842
ENSNGAG00000000088	Gm3854	75	32.984	ENSNGAG00000002579	Zfp646	57	32.984
ENSNGAG00000000088	Gm3854	73	40.244	ENSNGAG00000020815	Scrt2	69	38.806
ENSNGAG00000000088	Gm3854	90	39.344	ENSNGAG00000022157	Zfp202	64	38.153
ENSNGAG00000000088	Gm3854	72	51.178	ENSNGAG00000016559	-	77	51.178
ENSNGAG00000000088	Gm3854	71	41.579	ENSNGAG00000001555	Zfp574	87	36.364
ENSNGAG00000000088	Gm3854	69	32.203	ENSNGAG00000018114	Zfp526	81	32.881
ENSNGAG00000000088	Gm3854	66	47.899	ENSNGAG00000002549	-	100	47.899
ENSNGAG00000000088	Gm3854	95	48.319	ENSNGAG00000016891	Zfp317	91	48.319
ENSNGAG00000000088	Gm3854	53	35.922	ENSNGAG00000007174	Ovol2	50	35.922
ENSNGAG00000000088	Gm3854	65	36.777	ENSNGAG00000018331	Zfp64	76	36.777
ENSNGAG00000000088	Gm3854	67	52.410	ENSNGAG00000019853	Zfp39	63	52.410
ENSNGAG00000000088	Gm3854	75	50.581	ENSNGAG00000020281	Zfp637	88	50.581
ENSNGAG00000000088	Gm3854	66	44.720	ENSNGAG00000003333	Gfi1b	59	43.269
ENSNGAG00000000088	Gm3854	56	38.667	ENSNGAG00000011802	Zfp784	71	38.667
ENSNGAG00000000088	Gm3854	84	51.592	ENSNGAG00000015897	Zfp560	89	51.592
ENSNGAG00000000088	Gm3854	70	40.141	ENSNGAG00000011056	Zfp236	71	40.141
ENSNGAG00000000088	Gm3854	63	37.931	ENSNGAG00000022025	Zfp423	72	37.931
ENSNGAG00000000088	Gm3854	66	50.923	ENSNGAG00000017870	Zfp768	50	50.923
ENSNGAG00000000088	Gm3854	61	42.373	ENSNGAG00000011316	Zfp384	54	42.105
ENSNGAG00000000088	Gm3854	99	51.525	ENSNGAG00000020695	Zfp26	89	51.525
ENSNGAG00000000088	Gm3854	61	46.875	ENSNGAG00000018317	Prdm5	67	46.875
ENSNGAG00000000088	Gm3854	95	55.939	ENSNGAG00000019166	Zfp94	95	55.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000088	Gm3854	99	79.630	ENSG00000018869	ZNF582	94	79.630	Homo_sapiens
ENSNGAG00000000088	Gm3854	98	78.351	ENSAMEG00000009560	ZNF582	95	78.351	Ailuropoda_melanoleuca
ENSNGAG00000000088	Gm3854	99	78.189	ENSANAG00000026033	ZNF582	89	78.189	Aotus_nancymaae
ENSNGAG00000000088	Gm3854	98	77.366	ENSBTAG00000030348	ZNF582	94	77.366	Bos_taurus
ENSNGAG00000000088	Gm3854	99	77.984	ENSCJAG00000020283	ZNF582	94	77.984	Callithrix_jacchus
ENSNGAG00000000088	Gm3854	98	77.366	ENSCHIG00000016463	-	94	77.273	Capra_hircus
ENSNGAG00000000088	Gm3854	98	78.807	ENSTSYG00000029281	ZNF582	94	78.807	Carlito_syrichta
ENSNGAG00000000088	Gm3854	98	75.565	ENSCPOG00000032242	-	94	75.565	Cavia_porcellus
ENSNGAG00000000088	Gm3854	99	78.189	ENSCCAG00000025711	ZNF582	94	78.189	Cebus_capucinus
ENSNGAG00000000088	Gm3854	99	78.395	ENSCATG00000036892	ZNF582	89	78.395	Cercocebus_atys
ENSNGAG00000000088	Gm3854	95	71.855	ENSCLAG00000000758	-	85	71.855	Chinchilla_lanigera
ENSNGAG00000000088	Gm3854	99	78.807	ENSCSAG00000001670	ZNF582	89	78.807	Chlorocebus_sabaeus
ENSNGAG00000000088	Gm3854	96	78.922	ENSCHOG00000012411	ZNF582	88	78.922	Choloepus_hoffmanni
ENSNGAG00000000088	Gm3854	99	78.395	ENSCANG00000037320	ZNF582	94	78.395	Colobus_angolensis_palliatus
ENSNGAG00000000088	Gm3854	92	72.331	ENSCGRG00001020646	Gm3854	94	72.331	Cricetulus_griseus_chok1gshd
ENSNGAG00000000088	Gm3854	92	72.331	ENSCGRG00000008411	Gm3854	94	72.331	Cricetulus_griseus_crigri
ENSNGAG00000000088	Gm3854	98	79.424	ENSEASG00005020473	ZNF582	94	79.424	Equus_asinus_asinus
ENSNGAG00000000088	Gm3854	90	79.505	ENSECAG00000011892	ZNF582	89	79.505	Equus_caballus
ENSNGAG00000000088	Gm3854	99	79.630	ENSGGOG00000003541	ZNF582	94	79.630	Gorilla_gorilla
ENSNGAG00000000088	Gm3854	98	79.630	ENSHGLG00000009291	-	95	79.630	Heterocephalus_glaber_female
ENSNGAG00000000088	Gm3854	98	79.630	ENSHGLG00100007619	ZNF582	95	79.630	Heterocephalus_glaber_male
ENSNGAG00000000088	Gm3854	99	79.012	ENSMFAG00000002728	ZNF582	94	79.012	Macaca_fascicularis
ENSNGAG00000000088	Gm3854	99	79.012	ENSMMUG00000000362	ZNF582	94	79.012	Macaca_mulatta
ENSNGAG00000000088	Gm3854	99	78.807	ENSMNEG00000028263	ZNF582	93	78.876	Macaca_nemestrina
ENSNGAG00000000088	Gm3854	99	78.601	ENSMLEG00000030585	ZNF582	94	78.601	Mandrillus_leucophaeus
ENSNGAG00000000088	Gm3854	98	80.041	ENSMICG00000012915	ZNF582	94	80.041	Microcebus_murinus
ENSNGAG00000000088	Gm3854	95	76.944	ENSMPUG00000006660	ZNF582	95	76.944	Mustela_putorius_furo
ENSNGAG00000000088	Gm3854	99	79.424	ENSNLEG00000010794	ZNF582	94	79.424	Nomascus_leucogenys
ENSNGAG00000000088	Gm3854	99	71.197	ENSODEG00000009980	ZNF582	99	71.197	Octodon_degus
ENSNGAG00000000088	Gm3854	98	78.512	ENSOCUG00000029075	ZNF582	95	78.512	Oryctolagus_cuniculus
ENSNGAG00000000088	Gm3854	99	79.630	ENSPPAG00000029277	ZNF582	94	79.630	Pan_paniscus
ENSNGAG00000000088	Gm3854	99	79.630	ENSPTRG00000011539	ZNF582	94	79.630	Pan_troglodytes
ENSNGAG00000000088	Gm3854	99	78.601	ENSPANG00000000398	ZNF582	94	78.601	Papio_anubis
ENSNGAG00000000088	Gm3854	99	78.807	ENSPPYG00000010446	ZNF582	85	78.807	Pongo_abelii
ENSNGAG00000000088	Gm3854	95	72.458	ENSPCAG00000000878	ZNF582	89	72.458	Procavia_capensis
ENSNGAG00000000088	Gm3854	98	80.864	ENSPCOG00000014863	ZNF582	94	80.864	Propithecus_coquereli
ENSNGAG00000000088	Gm3854	98	78.763	ENSRBIG00000042067	ZNF582	89	78.763	Rhinopithecus_bieti
ENSNGAG00000000088	Gm3854	98	78.763	ENSRROG00000036529	ZNF582	94	78.763	Rhinopithecus_roxellana
ENSNGAG00000000088	Gm3854	99	78.395	ENSSBOG00000024080	ZNF582	89	78.395	Saimiri_boliviensis_boliviensis
ENSNGAG00000000088	Gm3854	98	78.189	ENSSSCG00000003322	-	94	78.189	Sus_scrofa
ENSNGAG00000000088	Gm3854	98	80.041	ENSTTRG00000011290	ZNF582	85	80.041	Tursiops_truncatus
ENSNGAG00000000088	Gm3854	86	77.518	ENSUAMG00000010469	ZNF582	94	77.518	Ursus_americanus
ENSNGAG00000000088	Gm3854	86	77.752	ENSUMAG00000024767	-	94	77.752	Ursus_maritimus