EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000000441 (Gene tree)
Gene ID: 103742389
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 37062 bases
Position: chrKL202657.1:5313853-5350914
Accession: 103742389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000000572	ResIII	PF04851.15	7.8e-11	1	1
ENSNGAP00000000572	DEAD	PF00270.29	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000000583	-	4775	XM_008843447	ENSNGAP00000000572	1051 (aa)	XP_008841669	UPI0004ED23D8

Gene Model

Click here to download ENSNGAG00000000441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000000441	Smarca5	60	49.174	ENSNGAG00000014049	Hells	87	48.606
ENSNGAG00000000441	Smarca5	91	85.432	ENSNGAG00000006492	Smarca1	90	85.714
ENSNGAG00000000441	Smarca5	53	39.024	ENSNGAG00000000908	Chd1l	62	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000441	Smarca5	100	97.909	ENSG00000153147	SMARCA5	100	97.909	Homo_sapiens
ENSNGAG00000000441	Smarca5	100	98.004	ENSAMEG00000009585	SMARCA5	100	98.004	Ailuropoda_melanoleuca
ENSNGAG00000000441	Smarca5	92	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSNGAG00000000441	Smarca5	94	96.576	ENSACAG00000003038	SMARCA5	99	93.998	Anolis_carolinensis
ENSNGAG00000000441	Smarca5	100	97.909	ENSANAG00000019345	SMARCA5	99	99.197	Aotus_nancymaae
ENSNGAG00000000441	Smarca5	100	97.624	ENSBTAG00000003399	SMARCA5	100	97.624	Bos_taurus
ENSNGAG00000000441	Smarca5	100	98.004	ENSCJAG00000002735	SMARCA5	100	98.004	Callithrix_jacchus
ENSNGAG00000000441	Smarca5	100	98.004	ENSCAFG00000007525	SMARCA5	100	98.004	Canis_familiaris
ENSNGAG00000000441	Smarca5	98	97.965	ENSCAFG00020025641	SMARCA5	99	97.965	Canis_lupus_dingo
ENSNGAG00000000441	Smarca5	100	96.198	ENSCHIG00000016375	-	100	96.198	Capra_hircus
ENSNGAG00000000441	Smarca5	100	97.909	ENSCHIG00000013730	-	100	97.909	Capra_hircus
ENSNGAG00000000441	Smarca5	97	97.559	ENSTSYG00000009954	SMARCA5	99	99.396	Carlito_syrichta
ENSNGAG00000000441	Smarca5	92	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSNGAG00000000441	Smarca5	100	98.192	ENSCPOG00000002259	SMARCA5	100	98.192	Cavia_porcellus
ENSNGAG00000000441	Smarca5	100	98.004	ENSCCAG00000027215	SMARCA5	99	99.297	Cebus_capucinus
ENSNGAG00000000441	Smarca5	100	98.004	ENSCATG00000044917	SMARCA5	100	98.004	Cercocebus_atys
ENSNGAG00000000441	Smarca5	97	97.453	ENSCLAG00000006153	SMARCA5	100	99.698	Chinchilla_lanigera
ENSNGAG00000000441	Smarca5	92	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSNGAG00000000441	Smarca5	90	98.519	ENSCHOG00000011724	SMARCA5	89	98.519	Choloepus_hoffmanni
ENSNGAG00000000441	Smarca5	95	98.195	ENSCPBG00000027535	SMARCA5	98	96.680	Chrysemys_picta_bellii
ENSNGAG00000000441	Smarca5	100	97.814	ENSCANG00000041629	SMARCA5	100	97.814	Colobus_angolensis_palliatus
ENSNGAG00000000441	Smarca5	99	98.289	ENSCGRG00001012719	Smarca5	99	98.289	Cricetulus_griseus_chok1gshd
ENSNGAG00000000441	Smarca5	97	98.325	ENSCGRG00000001417	Smarca5	99	99.799	Cricetulus_griseus_crigri
ENSNGAG00000000441	Smarca5	98	94.956	ENSDNOG00000009158	SMARCA5	98	94.956	Dasypus_novemcinctus
ENSNGAG00000000441	Smarca5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSNGAG00000000441	Smarca5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSNGAG00000000441	Smarca5	100	98.289	ENSEASG00005001866	SMARCA5	100	98.289	Equus_asinus_asinus
ENSNGAG00000000441	Smarca5	100	98.289	ENSECAG00000002676	SMARCA5	100	98.289	Equus_caballus
ENSNGAG00000000441	Smarca5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSNGAG00000000441	Smarca5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSNGAG00000000441	Smarca5	100	98.004	ENSFCAG00000004544	SMARCA5	100	98.004	Felis_catus
ENSNGAG00000000441	Smarca5	92	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSNGAG00000000441	Smarca5	99	95.881	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSNGAG00000000441	Smarca5	99	85.413	ENSGMOG00000007519	SMARCA5	98	85.797	Gadus_morhua
ENSNGAG00000000441	Smarca5	95	97.490	ENSGALG00000009913	SMARCA5	99	94.696	Gallus_gallus
ENSNGAG00000000441	Smarca5	94	89.617	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSNGAG00000000441	Smarca5	96	97.431	ENSGAGG00000019882	SMARCA5	98	96.680	Gopherus_agassizii
ENSNGAG00000000441	Smarca5	100	97.909	ENSGGOG00000012595	SMARCA5	99	99.295	Gorilla_gorilla
ENSNGAG00000000441	Smarca5	96	89.751	ENSHGLG00000000317	-	96	89.751	Heterocephalus_glaber_female
ENSNGAG00000000441	Smarca5	100	97.812	ENSHGLG00000000816	-	99	97.812	Heterocephalus_glaber_female
ENSNGAG00000000441	Smarca5	96	98.510	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSNGAG00000000441	Smarca5	100	98.291	ENSSTOG00000010683	SMARCA5	99	98.291	Ictidomys_tridecemlineatus
ENSNGAG00000000441	Smarca5	100	97.716	ENSJJAG00000014965	Smarca5	100	97.716	Jaculus_jaculus
ENSNGAG00000000441	Smarca5	95	95.000	ENSLACG00000007091	SMARCA5	98	95.000	Latimeria_chalumnae
ENSNGAG00000000441	Smarca5	94	92.183	ENSLOCG00000008966	SMARCA5	98	90.792	Lepisosteus_oculatus
ENSNGAG00000000441	Smarca5	100	98.004	ENSLAFG00000007795	SMARCA5	100	98.004	Loxodonta_africana
ENSNGAG00000000441	Smarca5	100	98.004	ENSMFAG00000043649	SMARCA5	100	98.004	Macaca_fascicularis
ENSNGAG00000000441	Smarca5	100	98.004	ENSMMUG00000000829	SMARCA5	100	98.004	Macaca_mulatta
ENSNGAG00000000441	Smarca5	100	98.004	ENSMNEG00000031916	SMARCA5	100	98.004	Macaca_nemestrina
ENSNGAG00000000441	Smarca5	100	98.004	ENSMLEG00000042393	SMARCA5	100	98.004	Mandrillus_leucophaeus
ENSNGAG00000000441	Smarca5	95	97.000	ENSMGAG00000003517	SMARCA5	99	97.000	Meleagris_gallopavo
ENSNGAG00000000441	Smarca5	94	99.899	ENSMAUG00000015902	Smarca5	98	99.899	Mesocricetus_auratus
ENSNGAG00000000441	Smarca5	100	97.909	ENSMICG00000003971	SMARCA5	100	97.909	Microcebus_murinus
ENSNGAG00000000441	Smarca5	99	98.287	ENSMOCG00000016986	-	99	98.287	Microtus_ochrogaster
ENSNGAG00000000441	Smarca5	100	96.209	ENSMODG00000000391	SMARCA5	98	96.899	Monodelphis_domestica
ENSNGAG00000000441	Smarca5	100	98.953	ENSMUSG00000031715	Smarca5	100	98.953	Mus_musculus
ENSNGAG00000000441	Smarca5	100	99.144	MGP_PahariEiJ_G0022862	Smarca5	100	99.144	Mus_pahari
ENSNGAG00000000441	Smarca5	100	98.289	ENSMLUG00000000468	SMARCA5	100	98.289	Myotis_lucifugus
ENSNGAG00000000441	Smarca5	100	98.004	ENSNLEG00000005383	SMARCA5	100	98.004	Nomascus_leucogenys
ENSNGAG00000000441	Smarca5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSNGAG00000000441	Smarca5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSNGAG00000000441	Smarca5	92	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSNGAG00000000441	Smarca5	92	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSNGAG00000000441	Smarca5	100	97.909	ENSOGAG00000009702	SMARCA5	100	97.909	Otolemur_garnettii
ENSNGAG00000000441	Smarca5	99	97.716	ENSOARG00000010589	SMARCA5	99	97.716	Ovis_aries
ENSNGAG00000000441	Smarca5	100	97.719	ENSPPAG00000028523	SMARCA5	99	99.194	Pan_paniscus
ENSNGAG00000000441	Smarca5	97	92.773	ENSPPRG00000004925	SMARCA5	98	93.133	Panthera_pardus
ENSNGAG00000000441	Smarca5	96	98.814	ENSPTIG00000020959	SMARCA5	97	98.814	Panthera_tigris_altaica
ENSNGAG00000000441	Smarca5	100	97.814	ENSPTRG00000016472	SMARCA5	99	99.295	Pan_troglodytes
ENSNGAG00000000441	Smarca5	100	98.004	ENSPANG00000001175	SMARCA5	100	98.004	Papio_anubis
ENSNGAG00000000441	Smarca5	95	89.447	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSNGAG00000000441	Smarca5	95	89.066	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSNGAG00000000441	Smarca5	95	95.988	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSNGAG00000000441	Smarca5	92	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSNGAG00000000441	Smarca5	97	98.227	ENSPEMG00000008060	Smarca5	99	98.227	Peromyscus_maniculatus_bairdii
ENSNGAG00000000441	Smarca5	96	69.595	ENSPMAG00000006011	SMARCA5	83	83.645	Petromyzon_marinus
ENSNGAG00000000441	Smarca5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSNGAG00000000441	Smarca5	100	95.549	ENSPCIG00000003926	SMARCA5	97	96.705	Phascolarctos_cinereus
ENSNGAG00000000441	Smarca5	100	98.099	ENSPPYG00000015091	SMARCA5	100	98.099	Pongo_abelii
ENSNGAG00000000441	Smarca5	86	88.756	ENSPCAG00000014230	SMARCA5	90	88.989	Procavia_capensis
ENSNGAG00000000441	Smarca5	100	95.152	ENSPCOG00000026744	SMARCA5	100	95.152	Propithecus_coquereli
ENSNGAG00000000441	Smarca5	99	98.095	ENSPVAG00000006482	SMARCA5	100	98.095	Pteropus_vampyrus
ENSNGAG00000000441	Smarca5	97	88.137	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSNGAG00000000441	Smarca5	95	99.899	ENSRNOG00000018149	Smarca5	100	99.899	Rattus_norvegicus
ENSNGAG00000000441	Smarca5	100	97.816	ENSRBIG00000044644	SMARCA5	100	97.816	Rhinopithecus_bieti
ENSNGAG00000000441	Smarca5	98	97.677	ENSRROG00000029591	SMARCA5	99	99.296	Rhinopithecus_roxellana
ENSNGAG00000000441	Smarca5	100	98.099	ENSSBOG00000036257	SMARCA5	100	98.099	Saimiri_boliviensis_boliviensis
ENSNGAG00000000441	Smarca5	94	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSNGAG00000000441	Smarca5	100	86.312	ENSSFOG00015013252	SMARCA5	97	89.731	Scleropages_formosus
ENSNGAG00000000441	Smarca5	98	93.605	ENSSPUG00000007604	SMARCA5	99	96.281	Sphenodon_punctatus
ENSNGAG00000000441	Smarca5	100	98.004	ENSSSCG00000009047	SMARCA5	100	98.004	Sus_scrofa
ENSNGAG00000000441	Smarca5	96	96.226	ENSTGUG00000002408	SMARCA5	99	96.226	Taeniopygia_guttata
ENSNGAG00000000441	Smarca5	98	97.868	ENSUAMG00000023495	SMARCA5	99	97.868	Ursus_americanus
ENSNGAG00000000441	Smarca5	95	99.202	ENSUMAG00000015324	SMARCA5	97	99.202	Ursus_maritimus
ENSNGAG00000000441	Smarca5	100	97.909	ENSVPAG00000008982	SMARCA5	100	97.909	Vicugna_pacos
ENSNGAG00000000441	Smarca5	100	98.004	ENSVVUG00000017473	SMARCA5	100	98.004	Vulpes_vulpes
ENSNGAG00000000441	Smarca5	95	89.289	ENSXETG00000017566	smarca5	97	91.718	Xenopus_tropicalis