EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000000468 (Gene tree)
Gene ID: 103734561
Gene Symbol: Prpf4
Alias: 1600015H11Rik
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 18808 bases
Position: chrKL200917.1:10083679-10102486
Accession: 103734561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000000646	PRP4	PF08799.11	3.9e-14	1	1
ENSNGAP00000000635	PRP4	PF08799.11	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000000659	-	1398	-	ENSNGAP00000000646	465 (aa)	-	-
ENSNGAT00000000648	-	1859	XM_008833545	ENSNGAP00000000635	491 (aa)	XP_008831767	UPI0004ED28AD

Gene Model

Click here to download ENSNGAG00000000468's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000000468	Prpf4	56	30.189	ENSNGAG00000013754	Wdr5b	91	30.189
ENSNGAG00000000468	Prpf4	53	34.746	ENSNGAG00000019321	Poc1b	67	34.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000468	Prpf4	100	93.858	ENSG00000136875	PRPF4	100	93.858	Homo_sapiens
ENSNGAG00000000468	Prpf4	96	71.967	ENSAPOG00000014132	prpf4	98	71.967	Acanthochromis_polyacanthus
ENSNGAG00000000468	Prpf4	100	94.050	ENSAMEG00000013048	PRPF4	98	94.050	Ailuropoda_melanoleuca
ENSNGAG00000000468	Prpf4	96	72.024	ENSACIG00000005579	prpf4	99	72.024	Amphilophus_citrinellus
ENSNGAG00000000468	Prpf4	96	71.683	ENSAOCG00000005457	prpf4	99	71.683	Amphiprion_ocellaris
ENSNGAG00000000468	Prpf4	96	71.485	ENSAPEG00000000776	prpf4	99	71.485	Amphiprion_percula
ENSNGAG00000000468	Prpf4	96	71.429	ENSATEG00000023013	prpf4	99	71.429	Anabas_testudineus
ENSNGAG00000000468	Prpf4	100	83.877	ENSAPLG00000006534	PRPF4	97	83.877	Anas_platyrhynchos
ENSNGAG00000000468	Prpf4	100	84.512	ENSACAG00000015110	PRPF4	100	84.512	Anolis_carolinensis
ENSNGAG00000000468	Prpf4	100	94.242	ENSANAG00000022464	PRPF4	96	94.242	Aotus_nancymaae
ENSNGAG00000000468	Prpf4	96	71.825	ENSACLG00000019031	prpf4	99	71.825	Astatotilapia_calliptera
ENSNGAG00000000468	Prpf4	97	73.706	ENSAMXG00000006756	prpf4	99	73.706	Astyanax_mexicanus
ENSNGAG00000000468	Prpf4	100	93.474	ENSBTAG00000004571	PRPF4	100	93.474	Bos_taurus
ENSNGAG00000000468	Prpf4	90	41.561	WBGene00007972	prp-4	96	41.474	Caenorhabditis_elegans
ENSNGAG00000000468	Prpf4	100	94.061	ENSCJAG00000017856	PRPF4	100	94.061	Callithrix_jacchus
ENSNGAG00000000468	Prpf4	100	94.050	ENSCAFG00000003224	PRPF4	97	94.050	Canis_familiaris
ENSNGAG00000000468	Prpf4	100	94.050	ENSCAFG00020022637	PRPF4	100	94.050	Canis_lupus_dingo
ENSNGAG00000000468	Prpf4	100	93.487	ENSCHIG00000024648	-	100	93.487	Capra_hircus
ENSNGAG00000000468	Prpf4	100	93.858	ENSTSYG00000010366	PRPF4	100	93.858	Carlito_syrichta
ENSNGAG00000000468	Prpf4	86	82.482	ENSCAPG00000008935	PRPF4	97	81.384	Cavia_aperea
ENSNGAG00000000468	Prpf4	100	93.474	ENSCPOG00000010747	-	100	93.474	Cavia_porcellus
ENSNGAG00000000468	Prpf4	100	87.524	ENSCPOG00000014729	-	100	87.524	Cavia_porcellus
ENSNGAG00000000468	Prpf4	100	94.050	ENSCCAG00000028990	PRPF4	100	94.050	Cebus_capucinus
ENSNGAG00000000468	Prpf4	100	93.858	ENSCATG00000021552	PRPF4	100	93.858	Cercocebus_atys
ENSNGAG00000000468	Prpf4	100	93.666	ENSCLAG00000013448	PRPF4	100	93.666	Chinchilla_lanigera
ENSNGAG00000000468	Prpf4	86	89.135	ENSCHOG00000007233	PRPF4	100	89.135	Choloepus_hoffmanni
ENSNGAG00000000468	Prpf4	99	85.825	ENSCPBG00000019136	PRPF4	74	85.825	Chrysemys_picta_bellii
ENSNGAG00000000468	Prpf4	96	54.921	ENSCING00000001299	-	97	54.257	Ciona_intestinalis
ENSNGAG00000000468	Prpf4	96	52.976	ENSCSAVG00000009178	-	99	53.896	Ciona_savignyi
ENSNGAG00000000468	Prpf4	100	94.050	ENSCANG00000003246	PRPF4	100	94.050	Colobus_angolensis_palliatus
ENSNGAG00000000468	Prpf4	100	93.858	ENSCGRG00001016992	Prpf4	100	93.858	Cricetulus_griseus_chok1gshd
ENSNGAG00000000468	Prpf4	100	93.858	ENSCGRG00000017560	Prpf4	100	93.858	Cricetulus_griseus_crigri
ENSNGAG00000000468	Prpf4	97	70.693	ENSCSEG00000020451	prpf4	99	70.693	Cynoglossus_semilaevis
ENSNGAG00000000468	Prpf4	97	74.653	ENSDARG00000067639	prpf4	99	74.653	Danio_rerio
ENSNGAG00000000468	Prpf4	100	93.487	ENSDNOG00000013203	PRPF4	100	93.487	Dasypus_novemcinctus
ENSNGAG00000000468	Prpf4	100	93.858	ENSDORG00000026275	Prpf4	100	93.858	Dipodomys_ordii
ENSNGAG00000000468	Prpf4	86	52.735	FBgn0036733	U4-U6-60K	99	47.263	Drosophila_melanogaster
ENSNGAG00000000468	Prpf4	100	91.969	ENSETEG00000020389	PRPF4	100	91.969	Echinops_telfairi
ENSNGAG00000000468	Prpf4	95	67.051	ENSEBUG00000015229	prpf4	86	67.512	Eptatretus_burgeri
ENSNGAG00000000468	Prpf4	100	94.242	ENSEASG00005022678	PRPF4	100	94.242	Equus_asinus_asinus
ENSNGAG00000000468	Prpf4	100	94.242	ENSECAG00000007072	PRPF4	100	94.242	Equus_caballus
ENSNGAG00000000468	Prpf4	85	86.611	ENSEEUG00000007480	PRPF4	84	86.611	Erinaceus_europaeus
ENSNGAG00000000468	Prpf4	97	75.446	ENSELUG00000007510	prpf4	99	75.446	Esox_lucius
ENSNGAG00000000468	Prpf4	100	94.061	ENSFCAG00000005514	PRPF4	100	94.061	Felis_catus
ENSNGAG00000000468	Prpf4	98	82.287	ENSFALG00000005423	PRPF4	90	79.785	Ficedula_albicollis
ENSNGAG00000000468	Prpf4	100	93.474	ENSFDAG00000005839	PRPF4	100	93.474	Fukomys_damarensis
ENSNGAG00000000468	Prpf4	96	71.032	ENSFHEG00000001300	prpf4	99	71.032	Fundulus_heteroclitus
ENSNGAG00000000468	Prpf4	98	84.736	ENSGALG00000008857	PRPF4	96	84.109	Gallus_gallus
ENSNGAG00000000468	Prpf4	77	62.953	ENSGAFG00000012164	prpf4	70	64.387	Gambusia_affinis
ENSNGAG00000000468	Prpf4	96	64.683	ENSGACG00000015476	prpf4	99	63.889	Gasterosteus_aculeatus
ENSNGAG00000000468	Prpf4	99	85.631	ENSGAGG00000025029	PRPF4	95	85.631	Gopherus_agassizii
ENSNGAG00000000468	Prpf4	100	93.858	ENSGGOG00000006943	PRPF4	100	93.858	Gorilla_gorilla
ENSNGAG00000000468	Prpf4	96	71.627	ENSHBUG00000000562	prpf4	99	71.627	Haplochromis_burtoni
ENSNGAG00000000468	Prpf4	100	79.223	ENSHGLG00000016628	-	100	80.000	Heterocephalus_glaber_female
ENSNGAG00000000468	Prpf4	100	75.240	ENSHGLG00000003838	-	100	75.240	Heterocephalus_glaber_female
ENSNGAG00000000468	Prpf4	100	93.474	ENSHGLG00000015191	PRPF4	100	93.474	Heterocephalus_glaber_female
ENSNGAG00000000468	Prpf4	100	75.240	ENSHGLG00100005571	-	100	75.240	Heterocephalus_glaber_male
ENSNGAG00000000468	Prpf4	97	73.465	ENSIPUG00000017956	PRPF4	99	73.465	Ictalurus_punctatus
ENSNGAG00000000468	Prpf4	100	93.666	ENSSTOG00000027833	PRPF4	100	93.666	Ictidomys_tridecemlineatus
ENSNGAG00000000468	Prpf4	100	93.858	ENSJJAG00000008838	Prpf4	100	93.858	Jaculus_jaculus
ENSNGAG00000000468	Prpf4	96	71.032	ENSKMAG00000013236	prpf4	99	71.032	Kryptolebias_marmoratus
ENSNGAG00000000468	Prpf4	96	70.916	ENSLBEG00000020611	prpf4	99	70.916	Labrus_bergylta
ENSNGAG00000000468	Prpf4	99	74.759	ENSLACG00000016317	PRPF4	99	74.759	Latimeria_chalumnae
ENSNGAG00000000468	Prpf4	97	76.436	ENSLOCG00000000581	prpf4	99	76.436	Lepisosteus_oculatus
ENSNGAG00000000468	Prpf4	100	93.295	ENSLAFG00000018225	PRPF4	100	93.295	Loxodonta_africana
ENSNGAG00000000468	Prpf4	100	93.666	ENSMFAG00000039397	PRPF4	100	93.666	Macaca_fascicularis
ENSNGAG00000000468	Prpf4	100	93.858	ENSMMUG00000005844	PRPF4	100	93.858	Macaca_mulatta
ENSNGAG00000000468	Prpf4	100	87.255	ENSMNEG00000033737	PRPF4	100	87.255	Macaca_nemestrina
ENSNGAG00000000468	Prpf4	100	93.858	ENSMLEG00000040284	PRPF4	100	93.858	Mandrillus_leucophaeus
ENSNGAG00000000468	Prpf4	97	71.006	ENSMAMG00000020141	prpf4	99	71.006	Mastacembelus_armatus
ENSNGAG00000000468	Prpf4	96	71.825	ENSMZEG00005023205	prpf4	99	71.825	Maylandia_zebra
ENSNGAG00000000468	Prpf4	99	83.077	ENSMGAG00000001796	PRPF4	97	83.077	Meleagris_gallopavo
ENSNGAG00000000468	Prpf4	100	93.282	ENSMAUG00000018022	Prpf4	100	93.282	Mesocricetus_auratus
ENSNGAG00000000468	Prpf4	100	93.090	ENSMICG00000015022	PRPF4	100	92.912	Microcebus_murinus
ENSNGAG00000000468	Prpf4	100	93.282	ENSMOCG00000018273	Prpf4	100	93.282	Microtus_ochrogaster
ENSNGAG00000000468	Prpf4	97	69.901	ENSMMOG00000021177	prpf4	99	69.901	Mola_mola
ENSNGAG00000000468	Prpf4	100	89.484	ENSMODG00000004444	-	100	89.484	Monodelphis_domestica
ENSNGAG00000000468	Prpf4	100	89.675	ENSMODG00000025096	-	97	89.675	Monodelphis_domestica
ENSNGAG00000000468	Prpf4	96	71.429	ENSMALG00000013624	prpf4	99	71.429	Monopterus_albus
ENSNGAG00000000468	Prpf4	100	93.666	MGP_CAROLIEiJ_G0026078	Prpf4	100	93.666	Mus_caroli
ENSNGAG00000000468	Prpf4	100	93.666	ENSMUSG00000066148	Prpf4	100	93.666	Mus_musculus
ENSNGAG00000000468	Prpf4	100	93.474	MGP_PahariEiJ_G0028413	Prpf4	100	93.474	Mus_pahari
ENSNGAG00000000468	Prpf4	100	93.666	MGP_SPRETEiJ_G0027042	Prpf4	100	93.666	Mus_spretus
ENSNGAG00000000468	Prpf4	100	94.050	ENSMPUG00000007883	PRPF4	100	94.050	Mustela_putorius_furo
ENSNGAG00000000468	Prpf4	100	93.666	ENSMLUG00000015309	-	97	93.666	Myotis_lucifugus
ENSNGAG00000000468	Prpf4	100	91.939	ENSMLUG00000008626	-	97	91.939	Myotis_lucifugus
ENSNGAG00000000468	Prpf4	96	72.024	ENSNBRG00000007972	prpf4	99	72.024	Neolamprologus_brichardi
ENSNGAG00000000468	Prpf4	100	94.242	ENSNLEG00000016647	PRPF4	100	94.242	Nomascus_leucogenys
ENSNGAG00000000468	Prpf4	99	89.494	ENSMEUG00000013256	PRPF4	100	89.494	Notamacropus_eugenii
ENSNGAG00000000468	Prpf4	100	93.295	ENSOPRG00000005302	PRPF4	100	93.295	Ochotona_princeps
ENSNGAG00000000468	Prpf4	100	93.858	ENSODEG00000018147	PRPF4	100	93.858	Octodon_degus
ENSNGAG00000000468	Prpf4	96	71.825	ENSONIG00000012671	prpf4	99	71.825	Oreochromis_niloticus
ENSNGAG00000000468	Prpf4	100	94.050	ENSOCUG00000005046	PRPF4	100	94.050	Oryctolagus_cuniculus
ENSNGAG00000000468	Prpf4	96	69.721	ENSORLG00000019641	prpf4	99	69.721	Oryzias_latipes
ENSNGAG00000000468	Prpf4	96	69.721	ENSORLG00020019438	prpf4	99	69.721	Oryzias_latipes_hni
ENSNGAG00000000468	Prpf4	96	69.323	ENSOMEG00000020941	prpf4	99	69.263	Oryzias_melastigma
ENSNGAG00000000468	Prpf4	100	93.269	ENSOGAG00000007802	PRPF4	98	93.269	Otolemur_garnettii
ENSNGAG00000000468	Prpf4	100	93.666	ENSOARG00000006319	PRPF4	97	93.666	Ovis_aries
ENSNGAG00000000468	Prpf4	100	93.858	ENSPPAG00000041797	PRPF4	100	93.858	Pan_paniscus
ENSNGAG00000000468	Prpf4	100	94.242	ENSPPRG00000014360	PRPF4	100	94.242	Panthera_pardus
ENSNGAG00000000468	Prpf4	100	94.242	ENSPTIG00000009574	PRPF4	100	94.242	Panthera_tigris_altaica
ENSNGAG00000000468	Prpf4	100	93.858	ENSPTRG00000021274	PRPF4	100	93.678	Pan_troglodytes
ENSNGAG00000000468	Prpf4	100	93.666	ENSPANG00000025776	PRPF4	96	93.666	Papio_anubis
ENSNGAG00000000468	Prpf4	97	76.040	ENSPKIG00000017259	prpf4	99	76.040	Paramormyrops_kingsleyae
ENSNGAG00000000468	Prpf4	100	84.453	ENSPSIG00000010713	PRPF4	91	84.942	Pelodiscus_sinensis
ENSNGAG00000000468	Prpf4	99	61.272	ENSPMGG00000000997	prpf4	99	61.390	Periophthalmus_magnuspinnatus
ENSNGAG00000000468	Prpf4	100	93.858	ENSPEMG00000024115	Prpf4	100	93.858	Peromyscus_maniculatus_bairdii
ENSNGAG00000000468	Prpf4	99	89.494	ENSPCIG00000003821	PRPF4	99	89.494	Phascolarctos_cinereus
ENSNGAG00000000468	Prpf4	96	63.776	ENSPFOG00000013524	prpf4	97	66.066	Poecilia_formosa
ENSNGAG00000000468	Prpf4	90	64.793	ENSPLAG00000011620	prpf4	96	65.165	Poecilia_latipinna
ENSNGAG00000000468	Prpf4	95	65.407	ENSPMEG00000006813	prpf4	98	65.407	Poecilia_mexicana
ENSNGAG00000000468	Prpf4	98	93.567	ENSPCAG00000002561	PRPF4	99	93.567	Procavia_capensis
ENSNGAG00000000468	Prpf4	100	93.666	ENSPCOG00000011975	PRPF4	100	93.666	Propithecus_coquereli
ENSNGAG00000000468	Prpf4	100	90.038	ENSPVAG00000004708	PRPF4	100	90.038	Pteropus_vampyrus
ENSNGAG00000000468	Prpf4	96	71.825	ENSPNYG00000008013	prpf4	99	71.825	Pundamilia_nyererei
ENSNGAG00000000468	Prpf4	97	75.050	ENSPNAG00000000697	prpf4	99	75.050	Pygocentrus_nattereri
ENSNGAG00000000468	Prpf4	100	93.474	ENSRNOG00000014777	Prpf4	100	93.474	Rattus_norvegicus
ENSNGAG00000000468	Prpf4	100	94.050	ENSRBIG00000040221	PRPF4	100	94.050	Rhinopithecus_bieti
ENSNGAG00000000468	Prpf4	100	94.050	ENSRROG00000040240	PRPF4	100	94.050	Rhinopithecus_roxellana
ENSNGAG00000000468	Prpf4	100	90.057	ENSSHAG00000017658	PRPF4	100	90.057	Sarcophilus_harrisii
ENSNGAG00000000468	Prpf4	97	76.634	ENSSFOG00015008963	prpf4	99	76.634	Scleropages_formosus
ENSNGAG00000000468	Prpf4	96	70.635	ENSSMAG00000008889	prpf4	99	70.635	Scophthalmus_maximus
ENSNGAG00000000468	Prpf4	96	68.327	ENSSDUG00000022083	prpf4	98	68.526	Seriola_dumerili
ENSNGAG00000000468	Prpf4	96	68.526	ENSSLDG00000008115	prpf4	98	68.725	Seriola_lalandi_dorsalis
ENSNGAG00000000468	Prpf4	100	85.029	ENSSPUG00000015582	PRPF4	100	85.029	Sphenodon_punctatus
ENSNGAG00000000468	Prpf4	96	66.075	ENSSPAG00000011286	prpf4	99	66.075	Stegastes_partitus
ENSNGAG00000000468	Prpf4	100	94.242	ENSSSCG00000024648	PRPF4	100	94.242	Sus_scrofa
ENSNGAG00000000468	Prpf4	94	84.787	ENSTGUG00000002623	PRPF4	100	85.072	Taeniopygia_guttata
ENSNGAG00000000468	Prpf4	97	70.158	ENSTRUG00000008853	prpf4	99	70.158	Takifugu_rubripes
ENSNGAG00000000468	Prpf4	97	69.505	ENSTNIG00000013250	prpf4	99	69.505	Tetraodon_nigroviridis
ENSNGAG00000000468	Prpf4	100	85.057	ENSTBEG00000000821	PRPF4	100	85.057	Tupaia_belangeri
ENSNGAG00000000468	Prpf4	81	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSNGAG00000000468	Prpf4	77	85.674	ENSUAMG00000018288	PRPF4	91	88.506	Ursus_americanus
ENSNGAG00000000468	Prpf4	100	93.282	ENSUMAG00000019375	PRPF4	100	93.282	Ursus_maritimus
ENSNGAG00000000468	Prpf4	100	93.487	ENSVPAG00000005281	PRPF4	100	93.487	Vicugna_pacos
ENSNGAG00000000468	Prpf4	100	92.952	ENSVVUG00000002476	PRPF4	100	92.952	Vulpes_vulpes
ENSNGAG00000000468	Prpf4	75	58.602	ENSXCOG00000006101	prpf4	93	58.221	Xiphophorus_couchianus
ENSNGAG00000000468	Prpf4	96	64.905	ENSXMAG00000002750	prpf4	98	64.905	Xiphophorus_maculatus