EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000000580 (Gene tree)
Gene ID: 103749255
Gene Symbol: Prdm10
Alias: LOC382066|tristanin
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 79129 bases
Position: chrKL204361.1:998842-1077970
Accession: 103749255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000000826	zf-C2H2	PF00096.26	2.5e-33	1	5
ENSNGAP00000000826	zf-C2H2	PF00096.26	2.5e-33	2	5
ENSNGAP00000000826	zf-C2H2	PF00096.26	2.5e-33	3	5
ENSNGAP00000000826	zf-C2H2	PF00096.26	2.5e-33	4	5
ENSNGAP00000000826	zf-C2H2	PF00096.26	2.5e-33	5	5
ENSNGAP00000000822	zf-C2H2	PF00096.26	5.8e-33	1	5
ENSNGAP00000000822	zf-C2H2	PF00096.26	5.8e-33	2	5
ENSNGAP00000000822	zf-C2H2	PF00096.26	5.8e-33	3	5
ENSNGAP00000000822	zf-C2H2	PF00096.26	5.8e-33	4	5
ENSNGAP00000000822	zf-C2H2	PF00096.26	5.8e-33	5	5
ENSNGAP00000000826	zf-met	PF12874.7	6.5e-06	1	2
ENSNGAP00000000826	zf-met	PF12874.7	6.5e-06	2	2
ENSNGAP00000000822	zf-met	PF12874.7	8.2e-06	1	2
ENSNGAP00000000822	zf-met	PF12874.7	8.2e-06	2	2
ENSNGAP00000000826	zf-C2H2_jaz	PF12171.8	2.2e-17	1	1
ENSNGAP00000000822	zf-C2H2_jaz	PF12171.8	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000000836	-	3429	XM_017802922	ENSNGAP00000000822	1142 (aa)	XP_017658411	-
ENSNGAT00000000840	-	3195	-	ENSNGAP00000000826	1064 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000000580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000000580	Prdm10	52	38.393	ENSNGAG00000011056	Zfp236	63	38.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000580	Prdm10	100	95.156	ENSG00000170325	PRDM10	99	96.647	Homo_sapiens
ENSNGAG00000000580	Prdm10	99	94.434	ENSAMEG00000002425	PRDM10	100	90.460	Ailuropoda_melanoleuca
ENSNGAG00000000580	Prdm10	100	84.715	ENSAPLG00000004858	PRDM10	100	84.888	Anas_platyrhynchos
ENSNGAG00000000580	Prdm10	100	76.486	ENSANAG00000022064	PRDM10	100	80.242	Aotus_nancymaae
ENSNGAG00000000580	Prdm10	100	92.975	ENSBTAG00000019001	PRDM10	100	92.788	Bos_taurus
ENSNGAG00000000580	Prdm10	100	95.489	ENSCJAG00000009235	PRDM10	100	94.978	Callithrix_jacchus
ENSNGAG00000000580	Prdm10	100	93.886	ENSCAFG00000010164	PRDM10	100	93.886	Canis_familiaris
ENSNGAG00000000580	Prdm10	100	92.710	ENSCAFG00020010152	PRDM10	96	97.333	Canis_lupus_dingo
ENSNGAG00000000580	Prdm10	100	93.322	ENSCHIG00000026530	PRDM10	100	93.056	Capra_hircus
ENSNGAG00000000580	Prdm10	99	97.264	ENSTSYG00000000544	PRDM10	100	96.107	Carlito_syrichta
ENSNGAG00000000580	Prdm10	100	86.630	ENSCAPG00000017296	PRDM10	100	85.838	Cavia_aperea
ENSNGAG00000000580	Prdm10	92	86.449	ENSCPOG00000000389	PRDM10	99	77.417	Cavia_porcellus
ENSNGAG00000000580	Prdm10	100	94.892	ENSCCAG00000024567	PRDM10	100	94.892	Cebus_capucinus
ENSNGAG00000000580	Prdm10	100	95.677	ENSCATG00000040031	PRDM10	100	95.321	Cercocebus_atys
ENSNGAG00000000580	Prdm10	100	92.235	ENSCLAG00000014605	PRDM10	100	92.494	Chinchilla_lanigera
ENSNGAG00000000580	Prdm10	100	95.581	ENSCSAG00000002202	PRDM10	100	95.581	Chlorocebus_sabaeus
ENSNGAG00000000580	Prdm10	99	85.084	ENSCPBG00000026880	PRDM10	99	81.803	Chrysemys_picta_bellii
ENSNGAG00000000580	Prdm10	100	95.238	ENSCANG00000032669	PRDM10	100	95.238	Colobus_angolensis_palliatus
ENSNGAG00000000580	Prdm10	100	95.990	ENSCGRG00001021647	Prdm10	98	95.990	Cricetulus_griseus_chok1gshd
ENSNGAG00000000580	Prdm10	100	95.990	ENSCGRG00000006562	Prdm10	98	95.990	Cricetulus_griseus_crigri
ENSNGAG00000000580	Prdm10	82	93.776	ENSDNOG00000001366	PRDM10	95	93.776	Dasypus_novemcinctus
ENSNGAG00000000580	Prdm10	100	95.633	ENSDORG00000014292	Prdm10	100	95.721	Dipodomys_ordii
ENSNGAG00000000580	Prdm10	100	94.102	ENSEASG00005022914	PRDM10	100	93.929	Equus_asinus_asinus
ENSNGAG00000000580	Prdm10	100	94.267	ENSECAG00000011499	PRDM10	100	94.173	Equus_caballus
ENSNGAG00000000580	Prdm10	99	94.434	ENSFCAG00000004111	PRDM10	96	93.988	Felis_catus
ENSNGAG00000000580	Prdm10	99	85.136	ENSFALG00000004873	PRDM10	100	81.104	Ficedula_albicollis
ENSNGAG00000000580	Prdm10	100	92.078	ENSFDAG00000017311	PRDM10	100	91.993	Fukomys_damarensis
ENSNGAG00000000580	Prdm10	99	85.553	ENSGALG00000033660	PRDM10	99	84.906	Gallus_gallus
ENSNGAG00000000580	Prdm10	98	60.783	ENSGACG00000012293	prdm10	100	59.117	Gasterosteus_aculeatus
ENSNGAG00000000580	Prdm10	100	83.061	ENSGAGG00000012523	PRDM10	99	83.061	Gopherus_agassizii
ENSNGAG00000000580	Prdm10	100	96.080	ENSGGOG00000015359	PRDM10	100	96.080	Gorilla_gorilla
ENSNGAG00000000580	Prdm10	100	92.624	ENSHGLG00000001106	PRDM10	100	92.796	Heterocephalus_glaber_female
ENSNGAG00000000580	Prdm10	100	92.955	ENSHGLG00100002350	PRDM10	100	92.955	Heterocephalus_glaber_male
ENSNGAG00000000580	Prdm10	100	95.931	ENSSTOG00000002015	PRDM10	100	95.931	Ictidomys_tridecemlineatus
ENSNGAG00000000580	Prdm10	82	94.603	ENSJJAG00000021493	Prdm10	90	93.983	Jaculus_jaculus
ENSNGAG00000000580	Prdm10	99	91.463	ENSLAFG00000031867	PRDM10	100	90.198	Loxodonta_africana
ENSNGAG00000000580	Prdm10	100	95.865	ENSMFAG00000031008	PRDM10	100	95.581	Macaca_fascicularis
ENSNGAG00000000580	Prdm10	100	95.865	ENSMMUG00000017555	PRDM10	100	95.581	Macaca_mulatta
ENSNGAG00000000580	Prdm10	100	95.771	ENSMNEG00000036493	PRDM10	100	95.407	Macaca_nemestrina
ENSNGAG00000000580	Prdm10	94	94.304	ENSMLEG00000042028	PRDM10	98	95.333	Mandrillus_leucophaeus
ENSNGAG00000000580	Prdm10	99	85.419	ENSMGAG00000001112	PRDM10	100	81.674	Meleagris_gallopavo
ENSNGAG00000000580	Prdm10	100	95.061	ENSMICG00000013888	PRDM10	100	95.147	Microcebus_murinus
ENSNGAG00000000580	Prdm10	100	93.595	ENSMOCG00000021853	Prdm10	100	93.595	Microtus_ochrogaster
ENSNGAG00000000580	Prdm10	82	87.797	ENSMODG00000004979	PRDM10	99	87.188	Monodelphis_domestica
ENSNGAG00000000580	Prdm10	100	94.113	ENSMUSG00000042496	Prdm10	100	94.113	Mus_musculus
ENSNGAG00000000580	Prdm10	100	94.783	MGP_SPRETEiJ_G0033061	-	100	94.870	Mus_spretus
ENSNGAG00000000580	Prdm10	100	93.755	ENSMPUG00000008711	PRDM10	99	93.755	Mustela_putorius_furo
ENSNGAG00000000580	Prdm10	100	92.727	ENSMLUG00000013051	PRDM10	100	92.727	Myotis_lucifugus
ENSNGAG00000000580	Prdm10	100	95.677	ENSNLEG00000007488	PRDM10	100	95.321	Nomascus_leucogenys
ENSNGAG00000000580	Prdm10	100	91.610	ENSODEG00000005309	PRDM10	100	91.438	Octodon_degus
ENSNGAG00000000580	Prdm10	99	79.871	ENSOANG00000000577	-	100	78.072	Ornithorhynchus_anatinus
ENSNGAG00000000580	Prdm10	100	93.403	ENSOCUG00000003736	PRDM10	100	93.142	Oryctolagus_cuniculus
ENSNGAG00000000580	Prdm10	100	93.696	ENSOGAG00000010723	PRDM10	100	93.610	Otolemur_garnettii
ENSNGAG00000000580	Prdm10	100	93.322	ENSOARG00000014507	PRDM10	100	93.056	Ovis_aries
ENSNGAG00000000580	Prdm10	100	95.906	ENSPPAG00000042881	PRDM10	100	95.906	Pan_paniscus
ENSNGAG00000000580	Prdm10	100	93.669	ENSPPRG00000007002	PRDM10	100	93.669	Panthera_pardus
ENSNGAG00000000580	Prdm10	100	93.755	ENSPTIG00000013331	PRDM10	100	93.755	Panthera_tigris_altaica
ENSNGAG00000000580	Prdm10	100	95.906	ENSPTRG00000004477	PRDM10	100	95.906	Pan_troglodytes
ENSNGAG00000000580	Prdm10	100	95.677	ENSPANG00000017470	PRDM10	100	95.321	Papio_anubis
ENSNGAG00000000580	Prdm10	100	93.745	ENSPEMG00000014985	Prdm10	100	93.573	Peromyscus_maniculatus_bairdii
ENSNGAG00000000580	Prdm10	100	95.415	ENSPPYG00000004061	PRDM10	100	95.415	Pongo_abelii
ENSNGAG00000000580	Prdm10	93	86.660	ENSPCAG00000014514	PRDM10	100	84.500	Procavia_capensis
ENSNGAG00000000580	Prdm10	100	81.417	ENSPCOG00000023406	PRDM10	100	81.590	Propithecus_coquereli
ENSNGAG00000000580	Prdm10	100	94.036	ENSPVAG00000012764	PRDM10	100	93.950	Pteropus_vampyrus
ENSNGAG00000000580	Prdm10	100	96.161	ENSRNOG00000007853	Prdm10	100	96.161	Rattus_norvegicus
ENSNGAG00000000580	Prdm10	100	95.771	ENSRBIG00000030924	PRDM10	100	95.069	Rhinopithecus_bieti
ENSNGAG00000000580	Prdm10	99	96.132	ENSRROG00000034334	PRDM10	100	95.069	Rhinopithecus_roxellana
ENSNGAG00000000580	Prdm10	100	95.677	ENSSBOG00000008773	PRDM10	100	94.896	Saimiri_boliviensis_boliviensis
ENSNGAG00000000580	Prdm10	99	87.910	ENSSHAG00000004503	PRDM10	99	86.736	Sarcophilus_harrisii
ENSNGAG00000000580	Prdm10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSNGAG00000000580	Prdm10	99	84.471	ENSSPUG00000001178	PRDM10	97	84.659	Sphenodon_punctatus
ENSNGAG00000000580	Prdm10	100	91.962	ENSSSCG00000015243	PRDM10	100	92.695	Sus_scrofa
ENSNGAG00000000580	Prdm10	99	84.897	ENSTGUG00000000530	PRDM10	100	83.807	Taeniopygia_guttata
ENSNGAG00000000580	Prdm10	94	94.901	ENSTBEG00000007221	PRDM10	94	92.699	Tupaia_belangeri
ENSNGAG00000000580	Prdm10	100	90.657	ENSTTRG00000009189	PRDM10	100	90.052	Tursiops_truncatus
ENSNGAG00000000580	Prdm10	90	95.426	ENSUAMG00000018832	PRDM10	96	94.140	Ursus_americanus
ENSNGAG00000000580	Prdm10	100	94.455	ENSUMAG00000003167	PRDM10	99	94.173	Ursus_maritimus
ENSNGAG00000000580	Prdm10	100	93.891	ENSVVUG00000019878	PRDM10	100	93.669	Vulpes_vulpes
ENSNGAG00000000580	Prdm10	99	72.368	ENSXETG00000032173	PRDM10	100	69.179	Xenopus_tropicalis