EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000000710 (Gene tree)
Gene ID: -
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 23824 bases
Position: chrKL201788.1:303486-327309
Accession: 103738758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000000972	CSD	PF00313.22	4.1e-15	1	1
ENSNGAP00000000976	CSD	PF00313.22	9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000000992	-	720	XM_008838880	ENSNGAP00000000976	239 (aa)	XP_008837102	-
ENSNGAT00000000988	-	1362	-	ENSNGAP00000000972	453 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000000710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000710	Ybx3	91	83.333	ENSG00000060138	YBX3	91	96.429	Homo_sapiens
ENSNGAG00000000710	Ybx3	62	88.028	ENSAMEG00000009393	YBX3	80	88.028	Ailuropoda_melanoleuca
ENSNGAG00000000710	Ybx3	88	89.423	ENSAPLG00000003147	YBX3	75	89.423	Anas_platyrhynchos
ENSNGAG00000000710	Ybx3	90	60.345	ENSANAG00000033366	-	71	75.385	Aotus_nancymaae
ENSNGAG00000000710	Ybx3	91	83.772	ENSANAG00000024492	-	93	85.859	Aotus_nancymaae
ENSNGAG00000000710	Ybx3	100	62.658	ENSBTAG00000009663	YBX3	78	81.081	Bos_taurus
ENSNGAG00000000710	Ybx3	100	66.805	ENSCJAG00000033824	-	72	82.192	Callithrix_jacchus
ENSNGAG00000000710	Ybx3	91	83.333	ENSCJAG00000021660	-	80	85.522	Callithrix_jacchus
ENSNGAG00000000710	Ybx3	88	87.442	ENSCAFG00000013401	YBX3	98	87.442	Canis_familiaris
ENSNGAG00000000710	Ybx3	100	81.855	ENSCAFG00020006412	YBX3	84	83.281	Canis_lupus_dingo
ENSNGAG00000000710	Ybx3	100	62.025	ENSCHIG00000010863	YBX3	82	84.122	Capra_hircus
ENSNGAG00000000710	Ybx3	90	73.451	ENSTSYG00000035821	-	75	71.239	Carlito_syrichta
ENSNGAG00000000710	Ybx3	88	84.722	ENSTSYG00000004204	-	87	87.719	Carlito_syrichta
ENSNGAG00000000710	Ybx3	88	60.915	ENSCAPG00000015039	YBX3	92	83.803	Cavia_aperea
ENSNGAG00000000710	Ybx3	91	83.186	ENSCPOG00000011329	YBX3	86	82.712	Cavia_porcellus
ENSNGAG00000000710	Ybx3	91	82.895	ENSCCAG00000016469	YBX3	79	84.848	Cebus_capucinus
ENSNGAG00000000710	Ybx3	91	83.333	ENSCATG00000034411	YBX3	79	85.859	Cercocebus_atys
ENSNGAG00000000710	Ybx3	88	62.324	ENSCLAG00000016030	YBX3	92	84.859	Chinchilla_lanigera
ENSNGAG00000000710	Ybx3	88	84.404	ENSCSAG00000008744	YBX3	79	85.522	Chlorocebus_sabaeus
ENSNGAG00000000710	Ybx3	89	78.995	ENSCPBG00000014147	YBX3	75	87.273	Chrysemys_picta_bellii
ENSNGAG00000000710	Ybx3	91	82.895	ENSCANG00000036801	YBX3	94	85.522	Colobus_angolensis_palliatus
ENSNGAG00000000710	Ybx3	100	86.585	ENSCGRG00001016148	Ybx3	81	89.456	Cricetulus_griseus_chok1gshd
ENSNGAG00000000710	Ybx3	88	64.460	ENSCGRG00000004563	Ybx3	97	89.547	Cricetulus_griseus_crigri
ENSNGAG00000000710	Ybx3	85	88.660	ENSDORG00000009103	Ybx3	79	86.620	Dipodomys_ordii
ENSNGAG00000000710	Ybx3	88	54.704	ENSETEG00000002557	YBX3	99	76.842	Echinops_telfairi
ENSNGAG00000000710	Ybx3	100	77.016	ENSEASG00005014726	YBX3	85	79.811	Equus_asinus_asinus
ENSNGAG00000000710	Ybx3	100	81.452	ENSECAG00000013777	YBX3	85	83.281	Equus_caballus
ENSNGAG00000000710	Ybx3	88	60.000	ENSEEUG00000010415	YBX3	99	84.561	Erinaceus_europaeus
ENSNGAG00000000710	Ybx3	100	83.534	ENSFCAG00000027748	YBX3	85	85.535	Felis_catus
ENSNGAG00000000710	Ybx3	88	86.111	ENSFALG00000003661	YBX3	78	86.111	Ficedula_albicollis
ENSNGAG00000000710	Ybx3	90	56.794	ENSFDAG00000021192	YBX3	90	80.986	Fukomys_damarensis
ENSNGAG00000000710	Ybx3	88	78.605	ENSGALG00000031890	YBX3	73	78.605	Gallus_gallus
ENSNGAG00000000710	Ybx3	88	74.537	ENSGAGG00000017780	YBX3	73	89.423	Gopherus_agassizii
ENSNGAG00000000710	Ybx3	91	83.333	ENSGGOG00000001352	YBX3	79	85.859	Gorilla_gorilla
ENSNGAG00000000710	Ybx3	95	60.839	ENSHGLG00000014798	-	87	71.672	Heterocephalus_glaber_female
ENSNGAG00000000710	Ybx3	82	73.206	ENSHGLG00000015495	-	87	71.672	Heterocephalus_glaber_female
ENSNGAG00000000710	Ybx3	88	85.185	ENSHGLG00100003589	YBX3	86	85.185	Heterocephalus_glaber_male
ENSNGAG00000000710	Ybx3	88	61.679	ENSSTOG00000002108	-	87	81.338	Ictidomys_tridecemlineatus
ENSNGAG00000000710	Ybx3	91	62.937	ENSSTOG00000032577	-	83	81.419	Ictidomys_tridecemlineatus
ENSNGAG00000000710	Ybx3	91	63.556	ENSJJAG00000014239	Ybx3	96	76.364	Jaculus_jaculus
ENSNGAG00000000710	Ybx3	91	63.176	ENSLAFG00000017247	YBX3	93	85.397	Loxodonta_africana
ENSNGAG00000000710	Ybx3	91	82.895	ENSMFAG00000039369	YBX3	79	85.522	Macaca_fascicularis
ENSNGAG00000000710	Ybx3	91	61.279	ENSMMUG00000022469	YBX3	91	85.522	Macaca_mulatta
ENSNGAG00000000710	Ybx3	91	82.895	ENSMNEG00000045109	YBX3	79	85.522	Macaca_nemestrina
ENSNGAG00000000710	Ybx3	88	87.442	ENSMLEG00000033618	YBX3	80	88.732	Mandrillus_leucophaeus
ENSNGAG00000000710	Ybx3	86	89.320	ENSMGAG00000014224	YBX3	99	78.605	Meleagris_gallopavo
ENSNGAG00000000710	Ybx3	100	85.772	ENSMAUG00000012185	Ybx3	92	88.776	Mesocricetus_auratus
ENSNGAG00000000710	Ybx3	68	86.709	ENSMICG00000038002	-	85	86.751	Microcebus_murinus
ENSNGAG00000000710	Ybx3	100	70.565	ENSMICG00000031459	-	79	73.128	Microcebus_murinus
ENSNGAG00000000710	Ybx3	95	88.841	ENSMOCG00000016291	Ybx3	96	89.456	Microtus_ochrogaster
ENSNGAG00000000710	Ybx3	88	60.284	ENSMODG00000018248	YBX3	90	80.351	Monodelphis_domestica
ENSNGAG00000000710	Ybx3	97	91.743	MGP_CAROLIEiJ_G0028947	Ybx3	81	90.136	Mus_caroli
ENSNGAG00000000710	Ybx3	100	86.992	ENSMUSG00000030189	Ybx3	81	90.136	Mus_musculus
ENSNGAG00000000710	Ybx3	100	86.992	MGP_PahariEiJ_G0022709	Ybx3	81	90.136	Mus_pahari
ENSNGAG00000000710	Ybx3	100	87.398	MGP_SPRETEiJ_G0029994	Ybx3	81	90.476	Mus_spretus
ENSNGAG00000000710	Ybx3	100	66.418	ENSMPUG00000011810	YBX3	85	73.620	Mustela_putorius_furo
ENSNGAG00000000710	Ybx3	58	88.476	ENSMLUG00000007476	YBX3	100	86.245	Myotis_lucifugus
ENSNGAG00000000710	Ybx3	88	83.929	ENSNLEG00000034844	YBX3	84	81.818	Nomascus_leucogenys
ENSNGAG00000000710	Ybx3	100	58.044	ENSODEG00000017957	YBX3	93	79.180	Octodon_degus
ENSNGAG00000000710	Ybx3	88	86.486	ENSOCUG00000001889	YBX3	85	85.235	Oryctolagus_cuniculus
ENSNGAG00000000710	Ybx3	97	85.586	ENSOGAG00000013245	YBX3	85	85.449	Otolemur_garnettii
ENSNGAG00000000710	Ybx3	92	63.176	ENSOARG00000020919	YBX3	99	76.174	Ovis_aries
ENSNGAG00000000710	Ybx3	90	83.628	ENSPPAG00000039068	YBX3	82	85.859	Pan_paniscus
ENSNGAG00000000710	Ybx3	100	83.534	ENSPPRG00000005859	YBX3	85	85.535	Panthera_pardus
ENSNGAG00000000710	Ybx3	62	88.380	ENSPTIG00000005322	YBX3	80	88.380	Panthera_tigris_altaica
ENSNGAG00000000710	Ybx3	91	83.333	ENSPTRG00000004681	YBX3	79	85.859	Pan_troglodytes
ENSNGAG00000000710	Ybx3	91	83.333	ENSPANG00000010280	YBX3	79	85.859	Papio_anubis
ENSNGAG00000000710	Ybx3	88	79.070	ENSPSIG00000009247	YBX3	99	79.070	Pelodiscus_sinensis
ENSNGAG00000000710	Ybx3	100	86.992	ENSPEMG00000010391	-	85	88.444	Peromyscus_maniculatus_bairdii
ENSNGAG00000000710	Ybx3	100	86.992	ENSPEMG00000012132	-	92	89.796	Peromyscus_maniculatus_bairdii
ENSNGAG00000000710	Ybx3	57	82.239	ENSPCIG00000029949	YBX3	100	82.239	Phascolarctos_cinereus
ENSNGAG00000000710	Ybx3	91	61.279	ENSPPYG00000004279	YBX3	80	85.522	Pongo_abelii
ENSNGAG00000000710	Ybx3	58	54.378	ENSPCAG00000001397	YBX3	80	84.120	Procavia_capensis
ENSNGAG00000000710	Ybx3	100	51.104	ENSPVAG00000006740	YBX3	62	86.695	Pteropus_vampyrus
ENSNGAG00000000710	Ybx3	88	90.610	ENSRNOG00000005480	Ybx3	81	90.136	Rattus_norvegicus
ENSNGAG00000000710	Ybx3	90	83.628	ENSRBIG00000039208	YBX3	80	85.522	Rhinopithecus_bieti
ENSNGAG00000000710	Ybx3	91	83.333	ENSRROG00000029638	YBX3	80	85.522	Rhinopithecus_roxellana
ENSNGAG00000000710	Ybx3	94	83.983	ENSSBOG00000030573	YBX3	82	88.380	Saimiri_boliviensis_boliviensis
ENSNGAG00000000710	Ybx3	85	87.629	ENSSHAG00000003262	YBX3	97	77.663	Sarcophilus_harrisii
ENSNGAG00000000710	Ybx3	56	80.292	ENSSPUG00000009911	-	61	80.153	Sphenodon_punctatus
ENSNGAG00000000710	Ybx3	88	85.185	ENSSSCG00000000633	YBX3	77	85.859	Sus_scrofa
ENSNGAG00000000710	Ybx3	87	89.423	ENSTGUG00000012047	YBX3	99	63.509	Taeniopygia_guttata
ENSNGAG00000000710	Ybx3	88	62.807	ENSTBEG00000012570	YBX3	78	88.070	Tupaia_belangeri
ENSNGAG00000000710	Ybx3	80	59.470	ENSTTRG00000008045	YBX3	100	80.827	Tursiops_truncatus
ENSNGAG00000000710	Ybx3	60	85.401	ENSUAMG00000016662	YBX3	98	85.401	Ursus_americanus
ENSNGAG00000000710	Ybx3	62	87.676	ENSUMAG00000016118	YBX3	93	87.676	Ursus_maritimus
ENSNGAG00000000710	Ybx3	71	84.127	ENSVPAG00000000876	YBX3	99	62.807	Vicugna_pacos
ENSNGAG00000000710	Ybx3	55	91.235	ENSVVUG00000004956	YBX3	93	91.235	Vulpes_vulpes
ENSNGAG00000000710	Ybx3	88	67.130	ENSXETG00000016239	ybx3	86	67.130	Xenopus_tropicalis