EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000000712 (Gene tree)
Gene ID
103735276
Gene Symbol
Puf60
Alias
2410104I19Rik|2810454F19Rik
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Plus strand
Length
11964 bases
Position
chrKL201069.1:1102813-1114776
Accession
103735276
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000000952RRM_1PF00076.228.1e-4412
ENSNGAP00000000952RRM_1PF00076.228.1e-4422
ENSNGAP00000000937RRM_1PF00076.228.6e-4412
ENSNGAP00000000937RRM_1PF00076.228.6e-4422
ENSNGAP00000000946RRM_1PF00076.229.5e-4412
ENSNGAP00000000946RRM_1PF00076.229.5e-4422
ENSNGAP00000000934RRM_1PF00076.229.8e-4412
ENSNGAP00000000934RRM_1PF00076.229.8e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000000968-2045XM_017798538ENSNGAP00000000952516 (aa)XP_017654027UPI000819E776
ENSNGAT00000000953-1852XM_008834494ENSNGAP00000000937547 (aa)XP_008832716UPI0004ED4883
ENSNGAT00000000950-1903XM_008834491ENSNGAP00000000934564 (aa)XP_008832713UPI0004ED325C
ENSNGAT00000000962-1641-ENSNGAP00000000946546 (aa)--
Gene Model
Click here to download ENSNGAG00000000712's gene model file
Pathways
Pathway IDPathway NameSource
ngi03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000712's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000000712Puf605235.294ENSNGAG00000020369U2af26037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000000712Puf6010099.031ENSG00000179950PUF6010099.031Homo_sapiens
ENSNGAG00000000712Puf6010086.756ENSAPOG00000001713puf60b9985.985Acanthochromis_polyacanthus
ENSNGAG00000000712Puf6010097.287ENSAMEG00000006406PUF609995.915Ailuropoda_melanoleuca
ENSNGAG00000000712Puf6010085.797ENSACIG00000021705puf60b10085.797Amphilophus_citrinellus
ENSNGAG00000000712Puf6010077.543ENSACIG00000003263-9977.969Amphilophus_citrinellus
ENSNGAG00000000712Puf6010082.115ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSNGAG00000000712Puf6010086.756ENSAOCG00000005395puf60b10086.756Amphiprion_ocellaris
ENSNGAG00000000712Puf6010081.190ENSAPEG00000011923puf60b9983.170Amphiprion_percula
ENSNGAG00000000712Puf6010072.745ENSAPEG00000001836-9976.667Amphiprion_percula
ENSNGAG00000000712Puf6010081.888ENSATEG00000006303-9981.714Anabas_testudineus
ENSNGAG00000000712Puf6010086.564ENSATEG00000001730puf60b9985.795Anabas_testudineus
ENSNGAG00000000712Puf6010098.450ENSAPLG00000010150PUF6010098.276Anas_platyrhynchos
ENSNGAG00000000712Puf6010096.917ENSACAG00000001645PUF609796.015Anolis_carolinensis
ENSNGAG00000000712Puf6010099.031ENSANAG00000018626PUF6010099.031Aotus_nancymaae
ENSNGAG00000000712Puf6010085.797ENSACLG00000004462puf60b10085.797Astatotilapia_calliptera
ENSNGAG00000000712Puf6010076.636ENSAMXG00000041030puf60b10074.906Astyanax_mexicanus
ENSNGAG00000000712Puf6010084.746ENSAMXG00000036570puf60a9784.736Astyanax_mexicanus
ENSNGAG00000000712Puf6010099.225ENSBTAG00000037493PUF6010098.936Bos_taurus
ENSNGAG00000000712Puf608150.667WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSNGAG00000000712Puf6010099.291ENSCJAG00000021485PUF6010099.291Callithrix_jacchus
ENSNGAG00000000712Puf6010099.031ENSCAFG00000001400PUF6010098.720Canis_familiaris
ENSNGAG00000000712Puf6010099.419ENSCAFG00020018754PUF6010098.759Canis_lupus_dingo
ENSNGAG00000000712Puf6010099.225ENSCHIG00000001618PUF609298.201Capra_hircus
ENSNGAG00000000712Puf6010099.419ENSTSYG00000011912PUF6010099.419Carlito_syrichta
ENSNGAG00000000712Puf6010093.654ENSCPOG00000014613PUF609992.883Cavia_porcellus
ENSNGAG00000000712Puf6010099.031ENSCCAG00000007744PUF6010098.936Cebus_capucinus
ENSNGAG00000000712Puf6010099.031ENSCATG00000035405PUF6010098.227Cercocebus_atys
ENSNGAG00000000712Puf6010099.645ENSCLAG00000009154PUF6010099.645Chinchilla_lanigera
ENSNGAG00000000712Puf6010099.031ENSCSAG00000008878PUF6010099.031Chlorocebus_sabaeus
ENSNGAG00000000712Puf6010098.450ENSCPBG00000005595PUF609898.276Chrysemys_picta_bellii
ENSNGAG00000000712Puf609849.046ENSCING00000008436-9848.956Ciona_intestinalis
ENSNGAG00000000712Puf606459.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSNGAG00000000712Puf609755.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSNGAG00000000712Puf609749.605ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSNGAG00000000712Puf608199.041ENSCANG00000041843PUF6010099.041Colobus_angolensis_palliatus
ENSNGAG00000000712Puf6010099.806ENSCGRG00001017442Puf6010099.645Cricetulus_griseus_chok1gshd
ENSNGAG00000000712Puf6010099.806ENSCGRG00000003717Puf609998.561Cricetulus_griseus_crigri
ENSNGAG00000000712Puf6010072.658ENSCSEG00000014845-8977.470Cynoglossus_semilaevis
ENSNGAG00000000712Puf6010085.797ENSCSEG00000019887puf60b9385.009Cynoglossus_semilaevis
ENSNGAG00000000712Puf609180.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSNGAG00000000712Puf6010084.837ENSCVAG00000009386puf60b10085.988Cyprinodon_variegatus
ENSNGAG00000000712Puf6010079.135ENSDARG00000001241puf60b9996.825Danio_rerio
ENSNGAG00000000712Puf6010086.742ENSDARG00000032175puf60a9993.617Danio_rerio
ENSNGAG00000000712Puf609983.953ENSDNOG00000043278PUF609881.607Dasypus_novemcinctus
ENSNGAG00000000712Puf6010099.806ENSDORG00000004585Puf6010098.921Dipodomys_ordii
ENSNGAG00000000712Puf609749.656FBgn0028577hfp9951.009Drosophila_melanogaster
ENSNGAG00000000712Puf6010061.017ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSNGAG00000000712Puf609870.040ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSNGAG00000000712Puf6010099.419ENSEASG00005009695PUF6010098.759Equus_asinus_asinus
ENSNGAG00000000712Puf6010099.419ENSECAG00000024681PUF609998.921Equus_caballus
ENSNGAG00000000712Puf6010084.423ENSELUG00000006507puf60b9980.586Esox_lucius
ENSNGAG00000000712Puf6010085.878ENSELUG00000018443-9985.799Esox_lucius
ENSNGAG00000000712Puf6010099.291ENSFCAG00000001045PUF6010099.291Felis_catus
ENSNGAG00000000712Puf6010085.659ENSFALG00000001136PUF609886.782Ficedula_albicollis
ENSNGAG00000000712Puf6010099.419ENSFDAG00000017177PUF6010099.291Fukomys_damarensis
ENSNGAG00000000712Puf609679.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSNGAG00000000712Puf6010085.221ENSFHEG00000020046puf60b10086.372Fundulus_heteroclitus
ENSNGAG00000000712Puf6010072.433ENSGMOG00000006392puf60b10071.429Gadus_morhua
ENSNGAG00000000712Puf606797.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSNGAG00000000712Puf6010084.645ENSGAFG00000021040puf60b10085.797Gambusia_affinis
ENSNGAG00000000712Puf6010079.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSNGAG00000000712Puf6010070.986ENSGACG00000001484-10069.615Gasterosteus_aculeatus
ENSNGAG00000000712Puf6010074.379ENSGACG00000004717puf60b9873.055Gasterosteus_aculeatus
ENSNGAG00000000712Puf6010098.450ENSGAGG00000013289PUF609298.276Gopherus_agassizii
ENSNGAG00000000712Puf6010099.031ENSGGOG00000004646PUF6010098.227Gorilla_gorilla
ENSNGAG00000000712Puf6010085.797ENSHBUG00000015118puf60b10085.797Haplochromis_burtoni
ENSNGAG00000000712Puf6010082.726ENSHBUG00000009634-10082.937Haplochromis_burtoni
ENSNGAG00000000712Puf6010099.419ENSHGLG00000006111PUF6010099.291Heterocephalus_glaber_female
ENSNGAG00000000712Puf6010099.419ENSHGLG00100012362PUF6010099.291Heterocephalus_glaber_male
ENSNGAG00000000712Puf609866.798ENSHCOG00000000378-9965.226Hippocampus_comes
ENSNGAG00000000712Puf6010082.810ENSHCOG00000015541puf60b10082.103Hippocampus_comes
ENSNGAG00000000712Puf6010078.947ENSIPUG00000004660puf60b9978.719Ictalurus_punctatus
ENSNGAG00000000712Puf6010082.231ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSNGAG00000000712Puf6010099.612ENSSTOG00000025037PUF6010098.582Ictidomys_tridecemlineatus
ENSNGAG00000000712Puf60100100.000ENSJJAG00000001076Puf6010099.468Jaculus_jaculus
ENSNGAG00000000712Puf6010078.639ENSKMAG00000010106-10076.119Kryptolebias_marmoratus
ENSNGAG00000000712Puf6010085.221ENSKMAG00000016745puf60b10086.372Kryptolebias_marmoratus
ENSNGAG00000000712Puf6010084.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSNGAG00000000712Puf607090.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSNGAG00000000712Puf6010091.522ENSLOCG00000010106puf60b9989.734Lepisosteus_oculatus
ENSNGAG00000000712Puf6010098.256ENSLAFG00000022929PUF6010095.382Loxodonta_africana
ENSNGAG00000000712Puf6010099.031ENSMFAG00000043373PUF6010098.227Macaca_fascicularis
ENSNGAG00000000712Puf6010099.031ENSMMUG00000013558PUF6010098.404Macaca_mulatta
ENSNGAG00000000712Puf6010099.031ENSMNEG00000031099PUF6010098.227Macaca_nemestrina
ENSNGAG00000000712Puf6010099.031ENSMLEG00000040009PUF6010099.031Mandrillus_leucophaeus
ENSNGAG00000000712Puf6010083.685ENSMAMG00000019476-9982.353Mastacembelus_armatus
ENSNGAG00000000712Puf6010086.372ENSMAMG00000010394puf60b10084.112Mastacembelus_armatus
ENSNGAG00000000712Puf6010085.797ENSMZEG00005018515puf60b10085.797Maylandia_zebra
ENSNGAG00000000712Puf6010082.917ENSMZEG00005019425-9982.163Maylandia_zebra
ENSNGAG00000000712Puf6010098.450ENSMGAG00000013070PUF609898.276Meleagris_gallopavo
ENSNGAG00000000712Puf609680.561ENSMAUG00000018549-10076.130Mesocricetus_auratus
ENSNGAG00000000712Puf607299.755ENSMAUG00000014267-10099.755Mesocricetus_auratus
ENSNGAG00000000712Puf6010099.419ENSMICG00000012226PUF609999.425Microcebus_murinus
ENSNGAG00000000712Puf60100100.000ENSMOCG00000018780Puf6010099.823Microtus_ochrogaster
ENSNGAG00000000712Puf6010073.501ENSMMOG00000018059-9976.712Mola_mola
ENSNGAG00000000712Puf6010086.180ENSMMOG00000004217puf60b10086.180Mola_mola
ENSNGAG00000000712Puf6010099.031ENSMODG00000009161PUF6010096.892Monodelphis_domestica
ENSNGAG00000000712Puf6010078.887ENSMALG00000006797puf60b9978.220Monopterus_albus
ENSNGAG00000000712Puf6010081.574ENSMALG00000000200-9979.434Monopterus_albus
ENSNGAG00000000712Puf6010099.806MGP_CAROLIEiJ_G0019910Puf6010099.645Mus_caroli
ENSNGAG00000000712Puf6010099.806ENSMUSG00000002524Puf6010099.645Mus_musculus
ENSNGAG00000000712Puf6010099.806MGP_PahariEiJ_G0019920Puf6010099.645Mus_pahari
ENSNGAG00000000712Puf6010099.806MGP_SPRETEiJ_G0020812Puf6010099.645Mus_spretus
ENSNGAG00000000712Puf6010099.225ENSMPUG00000008137PUF609798.022Mustela_putorius_furo
ENSNGAG00000000712Puf6010099.031ENSMLUG00000000238-9898.022Myotis_lucifugus
ENSNGAG00000000712Puf6010092.442ENSMLUG00000013032-9895.644Myotis_lucifugus
ENSNGAG00000000712Puf608383.032ENSNBRG00000013047puf60b9784.471Neolamprologus_brichardi
ENSNGAG00000000712Puf6010083.109ENSNBRG00000017223-9982.319Neolamprologus_brichardi
ENSNGAG00000000712Puf6010099.031ENSNLEG00000002156PUF6010098.227Nomascus_leucogenys
ENSNGAG00000000712Puf607598.976ENSOPRG00000002147PUF607598.976Ochotona_princeps
ENSNGAG00000000712Puf6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSNGAG00000000712Puf609874.359ENSODEG00000015513-9673.256Octodon_degus
ENSNGAG00000000712Puf6010083.109ENSONIG00000014030-9982.386Oreochromis_niloticus
ENSNGAG00000000712Puf6010085.797ENSONIG00000006247puf60b9985.038Oreochromis_niloticus
ENSNGAG00000000712Puf609778.218ENSOANG00000006962PUF609978.320Ornithorhynchus_anatinus
ENSNGAG00000000712Puf6010085.605ENSORLG00000012279puf60b10085.221Oryzias_latipes
ENSNGAG00000000712Puf609978.977ENSORLG00000028655-9979.087Oryzias_latipes
ENSNGAG00000000712Puf609979.580ENSORLG00020018144-9878.977Oryzias_latipes_hni
ENSNGAG00000000712Puf6010085.605ENSORLG00020007333puf6010085.221Oryzias_latipes_hni
ENSNGAG00000000712Puf609979.580ENSORLG00015016833-9879.238Oryzias_latipes_hsok
ENSNGAG00000000712Puf6010084.704ENSORLG00015007718puf60b10085.086Oryzias_latipes_hsok
ENSNGAG00000000712Puf609980.614ENSOMEG00000022185-9879.886Oryzias_melastigma
ENSNGAG00000000712Puf6010083.271ENSOMEG00000001643puf60b10082.341Oryzias_melastigma
ENSNGAG00000000712Puf6010099.612ENSOGAG00000006259PUF609997.691Otolemur_garnettii
ENSNGAG00000000712Puf6010096.705ENSOARG00000016235PUF609996.750Ovis_aries
ENSNGAG00000000712Puf6010099.031ENSPPAG00000029933PUF6010098.227Pan_paniscus
ENSNGAG00000000712Puf6010099.291ENSPPRG00000003257PUF6010099.291Panthera_pardus
ENSNGAG00000000712Puf6010096.899ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSNGAG00000000712Puf6010098.837ENSPTRG00000043963-9998.022Pan_troglodytes
ENSNGAG00000000712Puf6010098.837ENSPTRG00000020670PUF6010098.050Pan_troglodytes
ENSNGAG00000000712Puf6010099.031ENSPANG00000021936PUF6010098.227Papio_anubis
ENSNGAG00000000712Puf6010088.269ENSPKIG00000012204puf60b10088.269Paramormyrops_kingsleyae
ENSNGAG00000000712Puf6010086.807ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSNGAG00000000712Puf6010098.256ENSPSIG00000004679PUF609998.088Pelodiscus_sinensis
ENSNGAG00000000712Puf6010084.733ENSPMGG00000013444puf60b9984.733Periophthalmus_magnuspinnatus
ENSNGAG00000000712Puf60100100.000ENSPEMG00000008820Puf6010099.823Peromyscus_maniculatus_bairdii
ENSNGAG00000000712Puf6010099.612ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSNGAG00000000712Puf6010080.732ENSPFOG00000011118-9781.081Poecilia_formosa
ENSNGAG00000000712Puf6010085.221ENSPFOG00000019217puf60b10085.019Poecilia_formosa
ENSNGAG00000000712Puf6010085.221ENSPLAG00000010754puf60b10086.372Poecilia_latipinna
ENSNGAG00000000712Puf6010080.732ENSPLAG00000017025-9080.695Poecilia_latipinna
ENSNGAG00000000712Puf6010085.221ENSPMEG00000000838puf60b10086.372Poecilia_mexicana
ENSNGAG00000000712Puf6010080.732ENSPMEG00000009767-9081.081Poecilia_mexicana
ENSNGAG00000000712Puf6010082.430ENSPREG00000005440puf60b10084.127Poecilia_reticulata
ENSNGAG00000000712Puf608197.362ENSPPYG00000018951-9597.362Pongo_abelii
ENSNGAG00000000712Puf608199.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSNGAG00000000712Puf6010099.225ENSPCOG00000027981PUF6010098.759Propithecus_coquereli
ENSNGAG00000000712Puf6010099.617ENSPVAG00000016167PUF608199.617Pteropus_vampyrus
ENSNGAG00000000712Puf6010082.917ENSPNYG00000004273-9982.163Pundamilia_nyererei
ENSNGAG00000000712Puf6010085.797ENSPNYG00000002556puf60b10085.797Pundamilia_nyererei
ENSNGAG00000000712Puf6010078.119ENSPNAG00000019415puf60b9176.893Pygocentrus_nattereri
ENSNGAG00000000712Puf6010083.174ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSNGAG00000000712Puf6010099.806ENSRNOG00000009960Puf6010099.634Rattus_norvegicus
ENSNGAG00000000712Puf6010099.031ENSRBIG00000035274PUF6010098.227Rhinopithecus_bieti
ENSNGAG00000000712Puf6010099.031ENSRROG00000029360PUF6010098.227Rhinopithecus_roxellana
ENSNGAG00000000712Puf6010097.868ENSSBOG00000027089PUF609897.893Saimiri_boliviensis_boliviensis
ENSNGAG00000000712Puf609098.707ENSSHAG00000006668PUF609695.898Sarcophilus_harrisii
ENSNGAG00000000712Puf6010082.510ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSNGAG00000000712Puf6010082.234ENSSFOG00015019371puf60a9887.525Scleropages_formosus
ENSNGAG00000000712Puf607394.585ENSSMAG00000016381puf60b7294.585Scophthalmus_maximus
ENSNGAG00000000712Puf609981.274ENSSDUG00000007048-9880.725Seriola_dumerili
ENSNGAG00000000712Puf6010084.774ENSSDUG00000009935puf60b9984.774Seriola_dumerili
ENSNGAG00000000712Puf6010086.564ENSSLDG00000024011puf60b10084.299Seriola_lalandi_dorsalis
ENSNGAG00000000712Puf6010080.608ENSSLDG00000007366-9981.025Seriola_lalandi_dorsalis
ENSNGAG00000000712Puf606784.682ENSSPUG00000013518PUF609485.163Sphenodon_punctatus
ENSNGAG00000000712Puf6010082.252ENSSPAG00000020285-10082.824Stegastes_partitus
ENSNGAG00000000712Puf6010083.925ENSSPAG00000012144puf60b10084.486Stegastes_partitus
ENSNGAG00000000712Puf6010099.225ENSSSCG00000038800PUF609898.812Sus_scrofa
ENSNGAG00000000712Puf6010095.155ENSTGUG00000012797-10095.019Taeniopygia_guttata
ENSNGAG00000000712Puf6010085.221ENSTRUG00000005420puf60b10082.991Takifugu_rubripes
ENSNGAG00000000712Puf6010077.907ENSTRUG00000008843-10080.561Takifugu_rubripes
ENSNGAG00000000712Puf6010078.876ENSTNIG00000003069-10078.203Tetraodon_nigroviridis
ENSNGAG00000000712Puf6010085.221ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSNGAG00000000712Puf606296.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSNGAG00000000712Puf607781.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSNGAG00000000712Puf6010098.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSNGAG00000000712Puf6010099.419ENSUAMG00000024917PUF6010098.404Ursus_americanus
ENSNGAG00000000712Puf6010094.186ENSUMAG00000000272PUF609993.165Ursus_maritimus
ENSNGAG00000000712Puf6010099.419ENSVVUG00000022527PUF6010099.419Vulpes_vulpes
ENSNGAG00000000712Puf6010094.767ENSXETG00000012469puf609994.643Xenopus_tropicalis
ENSNGAG00000000712Puf6010081.958ENSXCOG00000012355puf60b10085.913Xiphophorus_couchianus
ENSNGAG00000000712Puf6010085.221ENSXMAG00000001862puf60b10086.372Xiphophorus_maculatus
ENSNGAG00000000712Puf6010078.378ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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