EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000000810 (Gene tree)
Gene ID: 103743363
Gene Symbol: Smarcad1
Alias: D6Pas1|Etl1
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 95801 bases
Position: chrKL202846.1:2570942-2666742
Accession: 103743363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000001113	ResIII	PF04851.15	1.7e-09	1	1
ENSNGAP00000001109	ResIII	PF04851.15	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000001140	-	219	-	ENSNGAP00000001121	73 (aa)	-	-
ENSNGAT00000001131	-	3045	-	ENSNGAP00000001113	1014 (aa)	-	-
ENSNGAT00000001127	-	4973	XM_008844621	ENSNGAP00000001109	1023 (aa)	XP_008842843	UPI0004ED5EE2

Gene Model

Click here to download ENSNGAG00000000810's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000000810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000000810	Smarcad1	51	35.943	ENSNGAG00000014049	Hells	64	35.943
ENSNGAG00000000810	Smarcad1	50	31.507	ENSNGAG00000000908	Chd1l	50	31.507
ENSNGAG00000000810	Smarcad1	51	34.944	ENSNGAG00000019957	-	55	34.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000000810	Smarcad1	100	94.250	ENSG00000163104	SMARCAD1	100	97.987	Homo_sapiens
ENSNGAG00000000810	Smarcad1	100	62.697	ENSAPOG00000011446	smarcad1a	97	60.739	Acanthochromis_polyacanthus
ENSNGAG00000000810	Smarcad1	100	93.580	ENSAMEG00000005844	SMARCAD1	100	93.580	Ailuropoda_melanoleuca
ENSNGAG00000000810	Smarcad1	68	68.030	ENSACIG00000018326	smarcad1a	100	68.030	Amphilophus_citrinellus
ENSNGAG00000000810	Smarcad1	100	62.410	ENSAOCG00000019762	smarcad1a	98	62.410	Amphiprion_ocellaris
ENSNGAG00000000810	Smarcad1	100	62.554	ENSAPEG00000003889	smarcad1a	98	60.602	Amphiprion_percula
ENSNGAG00000000810	Smarcad1	87	62.360	ENSATEG00000015608	smarcad1a	93	62.360	Anabas_testudineus
ENSNGAG00000000810	Smarcad1	94	71.311	ENSAPLG00000004630	SMARCAD1	100	71.414	Anas_platyrhynchos
ENSNGAG00000000810	Smarcad1	100	69.709	ENSACAG00000013554	SMARCAD1	100	69.903	Anolis_carolinensis
ENSNGAG00000000810	Smarcad1	100	93.872	ENSANAG00000020488	SMARCAD1	99	95.127	Aotus_nancymaae
ENSNGAG00000000810	Smarcad1	63	65.991	ENSACLG00000017063	smarcad1a	100	49.631	Astatotilapia_calliptera
ENSNGAG00000000810	Smarcad1	78	59.063	ENSAMXG00000019130	smarcad1b	85	59.649	Astyanax_mexicanus
ENSNGAG00000000810	Smarcad1	70	60.845	ENSAMXG00000015470	smarcad1a	98	60.845	Astyanax_mexicanus
ENSNGAG00000000810	Smarcad1	100	92.809	ENSBTAG00000017061	SMARCAD1	100	92.809	Bos_taurus
ENSNGAG00000000810	Smarcad1	62	42.254	WBGene00010845	M03C11.8	72	39.863	Caenorhabditis_elegans
ENSNGAG00000000810	Smarcad1	100	94.439	ENSCJAG00000006778	SMARCAD1	100	94.439	Callithrix_jacchus
ENSNGAG00000000810	Smarcad1	100	93.191	ENSCAFG00000010026	SMARCAD1	100	93.191	Canis_familiaris
ENSNGAG00000000810	Smarcad1	87	95.578	ENSCAFG00020003994	SMARCAD1	99	95.578	Canis_lupus_dingo
ENSNGAG00000000810	Smarcad1	100	92.899	ENSCHIG00000012905	SMARCAD1	100	92.899	Capra_hircus
ENSNGAG00000000810	Smarcad1	100	94.352	ENSTSYG00000002706	SMARCAD1	100	94.352	Carlito_syrichta
ENSNGAG00000000810	Smarcad1	91	77.922	ENSCAPG00000016744	SMARCAD1	96	78.696	Cavia_aperea
ENSNGAG00000000810	Smarcad1	100	92.829	ENSCPOG00000011398	SMARCAD1	100	92.539	Cavia_porcellus
ENSNGAG00000000810	Smarcad1	100	93.957	ENSCCAG00000022264	SMARCAD1	100	97.987	Cebus_capucinus
ENSNGAG00000000810	Smarcad1	100	94.250	ENSCATG00000035663	SMARCAD1	100	95.613	Cercocebus_atys
ENSNGAG00000000810	Smarcad1	83	96.548	ENSCSAG00000004186	SMARCAD1	100	96.548	Chlorocebus_sabaeus
ENSNGAG00000000810	Smarcad1	100	72.474	ENSCPBG00000013203	SMARCAD1	100	72.666	Chrysemys_picta_bellii
ENSNGAG00000000810	Smarcad1	65	49.249	ENSCING00000001688	-	99	49.249	Ciona_intestinalis
ENSNGAG00000000810	Smarcad1	100	94.347	ENSCANG00000003556	SMARCAD1	100	97.987	Colobus_angolensis_palliatus
ENSNGAG00000000810	Smarcad1	100	93.366	ENSCGRG00001015056	Smarcad1	100	93.366	Cricetulus_griseus_chok1gshd
ENSNGAG00000000810	Smarcad1	100	93.366	ENSCGRG00000014087	Smarcad1	100	93.366	Cricetulus_griseus_crigri
ENSNGAG00000000810	Smarcad1	99	63.244	ENSCSEG00000017903	smarcad1a	100	47.373	Cynoglossus_semilaevis
ENSNGAG00000000810	Smarcad1	94	62.202	ENSCSEG00000014419	-	100	46.691	Cynoglossus_semilaevis
ENSNGAG00000000810	Smarcad1	79	57.688	ENSDARG00000073721	smarcad1b	82	58.913	Danio_rerio
ENSNGAG00000000810	Smarcad1	100	49.007	ENSDARG00000014041	smarcad1a	100	50.238	Danio_rerio
ENSNGAG00000000810	Smarcad1	100	93.080	ENSDNOG00000000806	-	100	93.080	Dasypus_novemcinctus
ENSNGAG00000000810	Smarcad1	100	92.121	ENSDORG00000012331	Smarcad1	100	91.813	Dipodomys_ordii
ENSNGAG00000000810	Smarcad1	63	45.385	FBgn0032157	Etl1	92	39.448	Drosophila_melanogaster
ENSNGAG00000000810	Smarcad1	63	45.092	ENSEBUG00000003969	smarcad1a	96	45.705	Eptatretus_burgeri
ENSNGAG00000000810	Smarcad1	100	93.677	ENSEASG00005012382	SMARCAD1	100	93.677	Equus_asinus_asinus
ENSNGAG00000000810	Smarcad1	100	93.677	ENSECAG00000011562	SMARCAD1	100	93.677	Equus_caballus
ENSNGAG00000000810	Smarcad1	79	57.021	ENSELUG00000019154	smarcad1b	79	58.568	Esox_lucius
ENSNGAG00000000810	Smarcad1	100	51.493	ENSELUG00000018535	smarcad1a	100	50.982	Esox_lucius
ENSNGAG00000000810	Smarcad1	100	93.281	ENSFCAG00000003958	SMARCAD1	100	97.651	Felis_catus
ENSNGAG00000000810	Smarcad1	100	66.410	ENSFALG00000006089	SMARCAD1	100	66.474	Ficedula_albicollis
ENSNGAG00000000810	Smarcad1	100	93.177	ENSFDAG00000017027	SMARCAD1	100	93.177	Fukomys_damarensis
ENSNGAG00000000810	Smarcad1	96	64.723	ENSFHEG00000012778	smarcad1a	87	63.824	Fundulus_heteroclitus
ENSNGAG00000000810	Smarcad1	85	57.028	ENSGMOG00000018995	smarcad1a	97	56.651	Gadus_morhua
ENSNGAG00000000810	Smarcad1	78	72.819	ENSGALG00000037339	SMARCAD1	94	73.436	Gallus_gallus
ENSNGAG00000000810	Smarcad1	62	66.193	ENSGAFG00000013498	smarcad1a	60	66.193	Gambusia_affinis
ENSNGAG00000000810	Smarcad1	86	57.370	ENSGACG00000007327	smarcad1a	99	57.256	Gasterosteus_aculeatus
ENSNGAG00000000810	Smarcad1	100	72.876	ENSGAGG00000008582	SMARCAD1	100	73.069	Gopherus_agassizii
ENSNGAG00000000810	Smarcad1	100	94.347	ENSGGOG00000023001	SMARCAD1	100	94.347	Gorilla_gorilla
ENSNGAG00000000810	Smarcad1	63	65.835	ENSHBUG00000011042	smarcad1a	60	65.835	Haplochromis_burtoni
ENSNGAG00000000810	Smarcad1	100	93.501	ENSHGLG00000005070	SMARCAD1	100	93.294	Heterocephalus_glaber_female
ENSNGAG00000000810	Smarcad1	100	93.501	ENSHGLG00100006812	SMARCAD1	100	93.294	Heterocephalus_glaber_male
ENSNGAG00000000810	Smarcad1	99	62.830	ENSHCOG00000007848	smarcad1a	98	58.333	Hippocampus_comes
ENSNGAG00000000810	Smarcad1	82	57.041	ENSIPUG00000022817	smarcad1b	84	59.898	Ictalurus_punctatus
ENSNGAG00000000810	Smarcad1	97	59.914	ENSIPUG00000000242	smarcad1a	96	60.057	Ictalurus_punctatus
ENSNGAG00000000810	Smarcad1	100	94.352	ENSSTOG00000001227	SMARCAD1	100	94.352	Ictidomys_tridecemlineatus
ENSNGAG00000000810	Smarcad1	100	93.957	ENSJJAG00000022342	Smarcad1	100	93.957	Jaculus_jaculus
ENSNGAG00000000810	Smarcad1	93	63.514	ENSKMAG00000021351	smarcad1a	90	61.190	Kryptolebias_marmoratus
ENSNGAG00000000810	Smarcad1	94	64.925	ENSLBEG00000008088	smarcad1a	90	64.925	Labrus_bergylta
ENSNGAG00000000810	Smarcad1	100	54.191	ENSLOCG00000012909	smarcad1a	100	55.588	Lepisosteus_oculatus
ENSNGAG00000000810	Smarcad1	100	91.715	ENSLAFG00000000040	SMARCAD1	100	91.715	Loxodonta_africana
ENSNGAG00000000810	Smarcad1	100	93.957	ENSMFAG00000042606	SMARCAD1	99	95.805	Macaca_fascicularis
ENSNGAG00000000810	Smarcad1	87	95.805	ENSMMUG00000022242	SMARCAD1	99	95.805	Macaca_mulatta
ENSNGAG00000000810	Smarcad1	100	93.860	ENSMNEG00000038117	SMARCAD1	100	97.819	Macaca_nemestrina
ENSNGAG00000000810	Smarcad1	100	94.347	ENSMLEG00000038333	SMARCAD1	100	97.987	Mandrillus_leucophaeus
ENSNGAG00000000810	Smarcad1	63	65.991	ENSMZEG00005005203	smarcad1a	100	49.631	Maylandia_zebra
ENSNGAG00000000810	Smarcad1	94	63.646	ENSMGAG00000005577	SMARCAD1	100	63.646	Meleagris_gallopavo
ENSNGAG00000000810	Smarcad1	100	93.171	ENSMAUG00000008417	Smarcad1	100	93.171	Mesocricetus_auratus
ENSNGAG00000000810	Smarcad1	100	93.197	ENSMICG00000009746	SMARCAD1	100	93.197	Microcebus_murinus
ENSNGAG00000000810	Smarcad1	100	92.780	ENSMOCG00000017142	Smarcad1	100	92.780	Microtus_ochrogaster
ENSNGAG00000000810	Smarcad1	78	58.786	ENSMMOG00000000275	smarcad1a	92	64.435	Mola_mola
ENSNGAG00000000810	Smarcad1	100	80.388	ENSMODG00000019268	SMARCAD1	100	80.388	Monodelphis_domestica
ENSNGAG00000000810	Smarcad1	95	94.215	MGP_CAROLIEiJ_G0028458	-	77	94.215	Mus_caroli
ENSNGAG00000000810	Smarcad1	100	91.910	ENSMUSG00000029920	Smarcad1	100	91.910	Mus_musculus
ENSNGAG00000000810	Smarcad1	100	92.203	MGP_PahariEiJ_G0022198	Smarcad1	100	92.203	Mus_pahari
ENSNGAG00000000810	Smarcad1	100	91.910	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.910	Mus_spretus
ENSNGAG00000000810	Smarcad1	100	93.580	ENSMPUG00000002111	SMARCAD1	100	93.580	Mustela_putorius_furo
ENSNGAG00000000810	Smarcad1	100	89.932	ENSMLUG00000000425	SMARCAD1	100	90.370	Myotis_lucifugus
ENSNGAG00000000810	Smarcad1	62	66.186	ENSNBRG00000012749	smarcad1a	85	60.674	Neolamprologus_brichardi
ENSNGAG00000000810	Smarcad1	100	94.347	ENSNLEG00000014225	SMARCAD1	100	97.987	Nomascus_leucogenys
ENSNGAG00000000810	Smarcad1	100	93.404	ENSODEG00000004334	SMARCAD1	100	93.392	Octodon_degus
ENSNGAG00000000810	Smarcad1	64	65.432	ENSONIG00000015059	smarcad1a	100	52.348	Oreochromis_niloticus
ENSNGAG00000000810	Smarcad1	81	83.333	ENSOANG00000013764	SMARCAD1	100	83.333	Ornithorhynchus_anatinus
ENSNGAG00000000810	Smarcad1	100	93.756	ENSOCUG00000017283	SMARCAD1	100	93.756	Oryctolagus_cuniculus
ENSNGAG00000000810	Smarcad1	65	64.759	ENSORLG00000004869	smarcad1a	68	61.157	Oryzias_latipes
ENSNGAG00000000810	Smarcad1	65	64.759	ENSORLG00020020569	smarcad1a	68	61.157	Oryzias_latipes_hni
ENSNGAG00000000810	Smarcad1	65	64.608	ENSORLG00015009045	smarcad1a	68	60.882	Oryzias_latipes_hsok
ENSNGAG00000000810	Smarcad1	66	64.060	ENSOMEG00000023032	smarcad1a	68	60.193	Oryzias_melastigma
ENSNGAG00000000810	Smarcad1	100	92.906	ENSOGAG00000011444	SMARCAD1	100	92.906	Otolemur_garnettii
ENSNGAG00000000810	Smarcad1	100	92.802	ENSOARG00000017851	SMARCAD1	100	92.802	Ovis_aries
ENSNGAG00000000810	Smarcad1	100	94.250	ENSPPAG00000035715	SMARCAD1	100	94.250	Pan_paniscus
ENSNGAG00000000810	Smarcad1	100	93.281	ENSPPRG00000024756	SMARCAD1	100	97.651	Panthera_pardus
ENSNGAG00000000810	Smarcad1	100	93.100	ENSPTIG00000017868	SMARCAD1	100	93.100	Panthera_tigris_altaica
ENSNGAG00000000810	Smarcad1	100	94.347	ENSPTRG00000023126	SMARCAD1	100	97.987	Pan_troglodytes
ENSNGAG00000000810	Smarcad1	100	92.906	ENSPANG00000019757	SMARCAD1	100	92.906	Papio_anubis
ENSNGAG00000000810	Smarcad1	100	71.552	ENSPSIG00000010255	SMARCAD1	100	71.935	Pelodiscus_sinensis
ENSNGAG00000000810	Smarcad1	63	64.230	ENSPMGG00000010735	smarcad1a	96	62.225	Periophthalmus_magnuspinnatus
ENSNGAG00000000810	Smarcad1	100	79.122	ENSPEMG00000001854	Smarcad1	100	79.122	Peromyscus_maniculatus_bairdii
ENSNGAG00000000810	Smarcad1	99	47.013	ENSPMAG00000003516	smarcad1a	99	46.925	Petromyzon_marinus
ENSNGAG00000000810	Smarcad1	78	86.220	ENSPCIG00000008137	SMARCAD1	98	87.500	Phascolarctos_cinereus
ENSNGAG00000000810	Smarcad1	91	65.991	ENSPFOG00000019116	smarcad1a	86	61.453	Poecilia_formosa
ENSNGAG00000000810	Smarcad1	91	65.835	ENSPLAG00000000108	smarcad1a	86	61.313	Poecilia_latipinna
ENSNGAG00000000810	Smarcad1	91	65.991	ENSPMEG00000009155	smarcad1a	86	61.453	Poecilia_mexicana
ENSNGAG00000000810	Smarcad1	99	62.108	ENSPREG00000018185	smarcad1a	100	61.196	Poecilia_reticulata
ENSNGAG00000000810	Smarcad1	100	93.866	ENSPPYG00000014935	SMARCAD1	100	93.866	Pongo_abelii
ENSNGAG00000000810	Smarcad1	74	94.959	ENSPCOG00000020478	SMARCAD1	90	94.959	Propithecus_coquereli
ENSNGAG00000000810	Smarcad1	100	91.934	ENSPVAG00000001760	SMARCAD1	100	91.934	Pteropus_vampyrus
ENSNGAG00000000810	Smarcad1	62	65.705	ENSPNYG00000010087	smarcad1a	85	60.253	Pundamilia_nyererei
ENSNGAG00000000810	Smarcad1	100	50.382	ENSPNAG00000001663	smarcad1a	100	50.382	Pygocentrus_nattereri
ENSNGAG00000000810	Smarcad1	79	58.057	ENSPNAG00000010099	smarcad1b	84	59.521	Pygocentrus_nattereri
ENSNGAG00000000810	Smarcad1	100	92.788	ENSRNOG00000006391	Smarcad1	100	92.788	Rattus_norvegicus
ENSNGAG00000000810	Smarcad1	100	94.152	ENSRBIG00000041989	SMARCAD1	100	94.152	Rhinopithecus_bieti
ENSNGAG00000000810	Smarcad1	100	94.152	ENSRROG00000035309	SMARCAD1	100	94.152	Rhinopithecus_roxellana
ENSNGAG00000000810	Smarcad1	100	93.957	ENSSBOG00000032114	SMARCAD1	100	97.987	Saimiri_boliviensis_boliviensis
ENSNGAG00000000810	Smarcad1	100	81.262	ENSSHAG00000001279	SMARCAD1	100	81.262	Sarcophilus_harrisii
ENSNGAG00000000810	Smarcad1	85	55.312	ENSSFOG00015016814	smarcad1b	100	50.234	Scleropages_formosus
ENSNGAG00000000810	Smarcad1	75	57.827	ENSSFOG00015020909	smarcad1a	100	57.827	Scleropages_formosus
ENSNGAG00000000810	Smarcad1	95	65.875	ENSSMAG00000001326	smarcad1a	92	65.875	Scophthalmus_maximus
ENSNGAG00000000810	Smarcad1	66	64.435	ENSSDUG00000022338	smarcad1a	86	60.573	Seriola_dumerili
ENSNGAG00000000810	Smarcad1	95	64.137	ENSSLDG00000024986	smarcad1a	92	64.137	Seriola_lalandi_dorsalis
ENSNGAG00000000810	Smarcad1	59	84.422	ENSSPUG00000004633	SMARCAD1	100	84.422	Sphenodon_punctatus
ENSNGAG00000000810	Smarcad1	97	62.947	ENSSPAG00000001970	smarcad1a	98	60.982	Stegastes_partitus
ENSNGAG00000000810	Smarcad1	100	93.482	ENSSSCG00000009193	SMARCAD1	100	96.195	Sus_scrofa
ENSNGAG00000000810	Smarcad1	77	77.423	ENSTGUG00000003127	SMARCAD1	100	77.679	Taeniopygia_guttata
ENSNGAG00000000810	Smarcad1	85	56.995	ENSTNIG00000017585	smarcad1a	99	57.323	Tetraodon_nigroviridis
ENSNGAG00000000810	Smarcad1	91	97.222	ENSTBEG00000002789	SMARCAD1	91	97.222	Tupaia_belangeri
ENSNGAG00000000810	Smarcad1	98	93.007	ENSTTRG00000000226	SMARCAD1	99	93.448	Tursiops_truncatus
ENSNGAG00000000810	Smarcad1	100	93.580	ENSUAMG00000022262	SMARCAD1	99	95.822	Ursus_americanus
ENSNGAG00000000810	Smarcad1	100	93.574	ENSUMAG00000004549	SMARCAD1	100	93.574	Ursus_maritimus
ENSNGAG00000000810	Smarcad1	100	92.996	ENSVVUG00000007271	SMARCAD1	100	95.838	Vulpes_vulpes
ENSNGAG00000000810	Smarcad1	88	63.274	ENSXETG00000019214	smarcad1	100	64.994	Xenopus_tropicalis
ENSNGAG00000000810	Smarcad1	77	58.687	ENSXCOG00000005232	smarcad1a	88	56.830	Xiphophorus_couchianus
ENSNGAG00000000810	Smarcad1	63	65.679	ENSXMAG00000015350	smarcad1a	58	65.679	Xiphophorus_maculatus