EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000001008 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 1374 bases
Position: chrKL200115.1:1871464-1872837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000001351	RRM_1	PF00076.22	2.5e-16	1	2
ENSNGAP00000001351	RRM_1	PF00076.22	2.5e-16	2	2
ENSNGAP00000001351	HnRNPA1	PF11627.8	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000001372	-	1032	-	ENSNGAP00000001351	343 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000001008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000001008	-	55	51.485	ENSNGAG00000017486	-	88	44.127
ENSNGAG00000001008	-	64	72.926	ENSNGAG00000011947	-	62	68.421
ENSNGAG00000001008	-	74	53.261	ENSNGAG00000015156	-	87	54.982
ENSNGAG00000001008	-	77	48.571	ENSNGAG00000022667	-	82	47.547
ENSNGAG00000001008	-	78	59.655	ENSNGAG00000017304	-	85	60.584
ENSNGAG00000001008	-	57	34.328	ENSNGAG00000013451	Hnrnpd	70	33.195
ENSNGAG00000001008	-	77	40.214	ENSNGAG00000017839	-	83	38.113
ENSNGAG00000001008	-	78	48.571	ENSNGAG00000018392	-	78	52.091
ENSNGAG00000001008	-	80	74.403	ENSNGAG00000021745	Hnrnpa3	100	81.333
ENSNGAG00000001008	-	57	56.039	ENSNGAG00000016965	-	91	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001008	-	55	62.312	ENSAPOG00000014678	-	55	63.021	Acanthochromis_polyacanthus
ENSNGAG00000001008	-	82	51.662	ENSAPOG00000003688	hnrnpa3	92	54.706	Acanthochromis_polyacanthus
ENSNGAG00000001008	-	55	62.312	ENSAPOG00000003641	hnrnpa3	71	64.088	Acanthochromis_polyacanthus
ENSNGAG00000001008	-	59	49.515	ENSAPOG00000003387	HNRNPA0	58	54.118	Acanthochromis_polyacanthus
ENSNGAG00000001008	-	69	75.000	ENSAMEG00000004293	-	100	74.699	Ailuropoda_melanoleuca
ENSNGAG00000001008	-	82	51.360	ENSAOCG00000004095	hnrnpa3	90	54.955	Amphiprion_ocellaris
ENSNGAG00000001008	-	82	51.662	ENSAPEG00000022522	hnrnpa3	92	54.706	Amphiprion_percula
ENSNGAG00000001008	-	57	73.786	ENSACAG00000012234	-	84	58.255	Anolis_carolinensis
ENSNGAG00000001008	-	64	70.213	ENSANAG00000037918	-	92	57.550	Aotus_nancymaae
ENSNGAG00000001008	-	59	68.372	ENSCAPG00000003643	-	88	58.434	Cavia_aperea
ENSNGAG00000001008	-	58	56.604	ENSCATG00000038569	-	89	53.797	Cercocebus_atys
ENSNGAG00000001008	-	67	58.159	ENSCSAG00000011517	-	55	55.093	Chlorocebus_sabaeus
ENSNGAG00000001008	-	56	77.451	ENSCANG00000017881	-	87	62.577	Colobus_angolensis_palliatus
ENSNGAG00000001008	-	76	67.159	ENSCGRG00001010070	-	90	67.159	Cricetulus_griseus_chok1gshd
ENSNGAG00000001008	-	76	67.159	ENSCGRG00000007592	-	88	67.159	Cricetulus_griseus_crigri
ENSNGAG00000001008	-	51	74.176	ENSCGRG00000003686	-	87	66.667	Cricetulus_griseus_crigri
ENSNGAG00000001008	-	54	64.646	ENSCVAG00000018995	hnrnpa3	89	55.305	Cyprinodon_variegatus
ENSNGAG00000001008	-	57	63.592	ENSDARG00000059351	hnrnpa3	97	63.636	Danio_rerio
ENSNGAG00000001008	-	63	71.179	ENSDNOG00000031964	-	90	66.667	Dasypus_novemcinctus
ENSNGAG00000001008	-	50	66.120	ENSETEG00000007747	-	91	66.031	Echinops_telfairi
ENSNGAG00000001008	-	52	54.592	ENSEBUG00000016570	HNRNPA0	87	46.855	Eptatretus_burgeri
ENSNGAG00000001008	-	75	59.191	ENSELUG00000023080	hnrnpa3	87	58.712	Esox_lucius
ENSNGAG00000001008	-	54	49.215	ENSFDAG00000019780	HNRNPA0	93	47.345	Fukomys_damarensis
ENSNGAG00000001008	-	55	65.990	ENSFDAG00000018739	-	94	55.685	Fukomys_damarensis
ENSNGAG00000001008	-	83	55.705	ENSFDAG00000009547	-	80	55.172	Fukomys_damarensis
ENSNGAG00000001008	-	73	67.315	ENSFDAG00000014067	-	78	67.315	Fukomys_damarensis
ENSNGAG00000001008	-	73	61.303	ENSGACG00000004477	hnrnpa3	86	60.920	Gasterosteus_aculeatus
ENSNGAG00000001008	-	78	70.036	ENSHGLG00000014577	-	99	70.036	Heterocephalus_glaber_female
ENSNGAG00000001008	-	63	71.366	ENSHGLG00100006677	-	91	63.830	Heterocephalus_glaber_male
ENSNGAG00000001008	-	74	57.716	ENSHGLG00100001336	-	91	58.333	Heterocephalus_glaber_male
ENSNGAG00000001008	-	54	63.452	ENSIPUG00000019815	RO32	90	55.556	Ictalurus_punctatus
ENSNGAG00000001008	-	57	66.346	ENSSTOG00000019374	-	85	55.696	Ictidomys_tridecemlineatus
ENSNGAG00000001008	-	51	49.457	ENSJJAG00000006954	Hnrnpa0	83	43.969	Jaculus_jaculus
ENSNGAG00000001008	-	75	51.780	ENSLBEG00000016767	hnrnpa3	98	56.970	Labrus_bergylta
ENSNGAG00000001008	-	63	65.351	ENSLACG00000008189	hnrnpa3	91	57.143	Latimeria_chalumnae
ENSNGAG00000001008	-	76	43.357	ENSLACG00000014480	HNRNPA0	55	49.419	Latimeria_chalumnae
ENSNGAG00000001008	-	51	68.449	ENSLOCG00000006986	hnrnpa3	64	57.977	Lepisosteus_oculatus
ENSNGAG00000001008	-	58	51.751	ENSLAFG00000027712	-	99	66.894	Loxodonta_africana
ENSNGAG00000001008	-	58	57.075	ENSMMUG00000031232	-	91	51.020	Macaca_mulatta
ENSNGAG00000001008	-	85	56.275	ENSMNEG00000038943	-	84	58.222	Macaca_nemestrina
ENSNGAG00000001008	-	58	56.132	ENSMLEG00000033415	-	89	54.313	Mandrillus_leucophaeus
ENSNGAG00000001008	-	53	51.546	ENSMAMG00000017754	HNRNPA0	66	54.118	Mastacembelus_armatus
ENSNGAG00000001008	-	57	63.768	ENSMALG00000009691	hnrnpa3	95	53.755	Monopterus_albus
ENSNGAG00000001008	-	84	75.497	ENSODEG00000016578	-	91	74.740	Octodon_degus
ENSNGAG00000001008	-	54	65.152	ENSORLG00020020788	hnrnpa3	92	57.188	Oryzias_latipes_hni
ENSNGAG00000001008	-	74	38.754	ENSORLG00015017144	-	55	45.509	Oryzias_latipes_hsok
ENSNGAG00000001008	-	75	34.899	ENSORLG00015016157	-	58	44.048	Oryzias_latipes_hsok
ENSNGAG00000001008	-	54	68.182	ENSPKIG00000022916	hnrnpa3	76	59.917	Paramormyrops_kingsleyae
ENSNGAG00000001008	-	52	60.209	ENSPMGG00000000747	hnrnpa3	89	45.687	Periophthalmus_magnuspinnatus
ENSNGAG00000001008	-	76	41.852	ENSPEMG00000020274	Hnrnpa0	66	50.588	Peromyscus_maniculatus_bairdii
ENSNGAG00000001008	-	54	56.219	ENSPMAG00000004449	-	77	58.470	Petromyzon_marinus
ENSNGAG00000001008	-	54	64.141	ENSPFOG00000014049	hnrnpa3	89	54.967	Poecilia_formosa
ENSNGAG00000001008	-	54	64.141	ENSPMEG00000006390	hnrnpa3	89	54.967	Poecilia_mexicana
ENSNGAG00000001008	-	62	63.393	ENSPREG00000005411	hnrnpa3	92	55.096	Poecilia_reticulata
ENSNGAG00000001008	-	73	72.043	ENSPPYG00000001012	-	89	70.251	Pongo_abelii
ENSNGAG00000001008	-	50	62.703	ENSPNYG00000008424	hnrnpa3	74	64.804	Pundamilia_nyererei
ENSNGAG00000001008	-	54	63.000	ENSSFOG00015016280	hnrnpa1	89	51.475	Scleropages_formosus
ENSNGAG00000001008	-	59	62.911	ENSSFOG00015001814	hnrnpa3	83	69.388	Scleropages_formosus
ENSNGAG00000001008	-	55	62.376	ENSSMAG00000015218	hnrnpa3	84	53.583	Scophthalmus_maximus
ENSNGAG00000001008	-	51	63.441	ENSSDUG00000000381	hnrnpa3	94	55.625	Seriola_dumerili
ENSNGAG00000001008	-	75	53.420	ENSSPAG00000008969	hnrnpa3	94	56.113	Stegastes_partitus
ENSNGAG00000001008	-	64	60.088	ENSSSCG00000001098	-	100	82.857	Sus_scrofa
ENSNGAG00000001008	-	52	51.562	ENSSSCG00000033635	-	50	51.648	Sus_scrofa
ENSNGAG00000001008	-	52	51.042	ENSSSCG00000040926	-	50	51.648	Sus_scrofa
ENSNGAG00000001008	-	54	64.141	ENSTRUG00000017504	hnrnpa3	89	53.974	Takifugu_rubripes
ENSNGAG00000001008	-	54	63.636	ENSTNIG00000016958	hnrnpa3	90	51.757	Tetraodon_nigroviridis
ENSNGAG00000001008	-	59	69.953	ENSXETG00000001806	hnrnpa3	79	71.795	Xenopus_tropicalis
ENSNGAG00000001008	-	54	64.141	ENSXMAG00000000439	hnrnpa3	92	54.777	Xiphophorus_maculatus