EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000001260 (Gene tree)
Gene ID: 103747564
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 18870 bases
Position: chrKL203894.1:465941-484810
Accession: 103747564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000001754	RRM_1	PF00076.22	2e-28	1	2
ENSNGAP00000001754	RRM_1	PF00076.22	2e-28	2	2
ENSNGAP00000001748	RRM_1	PF00076.22	4.9e-28	1	2
ENSNGAP00000001748	RRM_1	PF00076.22	4.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000001783	-	2214	XM_008850053	ENSNGAP00000001748	737 (aa)	XP_008848275	-
ENSNGAT00000001790	-	1785	-	ENSNGAP00000001754	594 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000001260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000001260	-	57	56.083	ENSNGAG00000000905	Raver2	54	54.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001260	-	100	89.189	ENSG00000161847	RAVER1	100	89.189	Homo_sapiens
ENSNGAG00000001260	-	96	48.133	ENSAPOG00000017267	raver1	50	64.000	Acanthochromis_polyacanthus
ENSNGAG00000001260	-	100	87.871	ENSAMEG00000011738	RAVER1	98	87.871	Ailuropoda_melanoleuca
ENSNGAG00000001260	-	66	64.141	ENSAOCG00000005128	raver1	52	64.141	Amphiprion_ocellaris
ENSNGAG00000001260	-	77	61.039	ENSAPEG00000010854	raver1	83	61.039	Amphiprion_percula
ENSNGAG00000001260	-	100	49.462	ENSATEG00000021004	raver1	91	49.241	Anabas_testudineus
ENSNGAG00000001260	-	86	60.521	ENSACAG00000008386	-	91	58.621	Anolis_carolinensis
ENSNGAG00000001260	-	100	86.370	ENSANAG00000028226	RAVER1	98	87.854	Aotus_nancymaae
ENSNGAG00000001260	-	96	48.493	ENSACLG00000018492	raver1	56	65.063	Astatotilapia_calliptera
ENSNGAG00000001260	-	80	78.333	ENSAMXG00000005132	raver1	81	72.222	Astyanax_mexicanus
ENSNGAG00000001260	-	100	87.280	ENSBTAG00000015721	RAVER1	97	91.272	Bos_taurus
ENSNGAG00000001260	-	100	86.505	ENSCJAG00000005671	RAVER1	98	87.989	Callithrix_jacchus
ENSNGAG00000001260	-	100	87.551	ENSCAFG00000017861	RAVER1	98	88.092	Canis_familiaris
ENSNGAG00000001260	-	100	87.551	ENSCAFG00020024449	RAVER1	100	88.092	Canis_lupus_dingo
ENSNGAG00000001260	-	100	85.714	ENSCHIG00000006718	RAVER1	100	86.253	Capra_hircus
ENSNGAG00000001260	-	91	82.815	ENSTSYG00000027107	RAVER1	100	82.815	Carlito_syrichta
ENSNGAG00000001260	-	99	77.673	ENSCAPG00000002269	RAVER1	100	86.826	Cavia_aperea
ENSNGAG00000001260	-	100	88.259	ENSCPOG00000001008	RAVER1	100	88.799	Cavia_porcellus
ENSNGAG00000001260	-	100	87.027	ENSCCAG00000031723	RAVER1	98	87.973	Cebus_capucinus
ENSNGAG00000001260	-	100	89.324	ENSCATG00000043863	RAVER1	98	89.324	Cercocebus_atys
ENSNGAG00000001260	-	100	89.098	ENSCLAG00000009336	RAVER1	100	88.694	Chinchilla_lanigera
ENSNGAG00000001260	-	100	89.459	ENSCSAG00000007317	RAVER1	84	89.459	Chlorocebus_sabaeus
ENSNGAG00000001260	-	96	61.985	ENSCPBG00000005349	-	96	61.032	Chrysemys_picta_bellii
ENSNGAG00000001260	-	100	89.459	ENSCANG00000008337	RAVER1	98	89.459	Colobus_angolensis_palliatus
ENSNGAG00000001260	-	100	92.328	ENSCGRG00001013260	-	100	92.328	Cricetulus_griseus_chok1gshd
ENSNGAG00000001260	-	100	92.328	ENSCGRG00000015138	-	100	92.328	Cricetulus_griseus_crigri
ENSNGAG00000001260	-	74	78.846	ENSCSEG00000021092	raver1	76	78.846	Cynoglossus_semilaevis
ENSNGAG00000001260	-	98	49.324	ENSCVAG00000013971	raver1	81	60.606	Cyprinodon_variegatus
ENSNGAG00000001260	-	81	57.230	ENSDARG00000052617	raver1	70	67.857	Danio_rerio
ENSNGAG00000001260	-	92	89.189	ENSDNOG00000035742	-	75	89.189	Dasypus_novemcinctus
ENSNGAG00000001260	-	100	81.963	ENSDORG00000010106	-	100	81.300	Dipodomys_ordii
ENSNGAG00000001260	-	91	64.663	ENSETEG00000008201	-	87	87.817	Echinops_telfairi
ENSNGAG00000001260	-	67	90.385	ENSEASG00005010544	-	90	87.615	Equus_asinus_asinus
ENSNGAG00000001260	-	100	89.623	ENSECAG00000024966	RAVER1	98	90.162	Equus_caballus
ENSNGAG00000001260	-	98	49.728	ENSELUG00000023287	raver1	79	58.947	Esox_lucius
ENSNGAG00000001260	-	100	89.218	ENSFCAG00000009435	RAVER1	98	89.218	Felis_catus
ENSNGAG00000001260	-	100	89.367	ENSFDAG00000015113	RAVER1	100	89.367	Fukomys_damarensis
ENSNGAG00000001260	-	81	58.763	ENSGMOG00000003649	raver1	80	58.763	Gadus_morhua
ENSNGAG00000001260	-	79	41.431	ENSGALG00000050608	-	62	41.246	Gallus_gallus
ENSNGAG00000001260	-	100	49.407	ENSGAFG00000015944	raver1	53	65.152	Gambusia_affinis
ENSNGAG00000001260	-	61	65.014	ENSGACG00000013818	raver1	97	48.583	Gasterosteus_aculeatus
ENSNGAG00000001260	-	96	62.834	ENSGAGG00000011748	-	96	74.799	Gopherus_agassizii
ENSNGAG00000001260	-	100	88.919	ENSGGOG00000006015	RAVER1	98	88.919	Gorilla_gorilla
ENSNGAG00000001260	-	96	48.138	ENSHBUG00000021210	raver1	56	65.063	Haplochromis_burtoni
ENSNGAG00000001260	-	100	89.367	ENSHGLG00000015460	RAVER1	100	89.233	Heterocephalus_glaber_female
ENSNGAG00000001260	-	100	89.367	ENSHGLG00100000812	RAVER1	100	89.233	Heterocephalus_glaber_male
ENSNGAG00000001260	-	98	48.626	ENSHCOG00000000449	raver1	53	63.224	Hippocampus_comes
ENSNGAG00000001260	-	97	51.595	ENSIPUG00000013153	raver1	81	59.756	Ictalurus_punctatus
ENSNGAG00000001260	-	100	89.609	ENSSTOG00000003241	RAVER1	100	89.609	Ictidomys_tridecemlineatus
ENSNGAG00000001260	-	100	89.664	ENSJJAG00000018219	-	100	89.396	Jaculus_jaculus
ENSNGAG00000001260	-	98	48.327	ENSKMAG00000017355	raver1	79	59.000	Kryptolebias_marmoratus
ENSNGAG00000001260	-	68	63.793	ENSLBEG00000008268	raver1	69	56.634	Labrus_bergylta
ENSNGAG00000001260	-	90	59.344	ENSLACG00000005809	-	99	60.029	Latimeria_chalumnae
ENSNGAG00000001260	-	96	52.490	ENSLOCG00000007500	raver1	92	53.028	Lepisosteus_oculatus
ENSNGAG00000001260	-	100	87.887	ENSLAFG00000003664	-	96	92.500	Loxodonta_africana
ENSNGAG00000001260	-	100	89.189	ENSMFAG00000037977	RAVER1	98	89.189	Macaca_fascicularis
ENSNGAG00000001260	-	100	89.189	ENSMMUG00000014897	RAVER1	98	89.189	Macaca_mulatta
ENSNGAG00000001260	-	100	89.189	ENSMNEG00000028390	RAVER1	98	89.189	Macaca_nemestrina
ENSNGAG00000001260	-	100	89.324	ENSMLEG00000041959	RAVER1	98	89.324	Mandrillus_leucophaeus
ENSNGAG00000001260	-	74	77.358	ENSMAMG00000012059	raver1	77	77.358	Mastacembelus_armatus
ENSNGAG00000001260	-	96	48.493	ENSMZEG00005019002	raver1	56	65.063	Maylandia_zebra
ENSNGAG00000001260	-	100	91.141	ENSMAUG00000017948	-	100	91.141	Mesocricetus_auratus
ENSNGAG00000001260	-	99	86.856	ENSMICG00000010326	RAVER1	99	86.992	Microcebus_murinus
ENSNGAG00000001260	-	100	92.194	ENSMOCG00000015553	-	100	92.194	Microtus_ochrogaster
ENSNGAG00000001260	-	99	49.262	ENSMMOG00000012093	raver1	54	64.646	Mola_mola
ENSNGAG00000001260	-	97	73.582	ENSMODG00000005584	-	89	73.444	Monodelphis_domestica
ENSNGAG00000001260	-	99	49.007	ENSMALG00000016569	raver1	80	54.630	Monopterus_albus
ENSNGAG00000001260	-	100	90.254	MGP_CAROLIEiJ_G0031860	-	100	90.254	Mus_caroli
ENSNGAG00000001260	-	100	90.521	ENSMUSG00000010205	Raver1	100	90.521	Mus_musculus
ENSNGAG00000001260	-	100	88.977	MGP_PahariEiJ_G0014726	-	100	89.907	Mus_pahari
ENSNGAG00000001260	-	100	90.387	MGP_SPRETEiJ_G0032984	-	100	90.387	Mus_spretus
ENSNGAG00000001260	-	100	88.949	ENSMPUG00000006712	RAVER1	98	88.949	Mustela_putorius_furo
ENSNGAG00000001260	-	100	86.739	ENSMLUG00000012328	RAVER1	100	87.009	Myotis_lucifugus
ENSNGAG00000001260	-	96	44.202	ENSNBRG00000010139	raver1	78	57.576	Neolamprologus_brichardi
ENSNGAG00000001260	-	100	89.324	ENSNLEG00000012181	RAVER1	98	89.324	Nomascus_leucogenys
ENSNGAG00000001260	-	90	72.985	ENSMEUG00000003281	-	100	72.214	Notamacropus_eugenii
ENSNGAG00000001260	-	51	85.156	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
ENSNGAG00000001260	-	100	89.233	ENSODEG00000016260	RAVER1	100	88.829	Octodon_degus
ENSNGAG00000001260	-	96	50.702	ENSONIG00000001559	raver1	99	50.559	Oreochromis_niloticus
ENSNGAG00000001260	-	100	82.409	ENSOCUG00000020918	RAVER1	98	82.950	Oryctolagus_cuniculus
ENSNGAG00000001260	-	70	63.902	ENSORLG00000005458	raver1	67	64.899	Oryzias_latipes
ENSNGAG00000001260	-	70	63.814	ENSORLG00020004392	raver1	67	64.810	Oryzias_latipes_hni
ENSNGAG00000001260	-	70	63.415	ENSORLG00015017222	raver1	67	64.394	Oryzias_latipes_hsok
ENSNGAG00000001260	-	62	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSNGAG00000001260	-	100	88.092	ENSOGAG00000011071	RAVER1	98	88.092	Otolemur_garnettii
ENSNGAG00000001260	-	100	84.097	ENSOARG00000015886	RAVER1	98	84.636	Ovis_aries
ENSNGAG00000001260	-	100	89.189	ENSPPAG00000002611	RAVER1	98	89.189	Pan_paniscus
ENSNGAG00000001260	-	100	89.623	ENSPPRG00000009912	RAVER1	98	89.623	Panthera_pardus
ENSNGAG00000001260	-	100	89.189	ENSPTRG00000010466	RAVER1	98	89.189	Pan_troglodytes
ENSNGAG00000001260	-	100	89.189	ENSPANG00000004122	RAVER1	98	89.189	Papio_anubis
ENSNGAG00000001260	-	100	92.070	ENSPEMG00000016411	-	100	92.339	Peromyscus_maniculatus_bairdii
ENSNGAG00000001260	-	100	75.201	ENSPCIG00000018695	-	99	78.491	Phascolarctos_cinereus
ENSNGAG00000001260	-	98	50.201	ENSPFOG00000007016	raver1	78	60.417	Poecilia_formosa
ENSNGAG00000001260	-	69	64.792	ENSPLAG00000020793	raver1	78	56.024	Poecilia_latipinna
ENSNGAG00000001260	-	69	64.548	ENSPMEG00000011220	raver1	67	66.329	Poecilia_mexicana
ENSNGAG00000001260	-	73	88.372	ENSPREG00000006864	raver1	76	88.372	Poecilia_reticulata
ENSNGAG00000001260	-	100	87.551	ENSPPYG00000010514	RAVER1	84	88.784	Pongo_abelii
ENSNGAG00000001260	-	100	88.172	ENSPCOG00000026605	RAVER1	98	88.575	Propithecus_coquereli
ENSNGAG00000001260	-	100	88.904	ENSPVAG00000003689	RAVER1	100	89.175	Pteropus_vampyrus
ENSNGAG00000001260	-	61	82.353	ENSPNYG00000013284	raver1	56	65.063	Pundamilia_nyererei
ENSNGAG00000001260	-	96	52.210	ENSPNAG00000015476	raver1	91	51.307	Pygocentrus_nattereri
ENSNGAG00000001260	-	100	90.254	ENSRNOG00000020710	Raver1	100	90.387	Rattus_norvegicus
ENSNGAG00000001260	-	100	89.189	ENSRBIG00000034702	RAVER1	98	89.189	Rhinopithecus_bieti
ENSNGAG00000001260	-	100	87.027	ENSRROG00000031186	RAVER1	98	87.027	Rhinopithecus_roxellana
ENSNGAG00000001260	-	100	84.865	ENSSBOG00000023423	RAVER1	98	85.405	Saimiri_boliviensis_boliviensis
ENSNGAG00000001260	-	90	73.964	ENSSHAG00000008181	-	90	73.669	Sarcophilus_harrisii
ENSNGAG00000001260	-	80	59.524	ENSSMAG00000004546	raver1	79	56.566	Scophthalmus_maximus
ENSNGAG00000001260	-	83	54.221	ENSSDUG00000021063	raver1	83	55.435	Seriola_dumerili
ENSNGAG00000001260	-	69	63.614	ENSSLDG00000014505	raver1	54	64.736	Seriola_lalandi_dorsalis
ENSNGAG00000001260	-	66	64.899	ENSSPAG00000000688	raver1	53	64.899	Stegastes_partitus
ENSNGAG00000001260	-	100	89.595	ENSSSCG00000013650	-	98	90.000	Sus_scrofa
ENSNGAG00000001260	-	98	49.180	ENSTRUG00000025641	raver1	65	55.248	Takifugu_rubripes
ENSNGAG00000001260	-	100	88.769	ENSTTRG00000009552	RAVER1	100	89.175	Tursiops_truncatus
ENSNGAG00000001260	-	100	89.892	ENSUAMG00000020385	RAVER1	98	89.892	Ursus_americanus
ENSNGAG00000001260	-	100	87.415	ENSVVUG00000028976	RAVER1	98	87.957	Vulpes_vulpes
ENSNGAG00000001260	-	100	53.887	ENSXETG00000011622	raver1	95	55.062	Xenopus_tropicalis
ENSNGAG00000001260	-	99	49.933	ENSXCOG00000016368	raver1	77	58.586	Xiphophorus_couchianus
ENSNGAG00000001260	-	99	49.730	ENSXMAG00000000217	raver1	78	58.586	Xiphophorus_maculatus