EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000001275 (Gene tree)
Gene ID: 103749882
Gene Symbol: Blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 82280 bases
Position: chrKL204459.1:668022-750301
Accession: 103749882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000001756	HRDC	PF00570.23	8.4e-13	1	1
ENSNGAP00000001749	HRDC	PF00570.23	8.5e-13	1	1
ENSNGAP00000001756	BDHCT	PF08072.11	3e-23	1	1
ENSNGAP00000001749	BDHCT	PF08072.11	3e-23	1	1
ENSNGAP00000001756	DEAD	PF00270.29	5.2e-20	1	1
ENSNGAP00000001749	DEAD	PF00270.29	5.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000001784	-	4781	XM_008852772	ENSNGAP00000001749	1411 (aa)	XP_008850994	-
ENSNGAT00000001792	-	4194	-	ENSNGAP00000001756	1397 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000001275's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03440	Homologous recombination	KEGG
ngi03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001275	Blm	100	80.197	ENSG00000197299	BLM	100	80.973	Homo_sapiens
ENSNGAG00000001275	Blm	59	62.156	ENSAPOG00000017966	blm	61	62.156	Acanthochromis_polyacanthus
ENSNGAG00000001275	Blm	100	77.621	ENSAMEG00000013843	BLM	100	77.989	Ailuropoda_melanoleuca
ENSNGAG00000001275	Blm	69	61.990	ENSACIG00000023762	blm	90	61.990	Amphilophus_citrinellus
ENSNGAG00000001275	Blm	59	61.814	ENSAOCG00000003318	blm	57	64.295	Amphiprion_ocellaris
ENSNGAG00000001275	Blm	55	64.168	ENSAPEG00000018105	blm	56	64.168	Amphiprion_percula
ENSNGAG00000001275	Blm	84	66.201	ENSATEG00000006421	blm	84	66.201	Anabas_testudineus
ENSNGAG00000001275	Blm	81	57.724	ENSAPLG00000006878	BLM	98	57.488	Anas_platyrhynchos
ENSNGAG00000001275	Blm	63	69.045	ENSACAG00000014275	BLM	84	69.045	Anolis_carolinensis
ENSNGAG00000001275	Blm	100	79.422	ENSANAG00000038415	BLM	100	79.211	Aotus_nancymaae
ENSNGAG00000001275	Blm	91	61.484	ENSACLG00000020354	blm	89	62.040	Astatotilapia_calliptera
ENSNGAG00000001275	Blm	58	64.368	ENSAMXG00000016970	blm	87	61.538	Astyanax_mexicanus
ENSNGAG00000001275	Blm	93	79.934	ENSBTAG00000020301	BLM	100	79.934	Bos_taurus
ENSNGAG00000001275	Blm	100	79.211	ENSCJAG00000009803	BLM	100	79.070	Callithrix_jacchus
ENSNGAG00000001275	Blm	100	77.542	ENSCAFG00000012385	BLM	100	77.684	Canis_familiaris
ENSNGAG00000001275	Blm	100	77.472	ENSCAFG00020016111	BLM	96	89.726	Canis_lupus_dingo
ENSNGAG00000001275	Blm	100	76.582	ENSCHIG00000010329	BLM	100	78.618	Capra_hircus
ENSNGAG00000001275	Blm	100	79.366	ENSTSYG00000012368	BLM	100	80.352	Carlito_syrichta
ENSNGAG00000001275	Blm	88	84.416	ENSCAPG00000017976	BLM	99	83.550	Cavia_aperea
ENSNGAG00000001275	Blm	100	76.284	ENSCPOG00000001761	BLM	100	76.566	Cavia_porcellus
ENSNGAG00000001275	Blm	100	78.843	ENSCCAG00000023069	BLM	100	78.632	Cebus_capucinus
ENSNGAG00000001275	Blm	100	79.704	ENSCATG00000040609	BLM	92	93.531	Cercocebus_atys
ENSNGAG00000001275	Blm	100	77.903	ENSCLAG00000012111	BLM	100	78.607	Chinchilla_lanigera
ENSNGAG00000001275	Blm	100	79.383	ENSCSAG00000017040	BLM	100	80.084	Chlorocebus_sabaeus
ENSNGAG00000001275	Blm	91	75.579	ENSCHOG00000006255	BLM	93	75.579	Choloepus_hoffmanni
ENSNGAG00000001275	Blm	89	54.393	ENSCPBG00000025000	BLM	88	73.305	Chrysemys_picta_bellii
ENSNGAG00000001275	Blm	89	70.777	ENSCANG00000034808	BLM	100	70.777	Colobus_angolensis_palliatus
ENSNGAG00000001275	Blm	100	83.168	ENSCGRG00001024897	Blm	100	83.816	Cricetulus_griseus_chok1gshd
ENSNGAG00000001275	Blm	68	80.000	ENSCGRG00000016261	Blm	97	80.209	Cricetulus_griseus_crigri
ENSNGAG00000001275	Blm	58	62.395	ENSCSEG00000013483	blm	64	62.275	Cynoglossus_semilaevis
ENSNGAG00000001275	Blm	99	46.662	ENSDARG00000077089	blm	58	63.420	Danio_rerio
ENSNGAG00000001275	Blm	99	76.050	ENSDNOG00000010159	BLM	99	75.630	Dasypus_novemcinctus
ENSNGAG00000001275	Blm	74	82.167	ENSDORG00000011033	Blm	100	81.879	Dipodomys_ordii
ENSNGAG00000001275	Blm	86	64.115	ENSETEG00000015019	BLM	86	64.115	Echinops_telfairi
ENSNGAG00000001275	Blm	100	77.644	ENSEASG00005006727	BLM	100	77.535	Equus_asinus_asinus
ENSNGAG00000001275	Blm	100	79.135	ENSECAG00000011405	BLM	100	79.414	Equus_caballus
ENSNGAG00000001275	Blm	98	72.760	ENSEEUG00000001434	BLM	98	72.399	Erinaceus_europaeus
ENSNGAG00000001275	Blm	84	65.952	ENSELUG00000019098	blm	83	65.909	Esox_lucius
ENSNGAG00000001275	Blm	100	76.127	ENSFCAG00000006087	BLM	100	76.690	Felis_catus
ENSNGAG00000001275	Blm	74	57.963	ENSFALG00000010981	BLM	89	55.614	Ficedula_albicollis
ENSNGAG00000001275	Blm	100	70.836	ENSFDAG00000012658	BLM	100	73.455	Fukomys_damarensis
ENSNGAG00000001275	Blm	59	61.871	ENSFHEG00000002553	blm	59	62.696	Fundulus_heteroclitus
ENSNGAG00000001275	Blm	100	44.268	ENSGMOG00000016431	blm	91	59.849	Gadus_morhua
ENSNGAG00000001275	Blm	79	56.340	ENSGALG00000008256	BLM	99	49.831	Gallus_gallus
ENSNGAG00000001275	Blm	55	64.820	ENSGAFG00000001117	blm	59	64.948	Gambusia_affinis
ENSNGAG00000001275	Blm	99	45.745	ENSGACG00000010863	blm	100	73.384	Gasterosteus_aculeatus
ENSNGAG00000001275	Blm	89	51.883	ENSGAGG00000005383	BLM	89	72.605	Gopherus_agassizii
ENSNGAG00000001275	Blm	100	80.183	ENSGGOG00000007710	BLM	92	93.834	Gorilla_gorilla
ENSNGAG00000001275	Blm	88	62.545	ENSHBUG00000015943	blm	88	62.545	Haplochromis_burtoni
ENSNGAG00000001275	Blm	100	78.672	ENSHGLG00000013231	BLM	99	79.070	Heterocephalus_glaber_female
ENSNGAG00000001275	Blm	74	54.321	ENSHCOG00000011455	blm	83	61.290	Hippocampus_comes
ENSNGAG00000001275	Blm	74	54.475	ENSIPUG00000000529	blm	68	65.548	Ictalurus_punctatus
ENSNGAG00000001275	Blm	100	79.155	ENSSTOG00000005000	BLM	100	80.098	Ictidomys_tridecemlineatus
ENSNGAG00000001275	Blm	66	89.590	ENSJJAG00000016322	Blm	95	89.590	Jaculus_jaculus
ENSNGAG00000001275	Blm	88	62.816	ENSKMAG00000016608	blm	87	63.101	Kryptolebias_marmoratus
ENSNGAG00000001275	Blm	50	67.714	ENSLBEG00000018729	blm	80	67.714	Labrus_bergylta
ENSNGAG00000001275	Blm	59	66.509	ENSLACG00000006490	BLM	99	49.502	Latimeria_chalumnae
ENSNGAG00000001275	Blm	86	52.107	ENSLOCG00000014302	blm	87	62.456	Lepisosteus_oculatus
ENSNGAG00000001275	Blm	100	79.915	ENSMFAG00000042982	BLM	92	94.070	Macaca_fascicularis
ENSNGAG00000001275	Blm	100	79.986	ENSMMUG00000019526	BLM	92	94.070	Macaca_mulatta
ENSNGAG00000001275	Blm	98	78.468	ENSMNEG00000031251	BLM	92	93.801	Macaca_nemestrina
ENSNGAG00000001275	Blm	100	77.449	ENSMLEG00000032934	BLM	100	77.801	Mandrillus_leucophaeus
ENSNGAG00000001275	Blm	59	63.389	ENSMAMG00000008726	blm	60	63.915	Mastacembelus_armatus
ENSNGAG00000001275	Blm	88	62.291	ENSMZEG00005022323	blm	87	62.291	Maylandia_zebra
ENSNGAG00000001275	Blm	100	82.569	ENSMAUG00000008953	Blm	99	83.204	Mesocricetus_auratus
ENSNGAG00000001275	Blm	100	79.592	ENSMICG00000034442	BLM	100	79.873	Microcebus_murinus
ENSNGAG00000001275	Blm	100	81.356	ENSMOCG00000016367	Blm	99	81.285	Microtus_ochrogaster
ENSNGAG00000001275	Blm	60	62.045	ENSMMOG00000006959	blm	60	62.162	Mola_mola
ENSNGAG00000001275	Blm	99	62.466	ENSMODG00000019449	BLM	99	62.867	Monodelphis_domestica
ENSNGAG00000001275	Blm	71	64.133	ENSMALG00000007323	blm	87	64.014	Monopterus_albus
ENSNGAG00000001275	Blm	100	80.780	MGP_CAROLIEiJ_G0029907	Blm	100	80.780	Mus_caroli
ENSNGAG00000001275	Blm	100	80.805	ENSMUSG00000030528	Blm	100	80.805	Mus_musculus
ENSNGAG00000001275	Blm	100	81.334	MGP_PahariEiJ_G0013129	Blm	100	81.263	Mus_pahari
ENSNGAG00000001275	Blm	100	80.905	MGP_SPRETEiJ_G0031009	Blm	100	80.905	Mus_spretus
ENSNGAG00000001275	Blm	85	76.885	ENSMPUG00000015657	BLM	99	76.821	Mustela_putorius_furo
ENSNGAG00000001275	Blm	100	75.932	ENSMLUG00000014697	BLM	100	76.107	Myotis_lucifugus
ENSNGAG00000001275	Blm	100	78.576	ENSNLEG00000012087	BLM	100	83.636	Nomascus_leucogenys
ENSNGAG00000001275	Blm	99	60.296	ENSMEUG00000007253	BLM	99	60.719	Notamacropus_eugenii
ENSNGAG00000001275	Blm	95	86.092	ENSOPRG00000011667	BLM	95	86.231	Ochotona_princeps
ENSNGAG00000001275	Blm	74	79.386	ENSODEG00000015373	BLM	100	79.482	Octodon_degus
ENSNGAG00000001275	Blm	59	62.114	ENSONIG00000015193	blm	59	62.352	Oreochromis_niloticus
ENSNGAG00000001275	Blm	54	80.990	ENSOANG00000009316	-	99	80.469	Ornithorhynchus_anatinus
ENSNGAG00000001275	Blm	99	73.239	ENSOCUG00000013969	BLM	99	72.958	Oryctolagus_cuniculus
ENSNGAG00000001275	Blm	70	63.114	ENSORLG00000008110	blm	87	63.234	Oryzias_latipes
ENSNGAG00000001275	Blm	70	62.981	ENSORLG00020004812	blm	87	63.114	Oryzias_latipes_hni
ENSNGAG00000001275	Blm	70	63.278	ENSORLG00015018640	blm	87	63.278	Oryzias_latipes_hsok
ENSNGAG00000001275	Blm	88	62.336	ENSOMEG00000023545	blm	87	62.724	Oryzias_melastigma
ENSNGAG00000001275	Blm	100	75.158	ENSOGAG00000005708	BLM	100	75.369	Otolemur_garnettii
ENSNGAG00000001275	Blm	100	75.470	ENSOARG00000012875	BLM	100	76.832	Ovis_aries
ENSNGAG00000001275	Blm	100	79.915	ENSPPAG00000032173	BLM	100	80.691	Pan_paniscus
ENSNGAG00000001275	Blm	100	75.986	ENSPPRG00000002471	BLM	100	76.479	Panthera_pardus
ENSNGAG00000001275	Blm	100	75.527	ENSPTIG00000016168	BLM	100	76.301	Panthera_tigris_altaica
ENSNGAG00000001275	Blm	100	79.845	ENSPTRG00000007460	BLM	100	80.620	Pan_troglodytes
ENSNGAG00000001275	Blm	100	79.915	ENSPANG00000018572	BLM	92	93.801	Papio_anubis
ENSNGAG00000001275	Blm	73	62.411	ENSPKIG00000008954	blm	70	62.648	Paramormyrops_kingsleyae
ENSNGAG00000001275	Blm	51	66.345	ENSPMGG00000006629	blm	80	66.621	Periophthalmus_magnuspinnatus
ENSNGAG00000001275	Blm	100	80.878	ENSPEMG00000017348	Blm	100	81.343	Peromyscus_maniculatus_bairdii
ENSNGAG00000001275	Blm	50	59.129	ENSPMAG00000000445	blm	96	59.524	Petromyzon_marinus
ENSNGAG00000001275	Blm	99	62.346	ENSPCIG00000006609	BLM	99	62.689	Phascolarctos_cinereus
ENSNGAG00000001275	Blm	63	64.987	ENSPFOG00000005059	blm	99	45.911	Poecilia_formosa
ENSNGAG00000001275	Blm	63	64.987	ENSPMEG00000000321	blm	85	64.987	Poecilia_mexicana
ENSNGAG00000001275	Blm	100	78.365	ENSPPYG00000006784	BLM	100	79.140	Pongo_abelii
ENSNGAG00000001275	Blm	74	84.848	ENSPCAG00000008960	BLM	74	84.848	Procavia_capensis
ENSNGAG00000001275	Blm	100	75.088	ENSPCOG00000000439	BLM	100	75.449	Propithecus_coquereli
ENSNGAG00000001275	Blm	80	94.855	ENSPVAG00000011642	BLM	83	94.855	Pteropus_vampyrus
ENSNGAG00000001275	Blm	59	50.594	ENSPNYG00000010956	blm	56	50.597	Pundamilia_nyererei
ENSNGAG00000001275	Blm	76	54.263	ENSPNAG00000011714	blm	80	53.157	Pygocentrus_nattereri
ENSNGAG00000001275	Blm	100	79.560	ENSRNOG00000011213	Blm	100	79.703	Rattus_norvegicus
ENSNGAG00000001275	Blm	100	77.841	ENSRBIG00000029656	BLM	100	86.290	Rhinopithecus_bieti
ENSNGAG00000001275	Blm	100	79.211	ENSRROG00000037871	BLM	92	93.261	Rhinopithecus_roxellana
ENSNGAG00000001275	Blm	91	78.844	ENSSBOG00000030957	BLM	100	78.311	Saimiri_boliviensis_boliviensis
ENSNGAG00000001275	Blm	99	62.091	ENSSHAG00000007988	BLM	99	62.140	Sarcophilus_harrisii
ENSNGAG00000001275	Blm	59	60.545	ENSSFOG00015015462	blm	67	59.977	Scleropages_formosus
ENSNGAG00000001275	Blm	62	62.230	ENSSMAG00000001120	blm	86	62.919	Scophthalmus_maximus
ENSNGAG00000001275	Blm	59	63.353	ENSSDUG00000010955	blm	59	63.560	Seriola_dumerili
ENSNGAG00000001275	Blm	67	62.871	ENSSLDG00000000634	blm	66	63.077	Seriola_lalandi_dorsalis
ENSNGAG00000001275	Blm	90	74.772	ENSSARG00000006398	BLM	95	74.317	Sorex_araneus
ENSNGAG00000001275	Blm	74	58.223	ENSSPUG00000000013	BLM	96	55.097	Sphenodon_punctatus
ENSNGAG00000001275	Blm	100	78.462	ENSSSCG00000001816	BLM	99	79.155	Sus_scrofa
ENSNGAG00000001275	Blm	79	50.518	ENSTGUG00000009959	-	99	50.519	Taeniopygia_guttata
ENSNGAG00000001275	Blm	79	50.783	ENSTRUG00000019860	blm	88	61.962	Takifugu_rubripes
ENSNGAG00000001275	Blm	91	50.522	ENSTNIG00000019246	blm	71	61.058	Tetraodon_nigroviridis
ENSNGAG00000001275	Blm	79	83.270	ENSTBEG00000006706	BLM	81	83.270	Tupaia_belangeri
ENSNGAG00000001275	Blm	100	78.028	ENSTTRG00000016386	BLM	100	79.085	Tursiops_truncatus
ENSNGAG00000001275	Blm	100	77.942	ENSUMAG00000009105	BLM	97	90.287	Ursus_maritimus
ENSNGAG00000001275	Blm	99	76.338	ENSVPAG00000000085	BLM	99	76.761	Vicugna_pacos
ENSNGAG00000001275	Blm	100	76.837	ENSVVUG00000006402	BLM	100	77.377	Vulpes_vulpes
ENSNGAG00000001275	Blm	99	50.402	ENSXETG00000007847	blm	83	72.222	Xenopus_tropicalis
ENSNGAG00000001275	Blm	55	64.433	ENSXMAG00000002951	blm	56	64.562	Xiphophorus_maculatus