EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000001577 (Gene tree)
Gene ID: 103748837
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 65133 bases
Position: chrKL204230.1:50845-115977
Accession: 103748837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002081	La	PF05383.17	2.2e-17	1	1
ENSNGAP00000002065	La	PF05383.17	2.5e-17	1	1
ENSNGAP00000002070	La	PF05383.17	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000002156	-	2127	-	ENSNGAP00000002065	708 (aa)	-	-
ENSNGAT00000002163	-	2253	XM_008851625	ENSNGAP00000002070	709 (aa)	XP_008849847	UPI0004ED3C5B
ENSNGAT00000002178	-	1959	XM_008851627	ENSNGAP00000002081	652 (aa)	XP_008849849	-

Gene Model

Click here to download ENSNGAG00000001577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000001577	-	99	39.597	ENSNGAG00000001750	Larp4b	94	38.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001577	-	100	84.669	ENSG00000161813	LARP4	100	94.400	Homo_sapiens
ENSNGAG00000001577	-	99	45.861	ENSAPOG00000021331	larp4ab	51	60.519	Acanthochromis_polyacanthus
ENSNGAG00000001577	-	99	84.674	ENSAMEG00000001275	LARP4	100	84.349	Ailuropoda_melanoleuca
ENSNGAG00000001577	-	88	67.692	ENSACIG00000001198	larp4aa	94	71.598	Amphilophus_citrinellus
ENSNGAG00000001577	-	99	44.661	ENSAOCG00000006387	larp4ab	51	60.209	Amphiprion_ocellaris
ENSNGAG00000001577	-	51	61.186	ENSAPEG00000015441	larp4ab	98	61.186	Amphiprion_percula
ENSNGAG00000001577	-	99	42.471	ENSATEG00000001018	larp4ab	50	58.355	Anabas_testudineus
ENSNGAG00000001577	-	99	67.718	ENSAPLG00000013661	LARP4	99	68.088	Anas_platyrhynchos
ENSNGAG00000001577	-	99	64.776	ENSACAG00000017133	LARP4	97	63.043	Anolis_carolinensis
ENSNGAG00000001577	-	99	84.977	ENSANAG00000029342	LARP4	97	90.107	Aotus_nancymaae
ENSNGAG00000001577	-	52	55.875	ENSACLG00000000777	larp4ab	99	55.875	Astatotilapia_calliptera
ENSNGAG00000001577	-	99	45.828	ENSAMXG00000001515	larp4ab	95	45.119	Astyanax_mexicanus
ENSNGAG00000001577	-	99	49.671	ENSAMXG00000036493	larp4aa	94	50.198	Astyanax_mexicanus
ENSNGAG00000001577	-	100	82.721	ENSBTAG00000017164	LARP4	100	82.721	Bos_taurus
ENSNGAG00000001577	-	100	83.586	ENSCJAG00000021131	LARP4	97	90.374	Callithrix_jacchus
ENSNGAG00000001577	-	99	85.584	ENSCAFG00000008174	LARP4	100	84.509	Canis_familiaris
ENSNGAG00000001577	-	99	85.584	ENSCAFG00020014554	LARP4	99	87.279	Canis_lupus_dingo
ENSNGAG00000001577	-	100	82.313	ENSCHIG00000025965	LARP4	100	82.313	Capra_hircus
ENSNGAG00000001577	-	100	84.966	ENSTSYG00000004342	LARP4	98	91.176	Carlito_syrichta
ENSNGAG00000001577	-	99	65.678	ENSCAPG00000012942	LARP4	100	64.831	Cavia_aperea
ENSNGAG00000001577	-	100	79.006	ENSCPOG00000020519	LARP4	100	79.006	Cavia_porcellus
ENSNGAG00000001577	-	100	83.287	ENSCCAG00000024439	LARP4	97	90.107	Cebus_capucinus
ENSNGAG00000001577	-	99	83.460	ENSCATG00000044528	LARP4	100	82.893	Cercocebus_atys
ENSNGAG00000001577	-	99	83.934	ENSCLAG00000001829	LARP4	100	83.264	Chinchilla_lanigera
ENSNGAG00000001577	-	59	94.286	ENSCHOG00000010490	-	58	94.286	Choloepus_hoffmanni
ENSNGAG00000001577	-	100	69.168	ENSCPBG00000019407	LARP4	91	69.482	Chrysemys_picta_bellii
ENSNGAG00000001577	-	100	75.728	ENSCANG00000033097	-	100	81.369	Colobus_angolensis_palliatus
ENSNGAG00000001577	-	100	84.828	ENSCANG00000029159	-	97	91.444	Colobus_angolensis_palliatus
ENSNGAG00000001577	-	100	85.437	ENSCGRG00001010818	Larp4	100	85.437	Cricetulus_griseus_chok1gshd
ENSNGAG00000001577	-	99	85.396	ENSCGRG00000009382	Larp4	100	85.315	Cricetulus_griseus_crigri
ENSNGAG00000001577	-	87	73.239	ENSCSEG00000001963	larp4aa	83	64.894	Cynoglossus_semilaevis
ENSNGAG00000001577	-	100	47.012	ENSDARG00000074979	larp4ab	85	78.146	Danio_rerio
ENSNGAG00000001577	-	100	83.724	ENSDNOG00000038525	LARP4	100	83.724	Dasypus_novemcinctus
ENSNGAG00000001577	-	100	83.425	ENSDORG00000004013	Larp4	100	83.425	Dipodomys_ordii
ENSNGAG00000001577	-	73	71.053	ENSETEG00000011683	LARP4	73	71.053	Echinops_telfairi
ENSNGAG00000001577	-	74	40.949	ENSEBUG00000004426	LARP4	64	49.596	Eptatretus_burgeri
ENSNGAG00000001577	-	87	38.284	ENSEBUG00000010394	LARP4	87	38.393	Eptatretus_burgeri
ENSNGAG00000001577	-	100	82.779	ENSEASG00005004356	LARP4	100	91.379	Equus_asinus_asinus
ENSNGAG00000001577	-	100	85.517	ENSECAG00000012479	LARP4	100	85.952	Equus_caballus
ENSNGAG00000001577	-	76	97.436	ENSEEUG00000000316	LARP4	76	97.436	Erinaceus_europaeus
ENSNGAG00000001577	-	99	44.326	ENSELUG00000000395	larp4aa	72	72.464	Esox_lucius
ENSNGAG00000001577	-	73	77.434	ENSELUG00000018650	larp4ab	84	76.087	Esox_lucius
ENSNGAG00000001577	-	100	84.828	ENSFCAG00000031897	LARP4	100	87.108	Felis_catus
ENSNGAG00000001577	-	86	63.738	ENSFALG00000002114	LARP4	98	66.925	Ficedula_albicollis
ENSNGAG00000001577	-	100	83.425	ENSFDAG00000006406	-	100	83.425	Fukomys_damarensis
ENSNGAG00000001577	-	99	42.261	ENSFHEG00000013854	larp4ab	99	42.261	Fundulus_heteroclitus
ENSNGAG00000001577	-	99	48.598	ENSGMOG00000008246	larp4aa	95	48.198	Gadus_morhua
ENSNGAG00000001577	-	95	65.236	ENSGALG00000042122	LARP4	93	66.524	Gallus_gallus
ENSNGAG00000001577	-	99	44.149	ENSGAFG00000021777	larp4ab	99	43.675	Gambusia_affinis
ENSNGAG00000001577	-	99	49.202	ENSGACG00000008381	larp4aa	99	64.865	Gasterosteus_aculeatus
ENSNGAG00000001577	-	99	44.966	ENSGACG00000000680	larp4ab	99	44.667	Gasterosteus_aculeatus
ENSNGAG00000001577	-	100	68.033	ENSGAGG00000006969	LARP4	100	68.349	Gopherus_agassizii
ENSNGAG00000001577	-	99	81.402	ENSGGOG00000015230	LARP4	99	90.836	Gorilla_gorilla
ENSNGAG00000001577	-	52	64.191	ENSHBUG00000023074	larp4aa	50	64.191	Haplochromis_burtoni
ENSNGAG00000001577	-	93	77.796	ENSHGLG00000013875	-	100	76.661	Heterocephalus_glaber_female
ENSNGAG00000001577	-	62	72.406	ENSHGLG00000010979	-	93	74.150	Heterocephalus_glaber_female
ENSNGAG00000001577	-	92	84.139	ENSHGLG00000005513	-	100	84.139	Heterocephalus_glaber_female
ENSNGAG00000001577	-	99	78.393	ENSHGLG00100011678	-	100	77.424	Heterocephalus_glaber_male
ENSNGAG00000001577	-	100	83.516	ENSHGLG00100016984	-	100	83.516	Heterocephalus_glaber_male
ENSNGAG00000001577	-	62	72.406	ENSHGLG00100002832	-	93	74.150	Heterocephalus_glaber_male
ENSNGAG00000001577	-	99	40.473	ENSHCOG00000020857	larp4ab	99	40.342	Hippocampus_comes
ENSNGAG00000001577	-	100	46.038	ENSIPUG00000021659	larp4ab	100	45.144	Ictalurus_punctatus
ENSNGAG00000001577	-	99	46.709	ENSIPUG00000007514	larp4aa	95	46.931	Ictalurus_punctatus
ENSNGAG00000001577	-	100	86.326	ENSSTOG00000003553	LARP4	100	86.326	Ictidomys_tridecemlineatus
ENSNGAG00000001577	-	52	68.817	ENSJJAG00000014649	-	95	88.406	Jaculus_jaculus
ENSNGAG00000001577	-	99	43.963	ENSKMAG00000018556	larp4ab	99	43.850	Kryptolebias_marmoratus
ENSNGAG00000001577	-	99	43.208	ENSLBEG00000019306	larp4ab	100	44.415	Labrus_bergylta
ENSNGAG00000001577	-	99	57.016	ENSLACG00000019090	LARP4	99	55.168	Latimeria_chalumnae
ENSNGAG00000001577	-	99	52.822	ENSLOCG00000007113	larp4ab	95	51.926	Lepisosteus_oculatus
ENSNGAG00000001577	-	100	83.702	ENSLAFG00000005160	LARP4	100	83.702	Loxodonta_africana
ENSNGAG00000001577	-	99	85.736	ENSMFAG00000043681	LARP4	97	91.444	Macaca_fascicularis
ENSNGAG00000001577	-	99	85.736	ENSMMUG00000008172	LARP4	97	91.444	Macaca_mulatta
ENSNGAG00000001577	-	85	81.761	ENSMNEG00000037799	-	92	81.761	Macaca_nemestrina
ENSNGAG00000001577	-	99	85.888	ENSMNEG00000034602	LARP4	100	84.122	Macaca_nemestrina
ENSNGAG00000001577	-	100	85.241	ENSMLEG00000039661	LARP4	97	91.979	Mandrillus_leucophaeus
ENSNGAG00000001577	-	99	44.954	ENSMAMG00000002616	larp4ab	99	45.085	Mastacembelus_armatus
ENSNGAG00000001577	-	52	55.875	ENSMZEG00005007771	larp4ab	99	55.875	Maylandia_zebra
ENSNGAG00000001577	-	94	66.193	ENSMGAG00000010598	LARP4	93	66.237	Meleagris_gallopavo
ENSNGAG00000001577	-	99	80.425	ENSMICG00000030156	-	87	95.714	Microcebus_murinus
ENSNGAG00000001577	-	95	83.994	ENSMICG00000012388	-	96	90.141	Microcebus_murinus
ENSNGAG00000001577	-	100	83.773	ENSMOCG00000020635	Larp4	100	83.773	Microtus_ochrogaster
ENSNGAG00000001577	-	100	42.663	ENSMMOG00000021861	larp4ab	94	54.420	Mola_mola
ENSNGAG00000001577	-	99	48.362	ENSMMOG00000004785	larp4aa	95	47.244	Mola_mola
ENSNGAG00000001577	-	95	74.684	MGP_CAROLIEiJ_G0020281	Larp4	85	91.743	Mus_caroli
ENSNGAG00000001577	-	100	84.327	ENSMUSG00000023025	Larp4	100	84.327	Mus_musculus
ENSNGAG00000001577	-	100	84.882	MGP_PahariEiJ_G0020284	Larp4	100	84.882	Mus_pahari
ENSNGAG00000001577	-	99	84.977	ENSMPUG00000008706	LARP4	96	84.583	Mustela_putorius_furo
ENSNGAG00000001577	-	100	81.293	ENSMLUG00000012513	-	100	81.293	Myotis_lucifugus
ENSNGAG00000001577	-	52	55.703	ENSNBRG00000015675	larp4ab	99	55.703	Neolamprologus_brichardi
ENSNGAG00000001577	-	100	85.083	ENSNLEG00000017798	LARP4	97	91.176	Nomascus_leucogenys
ENSNGAG00000001577	-	66	73.387	ENSOPRG00000004592	-	80	73.387	Ochotona_princeps
ENSNGAG00000001577	-	99	79.818	ENSODEG00000009770	LARP4	100	79.805	Octodon_degus
ENSNGAG00000001577	-	100	43.404	ENSONIG00000019124	larp4ab	100	43.272	Oreochromis_niloticus
ENSNGAG00000001577	-	99	49.647	ENSONIG00000011895	larp4aa	99	48.638	Oreochromis_niloticus
ENSNGAG00000001577	-	72	68.762	ENSOANG00000004373	LARP4	94	70.802	Ornithorhynchus_anatinus
ENSNGAG00000001577	-	100	81.818	ENSOCUG00000026872	-	99	82.271	Oryctolagus_cuniculus
ENSNGAG00000001577	-	100	83.310	ENSOCUG00000021417	-	100	83.310	Oryctolagus_cuniculus
ENSNGAG00000001577	-	99	49.086	ENSORLG00000006758	larp4aa	95	48.037	Oryzias_latipes
ENSNGAG00000001577	-	99	48.695	ENSORLG00020010258	larp4aa	95	47.775	Oryzias_latipes_hni
ENSNGAG00000001577	-	99	48.956	ENSORLG00015002292	larp4aa	95	48.037	Oryzias_latipes_hsok
ENSNGAG00000001577	-	99	49.528	ENSOMEG00000019749	larp4aa	97	66.759	Oryzias_melastigma
ENSNGAG00000001577	-	71	83.721	ENSOGAG00000001415	LARP4	99	83.721	Otolemur_garnettii
ENSNGAG00000001577	-	100	82.016	ENSOARG00000017702	LARP4	99	82.377	Ovis_aries
ENSNGAG00000001577	-	88	90.667	ENSPPAG00000035100	LARP4	97	91.176	Pan_paniscus
ENSNGAG00000001577	-	62	70.640	ENSPPAG00000039122	-	96	74.939	Pan_paniscus
ENSNGAG00000001577	-	100	85.241	ENSPPRG00000004522	LARP4	100	87.108	Panthera_pardus
ENSNGAG00000001577	-	100	85.241	ENSPTIG00000015617	LARP4	100	87.108	Panthera_tigris_altaica
ENSNGAG00000001577	-	100	84.690	ENSPTRG00000004935	LARP4	97	91.444	Pan_troglodytes
ENSNGAG00000001577	-	62	70.759	ENSPTRG00000045907	-	98	77.778	Pan_troglodytes
ENSNGAG00000001577	-	99	85.888	ENSPANG00000022964	LARP4	97	91.444	Papio_anubis
ENSNGAG00000001577	-	99	49.415	ENSPKIG00000005950	larp4ab	100	47.014	Paramormyrops_kingsleyae
ENSNGAG00000001577	-	99	67.616	ENSPSIG00000015867	LARP4	99	66.988	Pelodiscus_sinensis
ENSNGAG00000001577	-	51	55.676	ENSPMGG00000002719	larp4ab	98	56.684	Periophthalmus_magnuspinnatus
ENSNGAG00000001577	-	99	78.225	ENSPEMG00000018433	Larp4	94	83.766	Peromyscus_maniculatus_bairdii
ENSNGAG00000001577	-	100	73.061	ENSPCIG00000000384	LARP4	100	71.662	Phascolarctos_cinereus
ENSNGAG00000001577	-	99	44.340	ENSPFOG00000009764	larp4ab	99	43.995	Poecilia_formosa
ENSNGAG00000001577	-	99	48.870	ENSPFOG00000013148	larp4aa	99	47.832	Poecilia_formosa
ENSNGAG00000001577	-	99	43.600	ENSPLAG00000008502	larp4ab	99	43.717	Poecilia_latipinna
ENSNGAG00000001577	-	99	43.925	ENSPMEG00000002720	larp4ab	99	43.624	Poecilia_mexicana
ENSNGAG00000001577	-	51	59.249	ENSPREG00000016263	larp4ab	99	57.143	Poecilia_reticulata
ENSNGAG00000001577	-	71	87.379	ENSPPYG00000004512	-	100	87.379	Pongo_abelii
ENSNGAG00000001577	-	100	76.737	ENSPCAG00000003671	LARP4	99	76.796	Procavia_capensis
ENSNGAG00000001577	-	87	92.810	ENSPCOG00000026291	LARP4	98	89.572	Propithecus_coquereli
ENSNGAG00000001577	-	99	75.190	ENSPVAG00000016840	LARP4	91	75.262	Pteropus_vampyrus
ENSNGAG00000001577	-	96	48.837	ENSPNAG00000024770	larp4aa	94	49.520	Pygocentrus_nattereri
ENSNGAG00000001577	-	100	47.036	ENSPNAG00000014478	larp4ab	100	47.958	Pygocentrus_nattereri
ENSNGAG00000001577	-	87	94.771	ENSRBIG00000038857	-	97	91.351	Rhinopithecus_bieti
ENSNGAG00000001577	-	89	73.491	ENSRBIG00000036890	-	100	73.491	Rhinopithecus_bieti
ENSNGAG00000001577	-	99	85.888	ENSRROG00000042764	-	97	91.351	Rhinopithecus_roxellana
ENSNGAG00000001577	-	100	74.862	ENSRROG00000025487	-	100	74.862	Rhinopithecus_roxellana
ENSNGAG00000001577	-	99	84.370	ENSSBOG00000026650	LARP4	97	89.572	Saimiri_boliviensis_boliviensis
ENSNGAG00000001577	-	51	82.216	ENSSHAG00000013246	-	99	82.301	Sarcophilus_harrisii
ENSNGAG00000001577	-	100	48.413	ENSSFOG00015003868	larp4aa	100	47.895	Scleropages_formosus
ENSNGAG00000001577	-	100	49.277	ENSSFOG00015014096	larp4ab	100	49.934	Scleropages_formosus
ENSNGAG00000001577	-	97	45.702	ENSSMAG00000002838	larp4ab	99	44.733	Scophthalmus_maximus
ENSNGAG00000001577	-	99	45.191	ENSSDUG00000006655	larp4ab	99	45.632	Seriola_dumerili
ENSNGAG00000001577	-	86	68.038	ENSSDUG00000010621	larp4aa	81	64.595	Seriola_dumerili
ENSNGAG00000001577	-	99	45.971	ENSSLDG00000001791	larp4ab	99	46.144	Seriola_lalandi_dorsalis
ENSNGAG00000001577	-	99	78.907	ENSSARG00000012469	LARP4	100	77.655	Sorex_araneus
ENSNGAG00000001577	-	95	66.381	ENSSPUG00000016552	LARP4	93	66.429	Sphenodon_punctatus
ENSNGAG00000001577	-	99	47.263	ENSSPAG00000007222	larp4aa	98	64.187	Stegastes_partitus
ENSNGAG00000001577	-	99	46.438	ENSSPAG00000002172	larp4ab	99	45.166	Stegastes_partitus
ENSNGAG00000001577	-	100	83.333	ENSSSCG00000028516	LARP4	100	83.710	Sus_scrofa
ENSNGAG00000001577	-	100	64.658	ENSTGUG00000003479	LARP4	100	65.205	Taeniopygia_guttata
ENSNGAG00000001577	-	50	62.222	ENSTRUG00000015939	larp4aa	100	62.222	Takifugu_rubripes
ENSNGAG00000001577	-	99	47.638	ENSTNIG00000015109	larp4aa	50	62.895	Tetraodon_nigroviridis
ENSNGAG00000001577	-	99	44.611	ENSTNIG00000014571	larp4ab	99	44.475	Tetraodon_nigroviridis
ENSNGAG00000001577	-	99	72.838	ENSTBEG00000005167	LARP4	100	72.790	Tupaia_belangeri
ENSNGAG00000001577	-	99	83.460	ENSTTRG00000003764	LARP4	99	82.207	Tursiops_truncatus
ENSNGAG00000001577	-	72	84.586	ENSUAMG00000013764	LARP4	99	89.569	Ursus_americanus
ENSNGAG00000001577	-	100	84.690	ENSUMAG00000008473	LARP4	100	84.828	Ursus_maritimus
ENSNGAG00000001577	-	99	84.337	ENSVPAG00000010136	LARP4	100	82.337	Vicugna_pacos
ENSNGAG00000001577	-	100	84.392	ENSVVUG00000024717	LARP4	97	91.270	Vulpes_vulpes
ENSNGAG00000001577	-	99	57.080	ENSXETG00000007283	larp4	99	56.996	Xenopus_tropicalis
ENSNGAG00000001577	-	52	57.979	ENSXCOG00000019635	larp4ab	98	56.855	Xiphophorus_couchianus
ENSNGAG00000001577	-	99	44.251	ENSXMAG00000002156	larp4ab	99	43.775	Xiphophorus_maculatus