EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000001582 (Gene tree)
Gene ID: 103732821
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 40388 bases
Position: chrKL200463.1:1345792-1386179
Accession: 103732821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002086	POP1	PF06978.11	1.4e-36	1	2
ENSNGAP00000002086	POP1	PF06978.11	1.4e-36	2	2
ENSNGAP00000002086	POPLD	PF08170.12	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000002188	-	3596	XM_008831542	ENSNGAP00000002086	1018 (aa)	XP_008829764	UPI0004ED4A76

Gene Model

Click here to download ENSNGAG00000001582's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG
ngi03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001582	Pop1	100	82.520	ENSG00000104356	POP1	100	90.710	Homo_sapiens
ENSNGAG00000001582	Pop1	100	47.732	ENSAPOG00000008198	pop1	100	47.483	Acanthochromis_polyacanthus
ENSNGAG00000001582	Pop1	100	76.117	ENSAMEG00000000556	POP1	100	76.117	Ailuropoda_melanoleuca
ENSNGAG00000001582	Pop1	90	49.043	ENSACIG00000004169	POP1	93	49.043	Amphilophus_citrinellus
ENSNGAG00000001582	Pop1	100	47.159	ENSAOCG00000010991	pop1	100	46.875	Amphiprion_ocellaris
ENSNGAG00000001582	Pop1	95	45.145	ENSAPEG00000007607	pop1	96	46.771	Amphiprion_percula
ENSNGAG00000001582	Pop1	100	46.573	ENSATEG00000024814	POP1	100	46.742	Anabas_testudineus
ENSNGAG00000001582	Pop1	92	60.906	ENSAPLG00000014418	POP1	100	60.778	Anas_platyrhynchos
ENSNGAG00000001582	Pop1	100	55.309	ENSACAG00000016083	POP1	100	55.416	Anolis_carolinensis
ENSNGAG00000001582	Pop1	88	88.095	ENSANAG00000026360	POP1	99	87.500	Aotus_nancymaae
ENSNGAG00000001582	Pop1	94	52.997	ENSACLG00000010951	pop1	100	47.493	Astatotilapia_calliptera
ENSNGAG00000001582	Pop1	100	45.672	ENSAMXG00000014483	POP1	100	45.580	Astyanax_mexicanus
ENSNGAG00000001582	Pop1	100	76.442	ENSBTAG00000012596	POP1	100	76.442	Bos_taurus
ENSNGAG00000001582	Pop1	100	80.273	ENSCJAG00000015567	POP1	100	80.078	Callithrix_jacchus
ENSNGAG00000001582	Pop1	100	75.977	ENSCAFG00000000469	POP1	100	75.977	Canis_familiaris
ENSNGAG00000001582	Pop1	100	76.953	ENSCAFG00020026765	POP1	100	76.953	Canis_lupus_dingo
ENSNGAG00000001582	Pop1	100	76.465	ENSCHIG00000017066	POP1	100	76.465	Capra_hircus
ENSNGAG00000001582	Pop1	100	80.371	ENSTSYG00000003097	POP1	100	80.371	Carlito_syrichta
ENSNGAG00000001582	Pop1	100	76.362	ENSCAPG00000007251	POP1	100	76.362	Cavia_aperea
ENSNGAG00000001582	Pop1	100	78.767	ENSCPOG00000002901	POP1	100	78.767	Cavia_porcellus
ENSNGAG00000001582	Pop1	100	80.371	ENSCCAG00000018939	POP1	100	80.371	Cebus_capucinus
ENSNGAG00000001582	Pop1	100	81.348	ENSCATG00000040916	POP1	100	81.348	Cercocebus_atys
ENSNGAG00000001582	Pop1	100	80.841	ENSCLAG00000007208	POP1	97	80.841	Chinchilla_lanigera
ENSNGAG00000001582	Pop1	90	81.236	ENSCSAG00000012340	POP1	99	81.236	Chlorocebus_sabaeus
ENSNGAG00000001582	Pop1	95	76.004	ENSCHOG00000011432	POP1	99	76.931	Choloepus_hoffmanni
ENSNGAG00000001582	Pop1	100	63.716	ENSCPBG00000006373	POP1	100	63.327	Chrysemys_picta_bellii
ENSNGAG00000001582	Pop1	82	37.209	ENSCING00000008323	-	89	37.209	Ciona_intestinalis
ENSNGAG00000001582	Pop1	100	81.738	ENSCANG00000001647	POP1	100	81.738	Colobus_angolensis_palliatus
ENSNGAG00000001582	Pop1	100	82.059	ENSCGRG00001017308	Pop1	100	82.059	Cricetulus_griseus_chok1gshd
ENSNGAG00000001582	Pop1	100	76.275	ENSCGRG00000010824	Pop1	100	76.275	Cricetulus_griseus_crigri
ENSNGAG00000001582	Pop1	100	45.385	ENSCSEG00000008737	POP1	100	45.385	Cynoglossus_semilaevis
ENSNGAG00000001582	Pop1	100	46.857	ENSCVAG00000022248	pop1	100	46.364	Cyprinodon_variegatus
ENSNGAG00000001582	Pop1	100	74.929	ENSDNOG00000019974	POP1	100	74.929	Dasypus_novemcinctus
ENSNGAG00000001582	Pop1	100	72.692	ENSDORG00000015384	Pop1	100	72.692	Dipodomys_ordii
ENSNGAG00000001582	Pop1	61	35.008	FBgn0026702	l(1)G0045	73	33.923	Drosophila_melanogaster
ENSNGAG00000001582	Pop1	89	68.772	ENSETEG00000007839	POP1	88	68.772	Echinops_telfairi
ENSNGAG00000001582	Pop1	100	79.883	ENSEASG00005003189	POP1	98	79.883	Equus_asinus_asinus
ENSNGAG00000001582	Pop1	100	79.883	ENSECAG00000024236	POP1	100	79.883	Equus_caballus
ENSNGAG00000001582	Pop1	67	69.604	ENSEEUG00000003050	-	70	69.604	Erinaceus_europaeus
ENSNGAG00000001582	Pop1	100	46.330	ENSELUG00000003526	pop1	100	46.800	Esox_lucius
ENSNGAG00000001582	Pop1	100	79.590	ENSFCAG00000002168	POP1	100	79.590	Felis_catus
ENSNGAG00000001582	Pop1	100	57.992	ENSFALG00000005711	POP1	100	57.992	Ficedula_albicollis
ENSNGAG00000001582	Pop1	100	80.547	ENSFDAG00000017068	POP1	100	80.547	Fukomys_damarensis
ENSNGAG00000001582	Pop1	94	50.959	ENSFHEG00000019518	pop1	100	46.323	Fundulus_heteroclitus
ENSNGAG00000001582	Pop1	93	45.325	ENSGMOG00000000659	POP1	98	45.224	Gadus_morhua
ENSNGAG00000001582	Pop1	100	46.295	ENSGAFG00000019770	POP1	100	46.198	Gambusia_affinis
ENSNGAG00000001582	Pop1	100	44.752	ENSGACG00000003499	pop1	100	44.943	Gasterosteus_aculeatus
ENSNGAG00000001582	Pop1	100	62.162	ENSGAGG00000011737	POP1	98	62.392	Gopherus_agassizii
ENSNGAG00000001582	Pop1	100	82.227	ENSGGOG00000003176	POP1	100	82.227	Gorilla_gorilla
ENSNGAG00000001582	Pop1	100	47.962	ENSHBUG00000021583	pop1	100	47.777	Haplochromis_burtoni
ENSNGAG00000001582	Pop1	100	80.156	ENSHGLG00000006029	POP1	100	80.156	Heterocephalus_glaber_female
ENSNGAG00000001582	Pop1	100	80.156	ENSHGLG00100016879	POP1	100	80.156	Heterocephalus_glaber_male
ENSNGAG00000001582	Pop1	90	49.627	ENSHCOG00000013888	pop1	96	49.303	Hippocampus_comes
ENSNGAG00000001582	Pop1	100	45.064	ENSIPUG00000018336	pop1	91	62.195	Ictalurus_punctatus
ENSNGAG00000001582	Pop1	100	82.991	ENSSTOG00000011455	POP1	97	82.991	Ictidomys_tridecemlineatus
ENSNGAG00000001582	Pop1	100	79.686	ENSJJAG00000013325	Pop1	100	79.686	Jaculus_jaculus
ENSNGAG00000001582	Pop1	100	46.654	ENSKMAG00000001346	POP1	100	46.449	Kryptolebias_marmoratus
ENSNGAG00000001582	Pop1	81	53.431	ENSLBEG00000024457	POP1	91	53.016	Labrus_bergylta
ENSNGAG00000001582	Pop1	93	55.141	ENSLACG00000012498	POP1	99	54.692	Latimeria_chalumnae
ENSNGAG00000001582	Pop1	100	50.579	ENSLOCG00000009817	POP1	100	50.774	Lepisosteus_oculatus
ENSNGAG00000001582	Pop1	100	79.767	ENSLAFG00000010770	POP1	100	79.767	Loxodonta_africana
ENSNGAG00000001582	Pop1	100	81.348	ENSMFAG00000000347	POP1	100	81.348	Macaca_fascicularis
ENSNGAG00000001582	Pop1	100	81.152	ENSMNEG00000036870	POP1	100	81.152	Macaca_nemestrina
ENSNGAG00000001582	Pop1	100	81.152	ENSMLEG00000034986	POP1	100	81.152	Mandrillus_leucophaeus
ENSNGAG00000001582	Pop1	100	46.837	ENSMAMG00000004040	pop1	100	46.931	Mastacembelus_armatus
ENSNGAG00000001582	Pop1	100	47.867	ENSMZEG00005025448	pop1	100	47.682	Maylandia_zebra
ENSNGAG00000001582	Pop1	100	56.600	ENSMGAG00000012167	POP1	100	56.736	Meleagris_gallopavo
ENSNGAG00000001582	Pop1	100	81.176	ENSMAUG00000017537	Pop1	100	80.784	Mesocricetus_auratus
ENSNGAG00000001582	Pop1	100	82.617	ENSMICG00000004361	POP1	100	82.617	Microcebus_murinus
ENSNGAG00000001582	Pop1	100	80.943	ENSMOCG00000006356	Pop1	100	81.238	Microtus_ochrogaster
ENSNGAG00000001582	Pop1	100	43.065	ENSMMOG00000018242	pop1	100	43.065	Mola_mola
ENSNGAG00000001582	Pop1	100	66.246	ENSMODG00000006561	POP1	100	66.279	Monodelphis_domestica
ENSNGAG00000001582	Pop1	92	51.907	ENSMALG00000012621	POP1	100	47.343	Monopterus_albus
ENSNGAG00000001582	Pop1	100	81.747	MGP_CAROLIEiJ_G0019726	Pop1	100	81.747	Mus_caroli
ENSNGAG00000001582	Pop1	100	82.336	ENSMUSG00000022325	Pop1	100	82.336	Mus_musculus
ENSNGAG00000001582	Pop1	100	81.158	MGP_PahariEiJ_G0019735	Pop1	100	81.158	Mus_pahari
ENSNGAG00000001582	Pop1	100	81.845	MGP_SPRETEiJ_G0020622	Pop1	100	81.845	Mus_spretus
ENSNGAG00000001582	Pop1	100	77.237	ENSMPUG00000015250	POP1	100	77.237	Mustela_putorius_furo
ENSNGAG00000001582	Pop1	100	74.464	ENSMLUG00000010204	POP1	100	74.464	Myotis_lucifugus
ENSNGAG00000001582	Pop1	89	48.605	ENSNBRG00000002356	pop1	99	47.475	Neolamprologus_brichardi
ENSNGAG00000001582	Pop1	100	81.641	ENSNLEG00000002541	POP1	100	81.641	Nomascus_leucogenys
ENSNGAG00000001582	Pop1	95	58.214	ENSMEUG00000003118	POP1	98	58.707	Notamacropus_eugenii
ENSNGAG00000001582	Pop1	100	76.125	ENSOPRG00000007667	POP1	100	76.125	Ochotona_princeps
ENSNGAG00000001582	Pop1	100	78.244	ENSODEG00000003984	POP1	100	78.244	Octodon_degus
ENSNGAG00000001582	Pop1	100	48.802	ENSONIG00000016445	pop1	100	48.335	Oreochromis_niloticus
ENSNGAG00000001582	Pop1	60	70.122	ENSOANG00000001278	-	94	68.902	Ornithorhynchus_anatinus
ENSNGAG00000001582	Pop1	100	77.648	ENSOCUG00000017400	POP1	100	77.648	Oryctolagus_cuniculus
ENSNGAG00000001582	Pop1	100	46.332	ENSORLG00000002839	pop1	100	46.525	Oryzias_latipes
ENSNGAG00000001582	Pop1	90	48.291	ENSORLG00020022450	POP1	96	48.562	Oryzias_latipes_hni
ENSNGAG00000001582	Pop1	100	46.815	ENSORLG00015012746	POP1	100	46.911	Oryzias_latipes_hsok
ENSNGAG00000001582	Pop1	100	47.133	ENSOMEG00000006915	pop1	99	46.647	Oryzias_melastigma
ENSNGAG00000001582	Pop1	100	79.688	ENSOGAG00000001466	POP1	100	79.688	Otolemur_garnettii
ENSNGAG00000001582	Pop1	100	82.324	ENSPPAG00000018410	POP1	100	82.324	Pan_paniscus
ENSNGAG00000001582	Pop1	100	79.317	ENSPPRG00000005002	POP1	100	79.317	Panthera_pardus
ENSNGAG00000001582	Pop1	100	79.512	ENSPTIG00000016527	POP1	100	79.512	Panthera_tigris_altaica
ENSNGAG00000001582	Pop1	100	82.227	ENSPTRG00000020458	POP1	100	82.227	Pan_troglodytes
ENSNGAG00000001582	Pop1	100	81.152	ENSPANG00000009704	POP1	100	81.152	Papio_anubis
ENSNGAG00000001582	Pop1	100	49.567	ENSPKIG00000016325	POP1	100	49.422	Paramormyrops_kingsleyae
ENSNGAG00000001582	Pop1	100	61.397	ENSPSIG00000012343	POP1	100	61.397	Pelodiscus_sinensis
ENSNGAG00000001582	Pop1	90	48.822	ENSPMGG00000022253	POP1	95	49.626	Periophthalmus_magnuspinnatus
ENSNGAG00000001582	Pop1	99	80.481	ENSPEMG00000023633	Pop1	100	80.481	Peromyscus_maniculatus_bairdii
ENSNGAG00000001582	Pop1	90	43.246	ENSPMAG00000003209	POP1	100	43.665	Petromyzon_marinus
ENSNGAG00000001582	Pop1	100	66.085	ENSPCIG00000012216	POP1	100	66.085	Phascolarctos_cinereus
ENSNGAG00000001582	Pop1	100	46.794	ENSPFOG00000012490	POP1	100	46.456	Poecilia_formosa
ENSNGAG00000001582	Pop1	100	46.405	ENSPLAG00000004646	POP1	100	46.169	Poecilia_latipinna
ENSNGAG00000001582	Pop1	100	46.890	ENSPMEG00000019592	POP1	100	46.571	Poecilia_mexicana
ENSNGAG00000001582	Pop1	100	46.264	ENSPREG00000020951	POP1	100	46.169	Poecilia_reticulata
ENSNGAG00000001582	Pop1	100	82.031	ENSPPYG00000018777	POP1	100	82.031	Pongo_abelii
ENSNGAG00000001582	Pop1	100	73.926	ENSPCAG00000016662	POP1	100	73.926	Procavia_capensis
ENSNGAG00000001582	Pop1	100	82.227	ENSPCOG00000019420	POP1	100	82.227	Propithecus_coquereli
ENSNGAG00000001582	Pop1	100	78.537	ENSPVAG00000014468	POP1	100	78.537	Pteropus_vampyrus
ENSNGAG00000001582	Pop1	89	48.918	ENSPNYG00000004476	pop1	99	47.667	Pundamilia_nyererei
ENSNGAG00000001582	Pop1	100	45.253	ENSPNAG00000000265	pop1	100	42.686	Pygocentrus_nattereri
ENSNGAG00000001582	Pop1	100	82.826	ENSRNOG00000005243	Pop1	100	82.728	Rattus_norvegicus
ENSNGAG00000001582	Pop1	100	81.445	ENSRBIG00000007996	POP1	100	81.445	Rhinopithecus_bieti
ENSNGAG00000001582	Pop1	100	81.641	ENSRROG00000012334	POP1	100	81.641	Rhinopithecus_roxellana
ENSNGAG00000001582	Pop1	99	81.324	ENSSBOG00000020830	POP1	100	81.324	Saimiri_boliviensis_boliviensis
ENSNGAG00000001582	Pop1	100	65.988	ENSSHAG00000000296	POP1	100	65.858	Sarcophilus_harrisii
ENSNGAG00000001582	Pop1	100	47.560	ENSSFOG00015007429	pop1	99	47.098	Scleropages_formosus
ENSNGAG00000001582	Pop1	86	51.767	ENSSMAG00000010467	POP1	98	47.150	Scophthalmus_maximus
ENSNGAG00000001582	Pop1	100	47.025	ENSSDUG00000007817	POP1	100	47.147	Seriola_dumerili
ENSNGAG00000001582	Pop1	100	47.025	ENSSLDG00000012565	POP1	100	47.053	Seriola_lalandi_dorsalis
ENSNGAG00000001582	Pop1	100	58.212	ENSSPUG00000003550	-	100	58.212	Sphenodon_punctatus
ENSNGAG00000001582	Pop1	100	46.563	ENSSPAG00000014955	pop1	99	47.808	Stegastes_partitus
ENSNGAG00000001582	Pop1	100	77.233	ENSSSCG00000006078	POP1	100	77.233	Sus_scrofa
ENSNGAG00000001582	Pop1	92	55.180	ENSTGUG00000012011	-	100	55.391	Taeniopygia_guttata
ENSNGAG00000001582	Pop1	91	47.558	ENSTRUG00000010856	pop1	94	47.240	Takifugu_rubripes
ENSNGAG00000001582	Pop1	93	47.374	ENSTNIG00000013297	pop1	99	47.385	Tetraodon_nigroviridis
ENSNGAG00000001582	Pop1	95	76.639	ENSTBEG00000014214	POP1	99	76.639	Tupaia_belangeri
ENSNGAG00000001582	Pop1	100	76.855	ENSTTRG00000016071	POP1	100	76.855	Tursiops_truncatus
ENSNGAG00000001582	Pop1	99	73.741	ENSUAMG00000017309	POP1	100	73.741	Ursus_americanus
ENSNGAG00000001582	Pop1	91	89.069	ENSUMAG00000016952	POP1	100	89.069	Ursus_maritimus
ENSNGAG00000001582	Pop1	82	86.861	ENSVPAG00000008278	POP1	82	86.861	Vicugna_pacos
ENSNGAG00000001582	Pop1	100	77.148	ENSVVUG00000010994	POP1	100	77.148	Vulpes_vulpes
ENSNGAG00000001582	Pop1	100	42.241	ENSXCOG00000017043	POP1	100	42.120	Xiphophorus_couchianus
ENSNGAG00000001582	Pop1	100	46.538	ENSXMAG00000002472	POP1	100	45.837	Xiphophorus_maculatus