EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000001905 (Gene tree)
Gene ID: 103736467
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 71562 bases
Position: chrKL201315.1:4271739-4343300
Accession: 103736467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002281	Npa1	PF11707.8	1.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000002530	-	7155	XM_008835980	ENSNGAP00000002281	2263 (aa)	XP_008834202	-

Gene Model

Click here to download ENSNGAG00000001905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000001905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000001905	Urb1	99	77.910	ENSG00000142207	URB1	99	77.905	Homo_sapiens
ENSNGAG00000001905	Urb1	95	47.096	ENSAPOG00000020308	urb1	98	47.096	Acanthochromis_polyacanthus
ENSNGAG00000001905	Urb1	99	74.307	ENSAMEG00000011998	URB1	99	74.483	Ailuropoda_melanoleuca
ENSNGAG00000001905	Urb1	95	43.747	ENSACIG00000003248	urb1	97	43.839	Amphilophus_citrinellus
ENSNGAG00000001905	Urb1	99	40.352	ENSAOCG00000010364	urb1	99	40.352	Amphiprion_ocellaris
ENSNGAG00000001905	Urb1	96	51.435	ENSAPEG00000010758	urb1	99	51.435	Amphiprion_percula
ENSNGAG00000001905	Urb1	98	43.268	ENSATEG00000011790	urb1	97	43.268	Anabas_testudineus
ENSNGAG00000001905	Urb1	97	54.320	ENSAPLG00000012791	URB1	100	54.320	Anas_platyrhynchos
ENSNGAG00000001905	Urb1	99	51.309	ENSACAG00000002817	URB1	99	51.396	Anolis_carolinensis
ENSNGAG00000001905	Urb1	99	77.509	ENSANAG00000024617	URB1	99	77.509	Aotus_nancymaae
ENSNGAG00000001905	Urb1	98	43.977	ENSACLG00000024865	urb1	99	43.747	Astatotilapia_calliptera
ENSNGAG00000001905	Urb1	99	39.444	ENSAMXG00000012306	urb1	99	39.232	Astyanax_mexicanus
ENSNGAG00000001905	Urb1	99	71.197	ENSBTAG00000012412	URB1	99	71.209	Bos_taurus
ENSNGAG00000001905	Urb1	99	77.011	ENSCJAG00000009118	URB1	99	77.011	Callithrix_jacchus
ENSNGAG00000001905	Urb1	99	75.175	ENSCAFG00000008892	URB1	99	75.175	Canis_familiaris
ENSNGAG00000001905	Urb1	99	73.779	ENSCAFG00020025994	-	99	73.735	Canis_lupus_dingo
ENSNGAG00000001905	Urb1	99	74.879	ENSCAFG00020025987	-	99	74.879	Canis_lupus_dingo
ENSNGAG00000001905	Urb1	99	70.978	ENSCHIG00000015645	URB1	99	70.978	Capra_hircus
ENSNGAG00000001905	Urb1	99	76.696	ENSTSYG00000013286	URB1	99	76.696	Carlito_syrichta
ENSNGAG00000001905	Urb1	98	75.113	ENSCAPG00000015589	URB1	99	75.113	Cavia_aperea
ENSNGAG00000001905	Urb1	99	75.991	ENSCPOG00000006748	URB1	99	75.991	Cavia_porcellus
ENSNGAG00000001905	Urb1	99	77.832	ENSCCAG00000021299	URB1	99	77.832	Cebus_capucinus
ENSNGAG00000001905	Urb1	99	77.367	ENSCATG00000042630	URB1	99	77.411	Cercocebus_atys
ENSNGAG00000001905	Urb1	99	77.004	ENSCLAG00000005262	URB1	99	77.004	Chinchilla_lanigera
ENSNGAG00000001905	Urb1	99	75.909	ENSCSAG00000009584	URB1	99	75.953	Chlorocebus_sabaeus
ENSNGAG00000001905	Urb1	99	56.670	ENSCPBG00000006454	URB1	99	56.757	Chrysemys_picta_bellii
ENSNGAG00000001905	Urb1	99	77.323	ENSCANG00000031088	URB1	99	77.367	Colobus_angolensis_palliatus
ENSNGAG00000001905	Urb1	98	79.403	ENSCGRG00001010616	Urb1	99	79.049	Cricetulus_griseus_chok1gshd
ENSNGAG00000001905	Urb1	98	79.127	ENSCGRG00000015840	Urb1	99	79.127	Cricetulus_griseus_crigri
ENSNGAG00000001905	Urb1	96	49.133	ENSCSEG00000012616	urb1	99	49.133	Cynoglossus_semilaevis
ENSNGAG00000001905	Urb1	91	55.372	ENSCVAG00000009076	urb1	96	55.372	Cyprinodon_variegatus
ENSNGAG00000001905	Urb1	99	43.198	ENSDARG00000060308	urb1	99	43.507	Danio_rerio
ENSNGAG00000001905	Urb1	85	73.785	ENSDNOG00000015586	URB1	99	73.785	Dasypus_novemcinctus
ENSNGAG00000001905	Urb1	99	77.445	ENSDORG00000006735	Urb1	99	77.445	Dipodomys_ordii
ENSNGAG00000001905	Urb1	92	75.926	ENSETEG00000009080	URB1	92	75.926	Echinops_telfairi
ENSNGAG00000001905	Urb1	99	74.483	ENSEASG00005007711	URB1	99	74.483	Equus_asinus_asinus
ENSNGAG00000001905	Urb1	96	82.893	ENSECAG00000013206	URB1	99	82.893	Equus_caballus
ENSNGAG00000001905	Urb1	57	82.573	ENSEEUG00000003626	-	57	82.573	Erinaceus_europaeus
ENSNGAG00000001905	Urb1	97	44.211	ENSELUG00000020516	urb1	97	44.122	Esox_lucius
ENSNGAG00000001905	Urb1	99	73.624	ENSFCAG00000002177	URB1	99	73.624	Felis_catus
ENSNGAG00000001905	Urb1	98	48.960	ENSFALG00000004636	URB1	99	49.093	Ficedula_albicollis
ENSNGAG00000001905	Urb1	99	76.727	ENSFDAG00000007288	URB1	95	76.727	Fukomys_damarensis
ENSNGAG00000001905	Urb1	99	40.809	ENSFHEG00000000202	urb1	99	41.725	Fundulus_heteroclitus
ENSNGAG00000001905	Urb1	91	46.394	ENSGMOG00000001838	urb1	93	46.394	Gadus_morhua
ENSNGAG00000001905	Urb1	99	54.478	ENSGALG00000015887	URB1	99	54.478	Gallus_gallus
ENSNGAG00000001905	Urb1	94	52.448	ENSGAFG00000020694	urb1	98	52.448	Gambusia_affinis
ENSNGAG00000001905	Urb1	99	43.791	ENSGACG00000011703	urb1	99	43.791	Gasterosteus_aculeatus
ENSNGAG00000001905	Urb1	99	56.005	ENSGAGG00000022544	URB1	99	56.005	Gopherus_agassizii
ENSNGAG00000001905	Urb1	99	77.807	ENSGGOG00000000285	URB1	99	77.807	Gorilla_gorilla
ENSNGAG00000001905	Urb1	98	43.888	ENSHBUG00000001904	urb1	99	43.659	Haplochromis_burtoni
ENSNGAG00000001905	Urb1	99	75.554	ENSHGLG00000004907	URB1	99	75.554	Heterocephalus_glaber_female
ENSNGAG00000001905	Urb1	99	76.111	ENSHGLG00100010749	URB1	99	76.111	Heterocephalus_glaber_male
ENSNGAG00000001905	Urb1	71	48.219	ENSHCOG00000018683	urb1	96	48.575	Hippocampus_comes
ENSNGAG00000001905	Urb1	99	39.636	ENSIPUG00000014721	urb1	99	39.671	Ictalurus_punctatus
ENSNGAG00000001905	Urb1	99	78.040	ENSSTOG00000004539	URB1	99	77.905	Ictidomys_tridecemlineatus
ENSNGAG00000001905	Urb1	99	45.593	ENSKMAG00000006001	urb1	98	47.510	Kryptolebias_marmoratus
ENSNGAG00000001905	Urb1	93	50.107	ENSLBEG00000027208	urb1	98	50.107	Labrus_bergylta
ENSNGAG00000001905	Urb1	99	46.695	ENSLACG00000017059	URB1	99	46.652	Latimeria_chalumnae
ENSNGAG00000001905	Urb1	99	45.056	ENSLOCG00000009190	urb1	99	45.056	Lepisosteus_oculatus
ENSNGAG00000001905	Urb1	99	72.107	ENSLAFG00000010407	URB1	99	72.107	Loxodonta_africana
ENSNGAG00000001905	Urb1	99	77.147	ENSMFAG00000034391	URB1	96	77.191	Macaca_fascicularis
ENSNGAG00000001905	Urb1	99	77.103	ENSMMUG00000010295	URB1	99	77.147	Macaca_mulatta
ENSNGAG00000001905	Urb1	99	75.738	ENSMNEG00000032981	URB1	99	75.782	Macaca_nemestrina
ENSNGAG00000001905	Urb1	99	77.411	ENSMLEG00000041435	URB1	99	77.455	Mandrillus_leucophaeus
ENSNGAG00000001905	Urb1	99	42.016	ENSMAMG00000011238	urb1	99	41.947	Mastacembelus_armatus
ENSNGAG00000001905	Urb1	98	41.504	ENSMZEG00005011862	urb1	99	39.510	Maylandia_zebra
ENSNGAG00000001905	Urb1	98	54.671	ENSMGAG00000014512	URB1	99	54.671	Meleagris_gallopavo
ENSNGAG00000001905	Urb1	93	79.638	ENSMAUG00000010516	Urb1	99	78.832	Mesocricetus_auratus
ENSNGAG00000001905	Urb1	99	76.178	ENSMICG00000016424	URB1	99	76.178	Microcebus_murinus
ENSNGAG00000001905	Urb1	99	77.221	ENSMOCG00000012613	Urb1	99	77.221	Microtus_ochrogaster
ENSNGAG00000001905	Urb1	99	61.636	ENSMODG00000021076	URB1	99	61.636	Monodelphis_domestica
ENSNGAG00000001905	Urb1	98	42.316	ENSMALG00000017411	urb1	99	51.876	Monopterus_albus
ENSNGAG00000001905	Urb1	100	77.251	MGP_CAROLIEiJ_G0020948	Urb1	99	77.251	Mus_caroli
ENSNGAG00000001905	Urb1	100	77.602	ENSMUSG00000039929	Urb1	99	77.602	Mus_musculus
ENSNGAG00000001905	Urb1	100	77.997	MGP_PahariEiJ_G0016653	Urb1	99	78.041	Mus_pahari
ENSNGAG00000001905	Urb1	100	77.558	MGP_SPRETEiJ_G0021854	Urb1	99	77.602	Mus_spretus
ENSNGAG00000001905	Urb1	99	73.624	ENSMPUG00000001123	URB1	99	73.624	Mustela_putorius_furo
ENSNGAG00000001905	Urb1	81	44.906	ENSNBRG00000001049	urb1	99	44.899	Neolamprologus_brichardi
ENSNGAG00000001905	Urb1	99	75.739	ENSNLEG00000026872	URB1	99	75.738	Nomascus_leucogenys
ENSNGAG00000001905	Urb1	96	58.141	ENSMEUG00000010828	URB1	96	58.205	Notamacropus_eugenii
ENSNGAG00000001905	Urb1	99	69.261	ENSOPRG00000013482	URB1	99	69.261	Ochotona_princeps
ENSNGAG00000001905	Urb1	99	75.903	ENSODEG00000002587	URB1	99	75.903	Octodon_degus
ENSNGAG00000001905	Urb1	99	43.928	ENSONIG00000005599	urb1	99	43.928	Oreochromis_niloticus
ENSNGAG00000001905	Urb1	99	74.835	ENSOCUG00000009381	URB1	99	74.835	Oryctolagus_cuniculus
ENSNGAG00000001905	Urb1	99	42.433	ENSORLG00000003429	urb1	99	42.433	Oryzias_latipes
ENSNGAG00000001905	Urb1	99	42.509	ENSORLG00020013785	urb1	99	42.509	Oryzias_latipes_hni
ENSNGAG00000001905	Urb1	99	46.049	ENSORLG00015019421	urb1	99	46.049	Oryzias_latipes_hsok
ENSNGAG00000001905	Urb1	77	51.737	ENSOMEG00000002094	urb1	98	50.898	Oryzias_melastigma
ENSNGAG00000001905	Urb1	99	76.509	ENSOGAG00000017140	URB1	99	76.642	Otolemur_garnettii
ENSNGAG00000001905	Urb1	95	71.713	ENSOARG00000013679	URB1	99	71.429	Ovis_aries
ENSNGAG00000001905	Urb1	99	77.983	ENSPPAG00000003423	URB1	99	77.983	Pan_paniscus
ENSNGAG00000001905	Urb1	99	74.240	ENSPPRG00000023131	URB1	99	74.240	Panthera_pardus
ENSNGAG00000001905	Urb1	93	73.081	ENSPTIG00000016125	URB1	98	73.081	Panthera_tigris_altaica
ENSNGAG00000001905	Urb1	99	77.851	ENSPTRG00000013852	URB1	99	77.851	Pan_troglodytes
ENSNGAG00000001905	Urb1	99	77.411	ENSPANG00000021964	URB1	99	77.455	Papio_anubis
ENSNGAG00000001905	Urb1	98	44.027	ENSPKIG00000003683	urb1	98	43.988	Paramormyrops_kingsleyae
ENSNGAG00000001905	Urb1	99	78.502	ENSPEMG00000021205	Urb1	99	78.502	Peromyscus_maniculatus_bairdii
ENSNGAG00000001905	Urb1	77	33.624	ENSPMAG00000009733	URB1	100	33.020	Petromyzon_marinus
ENSNGAG00000001905	Urb1	99	61.111	ENSPCIG00000016350	URB1	99	61.311	Phascolarctos_cinereus
ENSNGAG00000001905	Urb1	96	42.767	ENSPLAG00000004371	urb1	99	42.767	Poecilia_latipinna
ENSNGAG00000001905	Urb1	99	43.109	ENSPMEG00000006634	urb1	99	43.065	Poecilia_mexicana
ENSNGAG00000001905	Urb1	99	43.014	ENSPREG00000013453	urb1	99	43.014	Poecilia_reticulata
ENSNGAG00000001905	Urb1	99	77.283	ENSPPYG00000011359	URB1	99	77.279	Pongo_abelii
ENSNGAG00000001905	Urb1	99	63.019	ENSPCAG00000007430	URB1	99	63.019	Procavia_capensis
ENSNGAG00000001905	Urb1	99	77.093	ENSPCOG00000022695	URB1	99	77.093	Propithecus_coquereli
ENSNGAG00000001905	Urb1	99	73.712	ENSPVAG00000000889	URB1	99	73.712	Pteropus_vampyrus
ENSNGAG00000001905	Urb1	98	42.616	ENSPNYG00000010589	urb1	99	42.399	Pundamilia_nyererei
ENSNGAG00000001905	Urb1	99	39.458	ENSPNAG00000019324	urb1	99	39.799	Pygocentrus_nattereri
ENSNGAG00000001905	Urb1	100	77.612	ENSRNOG00000002080	Urb1	99	77.788	Rattus_norvegicus
ENSNGAG00000001905	Urb1	99	77.103	ENSRBIG00000033122	URB1	99	77.103	Rhinopithecus_bieti
ENSNGAG00000001905	Urb1	99	77.279	ENSRROG00000040237	URB1	99	77.279	Rhinopithecus_roxellana
ENSNGAG00000001905	Urb1	99	77.641	ENSSBOG00000027672	URB1	99	77.641	Saimiri_boliviensis_boliviensis
ENSNGAG00000001905	Urb1	99	61.726	ENSSHAG00000005140	URB1	100	61.622	Sarcophilus_harrisii
ENSNGAG00000001905	Urb1	91	45.995	ENSSFOG00015000339	urb1	98	45.991	Scleropages_formosus
ENSNGAG00000001905	Urb1	99	42.250	ENSSMAG00000003782	urb1	99	42.601	Scophthalmus_maximus
ENSNGAG00000001905	Urb1	99	43.851	ENSSDUG00000012313	urb1	99	43.851	Seriola_dumerili
ENSNGAG00000001905	Urb1	99	43.769	ENSSLDG00000023179	urb1	99	43.769	Seriola_lalandi_dorsalis
ENSNGAG00000001905	Urb1	99	53.151	ENSSPUG00000012447	URB1	99	53.374	Sphenodon_punctatus
ENSNGAG00000001905	Urb1	96	52.000	ENSSPAG00000006325	urb1	99	52.000	Stegastes_partitus
ENSNGAG00000001905	Urb1	99	72.823	ENSSSCG00000032024	URB1	99	72.823	Sus_scrofa
ENSNGAG00000001905	Urb1	73	56.052	ENSTGUG00000013442	URB1	100	56.052	Taeniopygia_guttata
ENSNGAG00000001905	Urb1	99	43.306	ENSTRUG00000009372	urb1	99	43.125	Takifugu_rubripes
ENSNGAG00000001905	Urb1	99	42.267	ENSTNIG00000016277	urb1	99	42.267	Tetraodon_nigroviridis
ENSNGAG00000001905	Urb1	81	77.457	ENSTBEG00000010044	URB1	81	77.457	Tupaia_belangeri
ENSNGAG00000001905	Urb1	90	73.354	ENSTTRG00000007712	URB1	92	73.563	Tursiops_truncatus
ENSNGAG00000001905	Urb1	99	73.911	ENSUAMG00000012231	URB1	99	73.911	Ursus_americanus
ENSNGAG00000001905	Urb1	93	74.365	ENSUMAG00000017419	URB1	99	74.414	Ursus_maritimus
ENSNGAG00000001905	Urb1	68	84.354	ENSVPAG00000001164	URB1	68	84.354	Vicugna_pacos
ENSNGAG00000001905	Urb1	99	74.549	ENSVVUG00000000551	URB1	99	74.549	Vulpes_vulpes
ENSNGAG00000001905	Urb1	99	48.386	ENSXETG00000009895	urb1	99	48.429	Xenopus_tropicalis
ENSNGAG00000001905	Urb1	99	40.618	ENSXCOG00000005500	urb1	99	40.618	Xiphophorus_couchianus
ENSNGAG00000001905	Urb1	99	40.600	ENSXMAG00000007253	urb1	99	40.600	Xiphophorus_maculatus