EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000002378 (Gene tree)
Gene ID: 103732564
Gene Symbol: Pum1
Alias: Pumm
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 126698 bases
Position: chrKL200366.1:587489-714186
Accession: 103732564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	1	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	2	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	3	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	4	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	5	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	6	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	7	8
ENSNGAP00000002683	PUF	PF00806.19	1.6e-70	8	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	1	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	2	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	3	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	4	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	5	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	6	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	7	8
ENSNGAP00000002698	PUF	PF00806.19	1.4e-69	8	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	1	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	2	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	3	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	4	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	5	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	6	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	7	8
ENSNGAP00000002669	PUF	PF00806.19	3e-69	8	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	1	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	2	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	3	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	4	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	5	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	6	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	7	8
ENSNGAP00000002677	PUF	PF00806.19	3.1e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000003299	-	5468	-	ENSNGAP00000002677	1189 (aa)	-	UPI0004ED161E
ENSNGAT00000003285	-	5595	XM_008831154	ENSNGAP00000002669	1188 (aa)	XP_008829376	UPI0004ED0D29
ENSNGAT00000003333	-	3279	XM_008831161	ENSNGAP00000002698	1092 (aa)	XP_008829383	UPI0004ED05F3
ENSNGAT00000003312	-	4733	XM_008831164	ENSNGAP00000002683	944 (aa)	XP_008829386	UPI0004ED0491

Gene Model

Click here to download ENSNGAG00000002378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000002378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000002378	Pum1	89	77.138	ENSNGAG00000016665	-	100	77.045
ENSNGAG00000002378	Pum1	89	52.651	ENSNGAG00000016239	-	99	54.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000002378	Pum1	100	99.376	ENSG00000134644	PUM1	100	99.364	Homo_sapiens
ENSNGAG00000002378	Pum1	90	91.325	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSNGAG00000002378	Pum1	100	99.244	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSNGAG00000002378	Pum1	100	81.312	ENSACIG00000021013	pum1	100	76.680	Amphilophus_citrinellus
ENSNGAG00000002378	Pum1	90	91.325	ENSAOCG00000003944	pum1	100	77.413	Amphiprion_ocellaris
ENSNGAG00000002378	Pum1	90	91.325	ENSAPEG00000014550	pum1	100	77.413	Amphiprion_percula
ENSNGAG00000002378	Pum1	100	81.312	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSNGAG00000002378	Pum1	100	97.886	ENSAPLG00000009351	PUM1	100	97.309	Anas_platyrhynchos
ENSNGAG00000002378	Pum1	100	96.264	ENSACAG00000000682	PUM1	98	95.539	Anolis_carolinensis
ENSNGAG00000002378	Pum1	100	99.364	ENSANAG00000027865	PUM1	100	99.364	Aotus_nancymaae
ENSNGAG00000002378	Pum1	90	76.645	ENSACLG00000019354	pum1	100	78.908	Astatotilapia_calliptera
ENSNGAG00000002378	Pum1	100	84.491	ENSAMXG00000020607	pum1	96	78.930	Astyanax_mexicanus
ENSNGAG00000002378	Pum1	100	99.251	ENSBTAG00000018979	PUM1	100	99.275	Bos_taurus
ENSNGAG00000002378	Pum1	100	99.364	ENSCJAG00000006035	PUM1	100	99.364	Callithrix_jacchus
ENSNGAG00000002378	Pum1	100	98.611	ENSCAFG00000011205	PUM1	100	97.056	Canis_familiaris
ENSNGAG00000002378	Pum1	92	97.361	ENSCAFG00020024616	PUM1	99	98.767	Canis_lupus_dingo
ENSNGAG00000002378	Pum1	100	99.251	ENSCHIG00000012952	PUM1	100	99.074	Capra_hircus
ENSNGAG00000002378	Pum1	100	99.047	ENSTSYG00000008868	PUM1	100	99.047	Carlito_syrichta
ENSNGAG00000002378	Pum1	100	99.258	ENSCPOG00000031613	PUM1	100	99.258	Cavia_porcellus
ENSNGAG00000002378	Pum1	100	99.364	ENSCATG00000017991	PUM1	100	99.517	Cercocebus_atys
ENSNGAG00000002378	Pum1	100	99.258	ENSCLAG00000007662	PUM1	100	99.517	Chinchilla_lanigera
ENSNGAG00000002378	Pum1	100	98.611	ENSCSAG00000001028	PUM1	100	98.417	Chlorocebus_sabaeus
ENSNGAG00000002378	Pum1	92	98.611	ENSCHOG00000010245	PUM1	93	95.971	Choloepus_hoffmanni
ENSNGAG00000002378	Pum1	100	97.634	ENSCPBG00000009288	PUM1	100	97.634	Chrysemys_picta_bellii
ENSNGAG00000002378	Pum1	100	99.364	ENSCANG00000042606	PUM1	100	99.364	Colobus_angolensis_palliatus
ENSNGAG00000002378	Pum1	100	99.126	ENSCGRG00001024949	Pum1	100	99.047	Cricetulus_griseus_chok1gshd
ENSNGAG00000002378	Pum1	100	99.126	ENSCGRG00000014197	Pum1	100	99.047	Cricetulus_griseus_crigri
ENSNGAG00000002378	Pum1	90	76.204	ENSCSEG00000015981	pum1	100	77.798	Cynoglossus_semilaevis
ENSNGAG00000002378	Pum1	100	80.817	ENSCVAG00000007043	pum1	100	75.868	Cyprinodon_variegatus
ENSNGAG00000002378	Pum1	100	84.864	ENSDARG00000099256	pum1	100	79.348	Danio_rerio
ENSNGAG00000002378	Pum1	100	98.823	ENSDNOG00000010939	PUM1	100	98.823	Dasypus_novemcinctus
ENSNGAG00000002378	Pum1	85	99.517	ENSDORG00000001875	Pum1	100	99.517	Dipodomys_ordii
ENSNGAG00000002378	Pum1	85	100.000	ENSETEG00000004355	PUM1	87	93.555	Echinops_telfairi
ENSNGAG00000002378	Pum1	100	99.074	ENSEASG00005010813	PUM1	100	99.074	Equus_asinus_asinus
ENSNGAG00000002378	Pum1	100	98.991	ENSECAG00000021369	PUM1	100	98.991	Equus_caballus
ENSNGAG00000002378	Pum1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSNGAG00000002378	Pum1	100	83.476	ENSELUG00000002409	pum1	100	83.787	Esox_lucius
ENSNGAG00000002378	Pum1	100	99.364	ENSFCAG00000010374	PUM1	100	99.364	Felis_catus
ENSNGAG00000002378	Pum1	100	96.415	ENSFALG00000001214	PUM1	97	94.724	Ficedula_albicollis
ENSNGAG00000002378	Pum1	100	99.159	ENSFDAG00000011319	PUM1	100	99.159	Fukomys_damarensis
ENSNGAG00000002378	Pum1	70	88.403	ENSGMOG00000010491	pum1	100	74.752	Gadus_morhua
ENSNGAG00000002378	Pum1	100	98.010	ENSGALG00000042598	PUM1	100	97.484	Gallus_gallus
ENSNGAG00000002378	Pum1	100	80.941	ENSGAFG00000015617	pum1	100	90.120	Gambusia_affinis
ENSNGAG00000002378	Pum1	100	81.034	ENSGACG00000005717	pum1	100	76.277	Gasterosteus_aculeatus
ENSNGAG00000002378	Pum1	100	97.512	ENSGAGG00000001290	PUM1	99	98.178	Gopherus_agassizii
ENSNGAG00000002378	Pum1	100	99.364	ENSGGOG00000011983	PUM1	100	99.364	Gorilla_gorilla
ENSNGAG00000002378	Pum1	100	81.064	ENSHBUG00000018718	pum1	100	76.281	Haplochromis_burtoni
ENSNGAG00000002378	Pum1	100	99.075	ENSHGLG00000013819	Pum1	100	99.075	Heterocephalus_glaber_female
ENSNGAG00000002378	Pum1	100	99.075	ENSHGLG00100008621	Pum1	100	99.075	Heterocephalus_glaber_male
ENSNGAG00000002378	Pum1	100	78.936	ENSIPUG00000020421	pum1	100	77.972	Ictalurus_punctatus
ENSNGAG00000002378	Pum1	100	99.682	ENSSTOG00000010757	PUM1	100	99.682	Ictidomys_tridecemlineatus
ENSNGAG00000002378	Pum1	100	99.158	ENSJJAG00000000530	Pum1	100	99.158	Jaculus_jaculus
ENSNGAG00000002378	Pum1	100	80.446	ENSKMAG00000003481	pum1	100	75.868	Kryptolebias_marmoratus
ENSNGAG00000002378	Pum1	100	80.421	ENSLBEG00000002527	pum1	100	75.828	Labrus_bergylta
ENSNGAG00000002378	Pum1	100	88.724	ENSLACG00000017188	PUM1	99	86.595	Latimeria_chalumnae
ENSNGAG00000002378	Pum1	100	91.553	ENSLOCG00000005210	pum1	99	88.230	Lepisosteus_oculatus
ENSNGAG00000002378	Pum1	100	98.486	ENSLAFG00000003178	PUM1	100	98.486	Loxodonta_africana
ENSNGAG00000002378	Pum1	100	99.364	ENSMFAG00000010291	PUM1	100	99.517	Macaca_fascicularis
ENSNGAG00000002378	Pum1	100	99.364	ENSMMUG00000013520	PUM1	100	99.364	Macaca_mulatta
ENSNGAG00000002378	Pum1	100	99.364	ENSMNEG00000034639	PUM1	100	99.364	Macaca_nemestrina
ENSNGAG00000002378	Pum1	100	99.364	ENSMLEG00000038743	PUM1	100	99.364	Mandrillus_leucophaeus
ENSNGAG00000002378	Pum1	100	81.064	ENSMAMG00000011606	pum1	100	76.529	Mastacembelus_armatus
ENSNGAG00000002378	Pum1	100	81.064	ENSMZEG00005005834	pum1	100	76.281	Maylandia_zebra
ENSNGAG00000002378	Pum1	100	97.637	ENSMGAG00000000724	PUM1	100	97.225	Meleagris_gallopavo
ENSNGAG00000002378	Pum1	100	99.153	ENSMAUG00000022090	Pum1	100	99.153	Mesocricetus_auratus
ENSNGAG00000002378	Pum1	99	96.967	ENSMICG00000012213	-	99	96.967	Microcebus_murinus
ENSNGAG00000002378	Pum1	100	99.159	ENSMICG00000007713	-	100	99.159	Microcebus_murinus
ENSNGAG00000002378	Pum1	100	99.075	ENSMOCG00000015463	Pum1	100	99.075	Microtus_ochrogaster
ENSNGAG00000002378	Pum1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSNGAG00000002378	Pum1	100	97.395	ENSMODG00000017067	PUM1	100	97.395	Monodelphis_domestica
ENSNGAG00000002378	Pum1	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSNGAG00000002378	Pum1	100	98.876	MGP_CAROLIEiJ_G0026549	Pum1	100	98.738	Mus_caroli
ENSNGAG00000002378	Pum1	100	99.001	ENSMUSG00000028580	Pum1	100	98.991	Mus_musculus
ENSNGAG00000002378	Pum1	100	99.001	MGP_PahariEiJ_G0028881	Pum1	100	98.941	Mus_pahari
ENSNGAG00000002378	Pum1	100	99.001	MGP_SPRETEiJ_G0027529	Pum1	100	98.941	Mus_spretus
ENSNGAG00000002378	Pum1	100	98.990	ENSMPUG00000015454	PUM1	100	98.990	Mustela_putorius_furo
ENSNGAG00000002378	Pum1	100	98.753	ENSMLUG00000006490	PUM1	100	98.738	Myotis_lucifugus
ENSNGAG00000002378	Pum1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSNGAG00000002378	Pum1	100	97.980	ENSNLEG00000001151	PUM1	100	97.917	Nomascus_leucogenys
ENSNGAG00000002378	Pum1	84	96.284	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSNGAG00000002378	Pum1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSNGAG00000002378	Pum1	100	99.158	ENSODEG00000003465	PUM1	100	99.158	Octodon_degus
ENSNGAG00000002378	Pum1	100	81.618	ENSONIG00000002290	pum1	100	76.612	Oreochromis_niloticus
ENSNGAG00000002378	Pum1	83	76.304	ENSOANG00000004902	-	100	77.971	Ornithorhynchus_anatinus
ENSNGAG00000002378	Pum1	100	99.002	ENSOCUG00000008641	PUM1	99	98.823	Oryctolagus_cuniculus
ENSNGAG00000002378	Pum1	100	81.931	ENSORLG00000011482	pum1	100	76.112	Oryzias_latipes
ENSNGAG00000002378	Pum1	100	82.054	ENSORLG00020019461	pum1	100	76.112	Oryzias_latipes_hni
ENSNGAG00000002378	Pum1	100	82.054	ENSORLG00015011375	pum1	100	76.194	Oryzias_latipes_hsok
ENSNGAG00000002378	Pum1	90	92.530	ENSOMEG00000009312	pum1	100	90.120	Oryzias_melastigma
ENSNGAG00000002378	Pum1	100	97.917	ENSOGAG00000011063	PUM1	100	96.306	Otolemur_garnettii
ENSNGAG00000002378	Pum1	100	98.611	ENSOARG00000001899	PUM1	100	98.792	Ovis_aries
ENSNGAG00000002378	Pum1	100	99.364	ENSPPAG00000044003	PUM1	100	99.364	Pan_paniscus
ENSNGAG00000002378	Pum1	100	99.364	ENSPPRG00000001370	PUM1	100	99.364	Panthera_pardus
ENSNGAG00000002378	Pum1	100	99.158	ENSPTIG00000010798	PUM1	100	99.153	Panthera_tigris_altaica
ENSNGAG00000002378	Pum1	100	99.364	ENSPTRG00000000453	PUM1	100	99.364	Pan_troglodytes
ENSNGAG00000002378	Pum1	100	99.364	ENSPANG00000016338	PUM1	100	99.517	Papio_anubis
ENSNGAG00000002378	Pum1	100	82.497	ENSPKIG00000010578	pum1	100	78.300	Paramormyrops_kingsleyae
ENSNGAG00000002378	Pum1	100	98.005	ENSPSIG00000014118	PUM1	100	97.559	Pelodiscus_sinensis
ENSNGAG00000002378	Pum1	100	77.220	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSNGAG00000002378	Pum1	100	99.159	ENSPEMG00000010009	Pum1	100	99.159	Peromyscus_maniculatus_bairdii
ENSNGAG00000002378	Pum1	100	97.637	ENSPCIG00000014151	PUM1	100	97.886	Phascolarctos_cinereus
ENSNGAG00000002378	Pum1	93	83.744	ENSPFOG00000007289	pum1	99	82.416	Poecilia_formosa
ENSNGAG00000002378	Pum1	100	82.840	ENSPLAG00000007256	pum1	100	78.238	Poecilia_latipinna
ENSNGAG00000002378	Pum1	85	82.963	ENSPMEG00000019543	pum1	99	78.473	Poecilia_mexicana
ENSNGAG00000002378	Pum1	100	80.941	ENSPREG00000005195	pum1	100	80.970	Poecilia_reticulata
ENSNGAG00000002378	Pum1	100	99.128	ENSPPYG00000001621	PUM1	100	97.360	Pongo_abelii
ENSNGAG00000002378	Pum1	84	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSNGAG00000002378	Pum1	100	99.159	ENSPCOG00000004398	PUM1	100	99.159	Propithecus_coquereli
ENSNGAG00000002378	Pum1	100	98.611	ENSPVAG00000005207	PUM1	97	96.970	Pteropus_vampyrus
ENSNGAG00000002378	Pum1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSNGAG00000002378	Pum1	100	80.693	ENSPNAG00000026728	pum1	100	80.376	Pygocentrus_nattereri
ENSNGAG00000002378	Pum1	100	99.251	ENSRNOG00000011709	Pum1	100	98.990	Rattus_norvegicus
ENSNGAG00000002378	Pum1	100	99.364	ENSRBIG00000042521	PUM1	100	99.517	Rhinopithecus_bieti
ENSNGAG00000002378	Pum1	100	99.376	ENSRROG00000020156	PUM1	100	99.364	Rhinopithecus_roxellana
ENSNGAG00000002378	Pum1	100	99.470	ENSSBOG00000032037	PUM1	100	99.470	Saimiri_boliviensis_boliviensis
ENSNGAG00000002378	Pum1	100	97.395	ENSSHAG00000010918	PUM1	100	97.395	Sarcophilus_harrisii
ENSNGAG00000002378	Pum1	100	81.064	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSNGAG00000002378	Pum1	100	81.188	ENSSDUG00000009021	pum1	100	76.612	Seriola_dumerili
ENSNGAG00000002378	Pum1	100	81.188	ENSSLDG00000009667	pum1	100	78.653	Seriola_lalandi_dorsalis
ENSNGAG00000002378	Pum1	99	99.242	ENSSARG00000003055	PUM1	91	99.115	Sorex_araneus
ENSNGAG00000002378	Pum1	100	97.758	ENSSPUG00000006267	PUM1	100	96.801	Sphenodon_punctatus
ENSNGAG00000002378	Pum1	90	91.325	ENSSPAG00000016636	pum1	100	77.413	Stegastes_partitus
ENSNGAG00000002378	Pum1	100	99.411	ENSSSCG00000003591	PUM1	100	99.411	Sus_scrofa
ENSNGAG00000002378	Pum1	100	81.064	ENSTRUG00000013121	pum1	100	83.086	Takifugu_rubripes
ENSNGAG00000002378	Pum1	100	80.841	ENSTNIG00000016983	pum1	99	76.680	Tetraodon_nigroviridis
ENSNGAG00000002378	Pum1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSNGAG00000002378	Pum1	92	99.179	ENSTTRG00000007436	PUM1	90	99.179	Tursiops_truncatus
ENSNGAG00000002378	Pum1	99	98.893	ENSUAMG00000018262	-	100	98.893	Ursus_americanus
ENSNGAG00000002378	Pum1	95	99.275	ENSUMAG00000009211	PUM1	100	99.275	Ursus_maritimus
ENSNGAG00000002378	Pum1	100	99.253	ENSVPAG00000005902	PUM1	92	99.626	Vicugna_pacos
ENSNGAG00000002378	Pum1	100	99.327	ENSVVUG00000014631	PUM1	100	99.327	Vulpes_vulpes
ENSNGAG00000002378	Pum1	100	88.447	ENSXETG00000012904	pum1	99	87.154	Xenopus_tropicalis
ENSNGAG00000002378	Pum1	100	80.941	ENSXMAG00000002945	pum1	100	77.927	Xiphophorus_maculatus