EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000002454 (Gene tree)
Gene ID: 103738209
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 10833 bases
Position: chrKL201652.1:1109757-1120589
Accession: 103738209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002693	RRM_1	PF00076.22	3.3e-59	1	4
ENSNGAP00000002693	RRM_1	PF00076.22	3.3e-59	2	4
ENSNGAP00000002693	RRM_1	PF00076.22	3.3e-59	3	4
ENSNGAP00000002693	RRM_1	PF00076.22	3.3e-59	4	4
ENSNGAP00000002682	RRM_1	PF00076.22	3.4e-59	1	4
ENSNGAP00000002682	RRM_1	PF00076.22	3.4e-59	2	4
ENSNGAP00000002682	RRM_1	PF00076.22	3.4e-59	3	4
ENSNGAP00000002682	RRM_1	PF00076.22	3.4e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000003307	-	2730	XM_008838074	ENSNGAP00000002682	718 (aa)	XP_008836296	UPI0004ED317D
ENSNGAT00000003325	-	2151	-	ENSNGAP00000002693	716 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000002454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000002454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000002454	-	52	81.016	ENSNGAG00000006188	-	54	80.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000002454	-	61	85.294	ENSG00000115053	NCL	93	85.091	Homo_sapiens
ENSNGAG00000002454	-	53	89.710	ENSAMEG00000016289	NCL	92	79.701	Ailuropoda_melanoleuca
ENSNGAG00000002454	-	99	65.915	ENSANAG00000024378	-	81	80.451	Aotus_nancymaae
ENSNGAG00000002454	-	53	90.237	ENSANAG00000035814	-	92	81.325	Aotus_nancymaae
ENSNGAG00000002454	-	94	73.517	ENSBTAG00000016174	NCL	92	77.219	Bos_taurus
ENSNGAG00000002454	-	75	87.866	ENSBTAG00000026909	-	87	88.235	Bos_taurus
ENSNGAG00000002454	-	90	87.745	ENSBTAG00000051320	-	85	85.915	Bos_taurus
ENSNGAG00000002454	-	53	86.420	ENSBTAG00000050728	-	81	86.420	Bos_taurus
ENSNGAG00000002454	-	53	90.237	ENSCJAG00000013538	NCL	92	79.970	Callithrix_jacchus
ENSNGAG00000002454	-	91	81.081	ENSCAFG00000011037	NCL	92	80.448	Canis_familiaris
ENSNGAG00000002454	-	84	79.739	ENSCAFG00020023145	NCL	88	79.058	Canis_lupus_dingo
ENSNGAG00000002454	-	74	86.548	ENSCHIG00000021052	-	81	92.070	Capra_hircus
ENSNGAG00000002454	-	91	59.665	ENSCHIG00000012143	-	85	74.713	Capra_hircus
ENSNGAG00000002454	-	91	68.358	ENSCHIG00000026149	-	93	72.090	Capra_hircus
ENSNGAG00000002454	-	85	74.757	ENSCHIG00000010894	-	91	78.331	Capra_hircus
ENSNGAG00000002454	-	91	80.752	ENSTSYG00000004355	-	92	80.752	Carlito_syrichta
ENSNGAG00000002454	-	70	80.488	ENSTSYG00000036886	-	86	80.488	Carlito_syrichta
ENSNGAG00000002454	-	95	77.474	ENSTSYG00000029779	-	98	76.988	Carlito_syrichta
ENSNGAG00000002454	-	53	84.697	ENSCAPG00000009405	NCL	91	75.794	Cavia_aperea
ENSNGAG00000002454	-	53	89.710	ENSCPOG00000001034	NCL	92	78.561	Cavia_porcellus
ENSNGAG00000002454	-	53	90.237	ENSCCAG00000021040	-	92	80.241	Cebus_capucinus
ENSNGAG00000002454	-	71	86.432	ENSCCAG00000000551	-	82	86.567	Cebus_capucinus
ENSNGAG00000002454	-	91	80.543	ENSCATG00000037033	NCL	92	80.422	Cercocebus_atys
ENSNGAG00000002454	-	91	77.511	ENSCLAG00000013080	NCL	92	78.326	Chinchilla_lanigera
ENSNGAG00000002454	-	53	90.000	ENSCSAG00000006660	NCL	82	89.974	Chlorocebus_sabaeus
ENSNGAG00000002454	-	60	71.296	ENSCHOG00000012860	NCL	88	71.429	Choloepus_hoffmanni
ENSNGAG00000002454	-	62	86.769	ENSCANG00000036756	NCL	74	86.769	Colobus_angolensis_palliatus
ENSNGAG00000002454	-	91	86.778	ENSCGRG00001024315	-	91	87.860	Cricetulus_griseus_chok1gshd
ENSNGAG00000002454	-	92	72.851	ENSCGRG00001022350	-	95	74.242	Cricetulus_griseus_chok1gshd
ENSNGAG00000002454	-	85	87.419	ENSCGRG00000017894	-	88	87.097	Cricetulus_griseus_crigri
ENSNGAG00000002454	-	92	73.042	ENSCGRG00000000507	-	93	72.576	Cricetulus_griseus_crigri
ENSNGAG00000002454	-	91	77.361	ENSDNOG00000010783	-	92	77.511	Dasypus_novemcinctus
ENSNGAG00000002454	-	100	69.348	ENSDNOG00000046347	-	99	69.348	Dasypus_novemcinctus
ENSNGAG00000002454	-	53	89.418	ENSDORG00000012513	-	91	79.728	Dipodomys_ordii
ENSNGAG00000002454	-	51	78.356	ENSDORG00000023596	-	92	69.692	Dipodomys_ordii
ENSNGAG00000002454	-	53	85.224	ENSETEG00000018937	-	85	75.323	Echinops_telfairi
ENSNGAG00000002454	-	62	57.079	ENSETEG00000008553	-	88	58.716	Echinops_telfairi
ENSNGAG00000002454	-	71	61.141	ENSETEG00000008139	-	89	60.976	Echinops_telfairi
ENSNGAG00000002454	-	53	84.615	ENSETEG00000014756	-	86	84.697	Echinops_telfairi
ENSNGAG00000002454	-	78	93.636	ENSEASG00005008488	NCL	91	79.695	Equus_asinus_asinus
ENSNGAG00000002454	-	91	80.301	ENSECAG00000021868	NCL	92	79.881	Equus_caballus
ENSNGAG00000002454	-	85	75.817	ENSEEUG00000005913	NCL	85	76.183	Erinaceus_europaeus
ENSNGAG00000002454	-	91	80.810	ENSFCAG00000027622	NCL	92	81.073	Felis_catus
ENSNGAG00000002454	-	91	80.880	ENSFDAG00000014291	NCL	92	80.909	Fukomys_damarensis
ENSNGAG00000002454	-	75	95.000	ENSGGOG00000004300	NCL	88	88.259	Gorilla_gorilla
ENSNGAG00000002454	-	53	89.710	ENSHGLG00000002031	-	92	80.422	Heterocephalus_glaber_female
ENSNGAG00000002454	-	52	82.181	ENSHGLG00000011069	-	92	72.838	Heterocephalus_glaber_female
ENSNGAG00000002454	-	91	81.212	ENSHGLG00100014537	-	92	80.909	Heterocephalus_glaber_male
ENSNGAG00000002454	-	72	81.067	ENSHGLG00100000745	-	82	81.167	Heterocephalus_glaber_male
ENSNGAG00000002454	-	53	86.772	ENSJJAG00000016165	Ncl	91	80.728	Jaculus_jaculus
ENSNGAG00000002454	-	91	67.927	ENSLAFG00000013061	NCL	91	67.119	Loxodonta_africana
ENSNGAG00000002454	-	91	80.572	ENSMFAG00000040385	NCL	92	80.451	Macaca_fascicularis
ENSNGAG00000002454	-	91	80.572	ENSMMUG00000018094	NCL	92	80.451	Macaca_mulatta
ENSNGAG00000002454	-	74	95.000	ENSMNEG00000023839	NCL	78	88.306	Macaca_nemestrina
ENSNGAG00000002454	-	91	80.694	ENSMLEG00000028935	NCL	92	80.572	Mandrillus_leucophaeus
ENSNGAG00000002454	-	91	80.241	ENSMICG00000002538	-	92	80.090	Microcebus_murinus
ENSNGAG00000002454	-	92	67.171	ENSMICG00000029975	-	87	75.177	Microcebus_murinus
ENSNGAG00000002454	-	91	83.714	MGP_CAROLIEiJ_G0014362	Ncl	92	84.195	Mus_caroli
ENSNGAG00000002454	-	91	85.106	ENSMUSG00000026234	Ncl	92	85.281	Mus_musculus
ENSNGAG00000002454	-	91	85.997	MGP_PahariEiJ_G0027599	Ncl	92	85.000	Mus_pahari
ENSNGAG00000002454	-	91	85.084	MGP_SPRETEiJ_G0015164	Ncl	92	85.236	Mus_spretus
ENSNGAG00000002454	-	91	76.716	ENSMLUG00000014547	NCL	92	77.463	Myotis_lucifugus
ENSNGAG00000002454	-	61	72.559	ENSNLEG00000014107	-	85	71.043	Nomascus_leucogenys
ENSNGAG00000002454	-	53	57.388	ENSODEG00000007803	-	90	59.612	Octodon_degus
ENSNGAG00000002454	-	54	85.195	ENSODEG00000003281	-	92	75.857	Octodon_degus
ENSNGAG00000002454	-	72	82.203	ENSODEG00000002441	-	86	82.203	Octodon_degus
ENSNGAG00000002454	-	91	71.277	ENSOCUG00000004312	NCL	91	73.404	Oryctolagus_cuniculus
ENSNGAG00000002454	-	65	83.641	ENSOGAG00000027852	NCL	91	62.614	Otolemur_garnettii
ENSNGAG00000002454	-	91	75.994	ENSOARG00000020709	-	92	75.994	Ovis_aries
ENSNGAG00000002454	-	75	74.093	ENSOARG00000004072	-	92	64.065	Ovis_aries
ENSNGAG00000002454	-	60	85.219	ENSOARG00000013710	-	94	71.916	Ovis_aries
ENSNGAG00000002454	-	88	61.972	ENSOARG00000013270	-	100	60.140	Ovis_aries
ENSNGAG00000002454	-	75	95.000	ENSPPAG00000011619	NCL	92	81.476	Pan_paniscus
ENSNGAG00000002454	-	91	80.781	ENSPPRG00000012603	NCL	92	80.597	Panthera_pardus
ENSNGAG00000002454	-	91	80.455	ENSPTIG00000010393	NCL	91	79.819	Panthera_tigris_altaica
ENSNGAG00000002454	-	91	80.451	ENSPTRG00000013025	NCL	92	80.602	Pan_troglodytes
ENSNGAG00000002454	-	91	80.572	ENSPANG00000010292	NCL	92	80.451	Papio_anubis
ENSNGAG00000002454	-	61	77.162	ENSPPYG00000013265	NCL	92	75.632	Pongo_abelii
ENSNGAG00000002454	-	91	77.439	ENSPCOG00000004160	-	93	83.598	Propithecus_coquereli
ENSNGAG00000002454	-	91	81.627	ENSPCOG00000003051	-	91	81.476	Propithecus_coquereli
ENSNGAG00000002454	-	91	81.420	ENSPVAG00000000297	NCL	92	80.902	Pteropus_vampyrus
ENSNGAG00000002454	-	91	86.495	ENSRNOG00000018273	Ncl	92	86.898	Rattus_norvegicus
ENSNGAG00000002454	-	66	92.042	ENSRBIG00000035396	-	81	90.268	Rhinopithecus_bieti
ENSNGAG00000002454	-	91	77.108	ENSRBIG00000037525	-	91	77.444	Rhinopithecus_bieti
ENSNGAG00000002454	-	91	80.723	ENSRROG00000028756	-	91	81.476	Rhinopithecus_roxellana
ENSNGAG00000002454	-	94	75.845	ENSRROG00000036103	-	99	77.389	Rhinopithecus_roxellana
ENSNGAG00000002454	-	53	89.974	ENSSBOG00000029193	-	92	81.109	Saimiri_boliviensis_boliviensis
ENSNGAG00000002454	-	61	78.636	ENSSBOG00000027549	-	85	81.530	Saimiri_boliviensis_boliviensis
ENSNGAG00000002454	-	53	89.182	ENSSSCG00000016275	NCL	92	80.444	Sus_scrofa
ENSNGAG00000002454	-	65	75.354	ENSTBEG00000002469	-	67	75.143	Tupaia_belangeri
ENSNGAG00000002454	-	55	77.836	ENSTBEG00000001546	-	85	71.935	Tupaia_belangeri
ENSNGAG00000002454	-	91	78.947	ENSTTRG00000009094	NCL	91	79.699	Tursiops_truncatus
ENSNGAG00000002454	-	53	89.974	ENSUAMG00000005639	NCL	88	85.327	Ursus_americanus
ENSNGAG00000002454	-	53	89.974	ENSUMAG00000015789	NCL	92	80.360	Ursus_maritimus
ENSNGAG00000002454	-	65	84.553	ENSVPAG00000001796	NCL	69	81.690	Vicugna_pacos
ENSNGAG00000002454	-	91	79.511	ENSVVUG00000025564	NCL	91	78.852	Vulpes_vulpes