EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000002520 (Gene tree)
Gene ID: 103745718
Gene Symbol: Polr1e
Alias: 53kDa|D030019D19Rik|Paf53|Praf1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 16119 bases
Position: chrKL203377.1:1392885-1409003
Accession: 103745718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002688	RNA_pol_I_A49	PF06870.12	5.3e-107	1	1
ENSNGAP00000002697	RNA_pol_I_A49	PF06870.12	4e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000003318	-	1651	XM_008847683	ENSNGAP00000002688	434 (aa)	XP_008845905	UPI0004ED6C1C
ENSNGAT00000003331	-	1380	-	ENSNGAP00000002697	459 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000002520's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000002520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000002520	Polr1e	96	82.974	ENSG00000137054	POLR1E	99	82.974	Homo_sapiens
ENSNGAG00000002520	Polr1e	94	42.336	ENSAPOG00000012452	polr1e	98	42.336	Acanthochromis_polyacanthus
ENSNGAG00000002520	Polr1e	100	76.141	ENSAMEG00000010193	POLR1E	100	76.141	Ailuropoda_melanoleuca
ENSNGAG00000002520	Polr1e	91	43.564	ENSACIG00000009884	polr1e	99	44.162	Amphilophus_citrinellus
ENSNGAG00000002520	Polr1e	94	45.742	ENSAOCG00000005665	polr1e	98	45.742	Amphiprion_ocellaris
ENSNGAG00000002520	Polr1e	94	45.499	ENSAPEG00000020581	polr1e	98	45.499	Amphiprion_percula
ENSNGAG00000002520	Polr1e	93	47.059	ENSATEG00000020609	polr1e	98	47.059	Anabas_testudineus
ENSNGAG00000002520	Polr1e	78	55.526	ENSAPLG00000010340	POLR1E	99	55.526	Anas_platyrhynchos
ENSNGAG00000002520	Polr1e	96	82.974	ENSANAG00000038046	POLR1E	99	82.974	Aotus_nancymaae
ENSNGAG00000002520	Polr1e	94	45.255	ENSACLG00000013685	polr1e	97	45.255	Astatotilapia_calliptera
ENSNGAG00000002520	Polr1e	94	43.584	ENSAMXG00000018181	polr1e	98	43.584	Astyanax_mexicanus
ENSNGAG00000002520	Polr1e	96	83.732	ENSBTAG00000012243	POLR1E	99	83.732	Bos_taurus
ENSNGAG00000002520	Polr1e	91	76.904	ENSCJAG00000010512	POLR1E	93	81.720	Callithrix_jacchus
ENSNGAG00000002520	Polr1e	96	86.091	ENSCAFG00000002377	POLR1E	99	86.091	Canis_familiaris
ENSNGAG00000002520	Polr1e	96	86.331	ENSCAFG00020017851	POLR1E	99	86.331	Canis_lupus_dingo
ENSNGAG00000002520	Polr1e	95	83.942	ENSCHIG00000019479	POLR1E	98	83.942	Capra_hircus
ENSNGAG00000002520	Polr1e	96	83.213	ENSTSYG00000002075	POLR1E	99	83.213	Carlito_syrichta
ENSNGAG00000002520	Polr1e	66	87.456	ENSCAPG00000015653	POLR1E	99	87.456	Cavia_aperea
ENSNGAG00000002520	Polr1e	96	88.010	ENSCPOG00000009965	POLR1E	99	88.010	Cavia_porcellus
ENSNGAG00000002520	Polr1e	96	75.120	ENSCCAG00000029460	POLR1E	99	75.120	Cebus_capucinus
ENSNGAG00000002520	Polr1e	96	82.494	ENSCATG00000031732	POLR1E	99	86.486	Cercocebus_atys
ENSNGAG00000002520	Polr1e	84	90.385	ENSCLAG00000012701	POLR1E	96	90.385	Chinchilla_lanigera
ENSNGAG00000002520	Polr1e	96	82.014	ENSCSAG00000010782	POLR1E	99	82.014	Chlorocebus_sabaeus
ENSNGAG00000002520	Polr1e	91	75.381	ENSCHOG00000013024	POLR1E	83	75.381	Choloepus_hoffmanni
ENSNGAG00000002520	Polr1e	94	67.073	ENSCPBG00000006923	POLR1E	99	67.317	Chrysemys_picta_bellii
ENSNGAG00000002520	Polr1e	96	81.775	ENSCANG00000036112	POLR1E	99	85.586	Colobus_angolensis_palliatus
ENSNGAG00000002520	Polr1e	99	85.219	ENSCGRG00001006197	Polr1e	99	85.219	Cricetulus_griseus_chok1gshd
ENSNGAG00000002520	Polr1e	99	84.758	ENSCGRG00000006430	Polr1e	99	84.758	Cricetulus_griseus_crigri
ENSNGAG00000002520	Polr1e	90	45.226	ENSCSEG00000005121	polr1e	96	45.226	Cynoglossus_semilaevis
ENSNGAG00000002520	Polr1e	93	42.647	ENSCVAG00000019759	polr1e	98	42.647	Cyprinodon_variegatus
ENSNGAG00000002520	Polr1e	91	45.592	ENSDARG00000006434	polr1e	97	45.255	Danio_rerio
ENSNGAG00000002520	Polr1e	97	74.786	ENSDNOG00000010257	POLR1E	100	74.786	Dasypus_novemcinctus
ENSNGAG00000002520	Polr1e	82	81.285	ENSETEG00000018204	POLR1E	99	81.285	Echinops_telfairi
ENSNGAG00000002520	Polr1e	96	86.571	ENSEASG00005000675	POLR1E	99	86.571	Equus_asinus_asinus
ENSNGAG00000002520	Polr1e	96	86.331	ENSECAG00000014669	POLR1E	99	86.331	Equus_caballus
ENSNGAG00000002520	Polr1e	91	73.096	ENSEEUG00000011928	POLR1E	84	73.096	Erinaceus_europaeus
ENSNGAG00000002520	Polr1e	93	46.814	ENSELUG00000008150	polr1e	97	46.814	Esox_lucius
ENSNGAG00000002520	Polr1e	96	84.211	ENSFCAG00000013081	POLR1E	99	84.211	Felis_catus
ENSNGAG00000002520	Polr1e	91	60.051	ENSFALG00000012950	POLR1E	99	60.051	Ficedula_albicollis
ENSNGAG00000002520	Polr1e	96	87.260	ENSFDAG00000016917	POLR1E	99	87.260	Fukomys_damarensis
ENSNGAG00000002520	Polr1e	94	44.310	ENSFHEG00000009801	polr1e	98	44.310	Fundulus_heteroclitus
ENSNGAG00000002520	Polr1e	91	38.653	ENSGMOG00000003336	POLR1E	93	38.653	Gadus_morhua
ENSNGAG00000002520	Polr1e	94	60.976	ENSGALG00000005395	POLR1E	99	60.976	Gallus_gallus
ENSNGAG00000002520	Polr1e	93	44.608	ENSGAFG00000004850	polr1e	98	44.608	Gambusia_affinis
ENSNGAG00000002520	Polr1e	93	42.754	ENSGACG00000016087	polr1e	98	42.754	Gasterosteus_aculeatus
ENSNGAG00000002520	Polr1e	94	59.169	ENSGAGG00000001659	POLR1E	98	59.367	Gopherus_agassizii
ENSNGAG00000002520	Polr1e	96	82.974	ENSGGOG00000001882	POLR1E	99	86.486	Gorilla_gorilla
ENSNGAG00000002520	Polr1e	94	45.255	ENSHBUG00000002559	polr1e	97	45.255	Haplochromis_burtoni
ENSNGAG00000002520	Polr1e	96	87.260	ENSHGLG00000002036	POLR1E	99	87.260	Heterocephalus_glaber_female
ENSNGAG00000002520	Polr1e	96	87.500	ENSHGLG00100012784	POLR1E	99	87.500	Heterocephalus_glaber_male
ENSNGAG00000002520	Polr1e	93	44.118	ENSHCOG00000002774	polr1e	98	44.118	Hippocampus_comes
ENSNGAG00000002520	Polr1e	94	43.932	ENSIPUG00000003019	polr1e	98	43.932	Ictalurus_punctatus
ENSNGAG00000002520	Polr1e	96	85.612	ENSSTOG00000009810	POLR1E	99	85.612	Ictidomys_tridecemlineatus
ENSNGAG00000002520	Polr1e	100	85.484	ENSJJAG00000020731	Polr1e	100	85.484	Jaculus_jaculus
ENSNGAG00000002520	Polr1e	94	43.447	ENSKMAG00000000046	polr1e	98	43.447	Kryptolebias_marmoratus
ENSNGAG00000002520	Polr1e	93	46.420	ENSLBEG00000003104	polr1e	97	46.667	Labrus_bergylta
ENSNGAG00000002520	Polr1e	82	61.496	ENSLACG00000003416	POLR1E	99	61.918	Latimeria_chalumnae
ENSNGAG00000002520	Polr1e	94	50.976	ENSLOCG00000012859	polr1e	98	50.976	Lepisosteus_oculatus
ENSNGAG00000002520	Polr1e	97	83.373	ENSLAFG00000012831	POLR1E	100	83.373	Loxodonta_africana
ENSNGAG00000002520	Polr1e	97	81.797	ENSMFAG00000045465	POLR1E	99	86.486	Macaca_fascicularis
ENSNGAG00000002520	Polr1e	96	82.494	ENSMMUG00000017892	POLR1E	99	86.486	Macaca_mulatta
ENSNGAG00000002520	Polr1e	96	76.112	ENSMNEG00000040283	POLR1E	99	82.301	Macaca_nemestrina
ENSNGAG00000002520	Polr1e	96	82.494	ENSMLEG00000031135	POLR1E	99	86.486	Mandrillus_leucophaeus
ENSNGAG00000002520	Polr1e	93	45.098	ENSMAMG00000001260	polr1e	97	45.098	Mastacembelus_armatus
ENSNGAG00000002520	Polr1e	94	45.255	ENSMZEG00005021536	polr1e	97	45.255	Maylandia_zebra
ENSNGAG00000002520	Polr1e	100	84.562	ENSMAUG00000021044	Polr1e	100	84.562	Mesocricetus_auratus
ENSNGAG00000002520	Polr1e	96	84.173	ENSMICG00000003673	POLR1E	99	84.173	Microcebus_murinus
ENSNGAG00000002520	Polr1e	99	85.219	ENSMOCG00000012920	Polr1e	99	85.219	Microtus_ochrogaster
ENSNGAG00000002520	Polr1e	93	45.985	ENSMMOG00000007391	polr1e	98	45.985	Mola_mola
ENSNGAG00000002520	Polr1e	91	72.727	ENSMODG00000002884	POLR1E	97	72.727	Monodelphis_domestica
ENSNGAG00000002520	Polr1e	93	45.631	ENSMALG00000002665	polr1e	97	45.631	Monopterus_albus
ENSNGAG00000002520	Polr1e	99	83.141	MGP_CAROLIEiJ_G0025967	Polr1e	99	83.141	Mus_caroli
ENSNGAG00000002520	Polr1e	99	83.834	ENSMUSG00000028318	Polr1e	99	83.834	Mus_musculus
ENSNGAG00000002520	Polr1e	99	83.603	MGP_PahariEiJ_G0024114	Polr1e	97	86.005	Mus_pahari
ENSNGAG00000002520	Polr1e	99	83.603	MGP_SPRETEiJ_G0026930	Polr1e	99	83.603	Mus_spretus
ENSNGAG00000002520	Polr1e	97	77.707	ENSMPUG00000006040	POLR1E	100	77.707	Mustela_putorius_furo
ENSNGAG00000002520	Polr1e	99	81.776	ENSMLUG00000012688	POLR1E	99	81.776	Myotis_lucifugus
ENSNGAG00000002520	Polr1e	94	45.499	ENSNBRG00000016822	polr1e	97	45.499	Neolamprologus_brichardi
ENSNGAG00000002520	Polr1e	96	82.494	ENSNLEG00000003616	POLR1E	99	85.586	Nomascus_leucogenys
ENSNGAG00000002520	Polr1e	72	76.250	ENSMEUG00000015372	-	80	76.250	Notamacropus_eugenii
ENSNGAG00000002520	Polr1e	71	92.000	ENSOPRG00000014206	POLR1E	91	92.000	Ochotona_princeps
ENSNGAG00000002520	Polr1e	99	86.916	ENSODEG00000014565	POLR1E	99	86.916	Octodon_degus
ENSNGAG00000002520	Polr1e	94	45.763	ENSONIG00000008921	polr1e	97	45.742	Oreochromis_niloticus
ENSNGAG00000002520	Polr1e	96	82.254	ENSOCUG00000024773	POLR1E	99	82.254	Oryctolagus_cuniculus
ENSNGAG00000002520	Polr1e	94	44.175	ENSORLG00000005143	polr1e	99	44.175	Oryzias_latipes
ENSNGAG00000002520	Polr1e	88	43.557	ENSORLG00020007271	polr1e	99	43.557	Oryzias_latipes_hni
ENSNGAG00000002520	Polr1e	94	43.932	ENSORLG00015000137	polr1e	99	43.932	Oryzias_latipes_hsok
ENSNGAG00000002520	Polr1e	93	42.892	ENSOMEG00000013264	polr1e	96	42.892	Oryzias_melastigma
ENSNGAG00000002520	Polr1e	97	84.634	ENSOGAG00000012981	POLR1E	99	84.634	Otolemur_garnettii
ENSNGAG00000002520	Polr1e	97	82.660	ENSOARG00000011465	POLR1E	97	82.660	Ovis_aries
ENSNGAG00000002520	Polr1e	96	82.734	ENSPPAG00000034566	POLR1E	99	86.486	Pan_paniscus
ENSNGAG00000002520	Polr1e	96	83.971	ENSPPRG00000005649	POLR1E	99	83.971	Panthera_pardus
ENSNGAG00000002520	Polr1e	96	83.971	ENSPTIG00000009774	POLR1E	99	83.971	Panthera_tigris_altaica
ENSNGAG00000002520	Polr1e	96	82.734	ENSPTRG00000020944	POLR1E	99	86.486	Pan_troglodytes
ENSNGAG00000002520	Polr1e	96	82.494	ENSPANG00000025563	POLR1E	99	86.486	Papio_anubis
ENSNGAG00000002520	Polr1e	94	48.558	ENSPKIG00000003562	polr1e	99	48.558	Paramormyrops_kingsleyae
ENSNGAG00000002520	Polr1e	88	62.924	ENSPSIG00000003274	POLR1E	90	62.924	Pelodiscus_sinensis
ENSNGAG00000002520	Polr1e	91	43.284	ENSPMGG00000024169	polr1e	96	43.284	Periophthalmus_magnuspinnatus
ENSNGAG00000002520	Polr1e	100	68.046	ENSPEMG00000022300	-	100	68.046	Peromyscus_maniculatus_bairdii
ENSNGAG00000002520	Polr1e	100	84.101	ENSPEMG00000019151	-	100	84.101	Peromyscus_maniculatus_bairdii
ENSNGAG00000002520	Polr1e	91	72.980	ENSPCIG00000014798	POLR1E	97	72.980	Phascolarctos_cinereus
ENSNGAG00000002520	Polr1e	94	42.989	ENSPFOG00000019627	polr1e	98	42.989	Poecilia_formosa
ENSNGAG00000002520	Polr1e	94	45.255	ENSPLAG00000022679	polr1e	98	45.255	Poecilia_latipinna
ENSNGAG00000002520	Polr1e	82	45.556	ENSPMEG00000022123	polr1e	93	45.556	Poecilia_mexicana
ENSNGAG00000002520	Polr1e	93	45.098	ENSPREG00000009470	polr1e	98	45.098	Poecilia_reticulata
ENSNGAG00000002520	Polr1e	96	82.014	ENSPPYG00000019061	POLR1E	99	82.014	Pongo_abelii
ENSNGAG00000002520	Polr1e	54	82.203	ENSPCAG00000004891	POLR1E	77	82.203	Procavia_capensis
ENSNGAG00000002520	Polr1e	96	84.173	ENSPCOG00000027448	POLR1E	99	84.173	Propithecus_coquereli
ENSNGAG00000002520	Polr1e	91	87.563	ENSPVAG00000007940	POLR1E	83	87.563	Pteropus_vampyrus
ENSNGAG00000002520	Polr1e	94	45.255	ENSPNYG00000001032	polr1e	97	45.255	Pundamilia_nyererei
ENSNGAG00000002520	Polr1e	94	43.552	ENSPNAG00000006987	polr1e	99	43.552	Pygocentrus_nattereri
ENSNGAG00000002520	Polr1e	100	83.410	ENSRNOG00000012664	Polr1e	100	83.410	Rattus_norvegicus
ENSNGAG00000002520	Polr1e	93	81.235	ENSRBIG00000034214	POLR1E	100	82.415	Rhinopithecus_bieti
ENSNGAG00000002520	Polr1e	96	82.014	ENSRROG00000031986	POLR1E	99	86.486	Rhinopithecus_roxellana
ENSNGAG00000002520	Polr1e	96	82.254	ENSSBOG00000021415	POLR1E	99	82.254	Saimiri_boliviensis_boliviensis
ENSNGAG00000002520	Polr1e	82	70.752	ENSSHAG00000016084	POLR1E	99	70.752	Sarcophilus_harrisii
ENSNGAG00000002520	Polr1e	95	48.309	ENSSFOG00015002293	polr1e	99	48.309	Scleropages_formosus
ENSNGAG00000002520	Polr1e	99	46.330	ENSSMAG00000011672	polr1e	97	46.330	Scophthalmus_maximus
ENSNGAG00000002520	Polr1e	93	46.814	ENSSDUG00000022279	polr1e	97	46.814	Seriola_dumerili
ENSNGAG00000002520	Polr1e	93	46.324	ENSSLDG00000024918	polr1e	97	46.324	Seriola_lalandi_dorsalis
ENSNGAG00000002520	Polr1e	62	71.983	ENSSARG00000009810	-	67	71.983	Sorex_araneus
ENSNGAG00000002520	Polr1e	94	64.563	ENSSPUG00000009499	POLR1E	99	64.563	Sphenodon_punctatus
ENSNGAG00000002520	Polr1e	94	45.985	ENSSPAG00000021240	polr1e	98	45.985	Stegastes_partitus
ENSNGAG00000002520	Polr1e	96	85.407	ENSSSCG00000005347	POLR1E	99	85.407	Sus_scrofa
ENSNGAG00000002520	Polr1e	91	52.144	ENSTGUG00000007169	POLR1E	99	52.144	Taeniopygia_guttata
ENSNGAG00000002520	Polr1e	94	42.857	ENSTRUG00000020779	polr1e	99	43.832	Takifugu_rubripes
ENSNGAG00000002520	Polr1e	94	43.447	ENSTNIG00000017812	polr1e	98	43.447	Tetraodon_nigroviridis
ENSNGAG00000002520	Polr1e	91	86.041	ENSTBEG00000013786	POLR1E	84	86.041	Tupaia_belangeri
ENSNGAG00000002520	Polr1e	91	87.406	ENSTTRG00000008294	POLR1E	84	87.406	Tursiops_truncatus
ENSNGAG00000002520	Polr1e	96	85.167	ENSUAMG00000012474	POLR1E	99	86.575	Ursus_americanus
ENSNGAG00000002520	Polr1e	96	85.167	ENSUMAG00000011496	POLR1E	99	85.167	Ursus_maritimus
ENSNGAG00000002520	Polr1e	79	80.645	ENSVPAG00000009048	POLR1E	81	80.645	Vicugna_pacos
ENSNGAG00000002520	Polr1e	96	86.571	ENSVVUG00000019954	POLR1E	99	86.571	Vulpes_vulpes
ENSNGAG00000002520	Polr1e	95	50.602	ENSXETG00000006533	polr1e	99	50.602	Xenopus_tropicalis
ENSNGAG00000002520	Polr1e	93	44.363	ENSXCOG00000013706	polr1e	98	44.363	Xiphophorus_couchianus
ENSNGAG00000002520	Polr1e	93	45.833	ENSXMAG00000012484	polr1e	98	45.833	Xiphophorus_maculatus