EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000002549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 7291 bases
Position: chrKL199352.1:2881911-2889201
Accession: 103728836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002679	zf-C2H2	PF00096.26	4.8e-25	1	4
ENSNGAP00000002679	zf-C2H2	PF00096.26	4.8e-25	2	4
ENSNGAP00000002679	zf-C2H2	PF00096.26	4.8e-25	3	4
ENSNGAP00000002679	zf-C2H2	PF00096.26	4.8e-25	4	4
ENSNGAP00000002679	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000003303	-	1315	XM_008826831	ENSNGAP00000002679	135 (aa)	XP_008825053	UPI0000ECFA75

Gene Model

Click here to download ENSNGAG00000002549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000002549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000002549	-	99	42.636	ENSNGAG00000001555	Zfp574	51	42.636
ENSNGAG00000002549	-	100	89.630	ENSNGAG00000003333	Gfi1b	64	72.024
ENSNGAG00000002549	-	100	44.615	ENSNGAG00000019853	Zfp39	64	44.615
ENSNGAG00000002549	-	100	51.613	ENSNGAG00000024130	-	98	51.613
ENSNGAG00000002549	-	100	47.368	ENSNGAG00000018331	Zfp64	64	38.298
ENSNGAG00000002549	-	100	47.899	ENSNGAG00000000088	Gm3854	66	47.899
ENSNGAG00000002549	-	100	44.037	ENSNGAG00000016891	Zfp317	67	44.037
ENSNGAG00000002549	-	99	47.761	ENSNGAG00000014357	Zfp661	64	47.761
ENSNGAG00000002549	-	99	47.368	ENSNGAG00000016004	Zfp865	71	41.975
ENSNGAG00000002549	-	100	48.062	ENSNGAG00000012888	Zfp628	52	48.062
ENSNGAG00000002549	-	100	47.407	ENSNGAG00000015897	Zfp560	64	47.407
ENSNGAG00000002549	-	100	45.455	ENSNGAG00000016319	Zfp1	60	45.455
ENSNGAG00000002549	-	100	50.746	ENSNGAG00000020695	Zfp26	69	50.746
ENSNGAG00000002549	-	99	49.515	ENSNGAG00000019166	Zfp94	72	49.515
ENSNGAG00000002549	-	100	39.535	ENSNGAG00000022587	Zfp319	85	39.535
ENSNGAG00000002549	-	100	41.071	ENSNGAG00000020815	Scrt2	65	41.071
ENSNGAG00000002549	-	100	44.776	ENSNGAG00000016559	-	69	44.776
ENSNGAG00000002549	-	99	44.444	ENSNGAG00000011802	Zfp784	65	44.444
ENSNGAG00000002549	-	99	46.269	ENSNGAG00000015777	Zim1	62	46.269
ENSNGAG00000002549	-	100	48.031	ENSNGAG00000010473	-	64	48.031
ENSNGAG00000002549	-	100	35.227	ENSNGAG00000007174	Ovol2	51	35.227
ENSNGAG00000002549	-	99	43.411	ENSNGAG00000014809	2610008E11Rik	80	43.411
ENSNGAG00000002549	-	100	46.237	ENSNGAG00000011056	Zfp236	56	46.739
ENSNGAG00000002549	-	100	43.590	ENSNGAG00000020281	Zfp637	71	43.590
ENSNGAG00000002549	-	100	54.321	ENSNGAG00000017870	Zfp768	50	53.488
ENSNGAG00000002549	-	100	36.842	ENSNGAG00000009442	-	52	36.842
ENSNGAG00000002549	-	99	45.133	ENSNGAG00000018317	Prdm5	74	43.846
ENSNGAG00000002549	-	100	48.819	ENSNGAG00000011769	Zfp354a	70	48.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000002549	-	100	100.000	ENSAMEG00000013858	-	92	100.000	Ailuropoda_melanoleuca
ENSNGAG00000002549	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSNGAG00000002549	-	100	100.000	ENSAPLG00000015700	GFI1	50	100.000	Anas_platyrhynchos
ENSNGAG00000002549	-	84	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSNGAG00000002549	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSNGAG00000002549	-	99	93.284	ENSAMXG00000006669	GFI1	54	93.284	Astyanax_mexicanus
ENSNGAG00000002549	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSNGAG00000002549	-	100	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSNGAG00000002549	-	99	78.358	ENSCING00000011342	-	71	78.358	Ciona_intestinalis
ENSNGAG00000002549	-	100	79.259	ENSCSAVG00000005904	-	83	79.259	Ciona_savignyi
ENSNGAG00000002549	-	100	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSNGAG00000002549	-	100	100.000	ENSDORG00000023443	-	100	100.000	Dipodomys_ordii
ENSNGAG00000002549	-	100	100.000	ENSFDAG00000019296	-	100	100.000	Fukomys_damarensis
ENSNGAG00000002549	-	100	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSNGAG00000002549	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSNGAG00000002549	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSNGAG00000002549	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSNGAG00000002549	-	100	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSNGAG00000002549	-	100	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSNGAG00000002549	-	100	100.000	ENSMOCG00000004478	-	100	100.000	Microtus_ochrogaster
ENSNGAG00000002549	-	100	95.556	ENSMMOG00000005556	gfi1ab	62	95.556	Mola_mola
ENSNGAG00000002549	-	100	100.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSNGAG00000002549	-	100	100.000	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSNGAG00000002549	-	84	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSNGAG00000002549	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSNGAG00000002549	-	100	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSNGAG00000002549	-	100	98.519	ENSOANG00000022289	-	72	98.519	Ornithorhynchus_anatinus
ENSNGAG00000002549	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSNGAG00000002549	-	100	97.778	ENSPMGG00000012546	gfi1ab	73	97.778	Periophthalmus_magnuspinnatus
ENSNGAG00000002549	-	100	97.778	ENSPLAG00000010879	gfi1ab	55	97.778	Poecilia_latipinna
ENSNGAG00000002549	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSNGAG00000002549	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSNGAG00000002549	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSNGAG00000002549	-	100	97.778	ENSSPAG00000009140	gfi1ab	58	97.778	Stegastes_partitus
ENSNGAG00000002549	-	100	100.000	ENSTGUG00000006060	GFI1	58	100.000	Taeniopygia_guttata
ENSNGAG00000002549	-	100	100.000	ENSUMAG00000011251	-	100	100.000	Ursus_maritimus
ENSNGAG00000002549	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSNGAG00000002549	-	96	64.667	ENSXMAG00000006527	-	50	64.667	Xiphophorus_maculatus