EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000002725 (Gene tree)
Gene ID: 103733668
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 1935 bases
Position: chrKL200594.1:785241-787175
Accession: 103733668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000002764	Exo_endo_phos	PF03372.23	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000003509	-	957	XM_008832558	ENSNGAP00000002764	318 (aa)	XP_008830780	UPI0004ED3707

Gene Model

Click here to download ENSNGAG00000002725's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000002725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000002725	-	100	74.528	ENSNGAG00000021748	-	99	74.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000002725	-	100	93.082	ENSG00000100823	APEX1	100	93.082	Homo_sapiens
ENSNGAG00000002725	-	88	68.817	ENSAPOG00000017002	apex1	98	65.886	Acanthochromis_polyacanthus
ENSNGAG00000002725	-	100	94.969	ENSAMEG00000005418	APEX1	100	94.969	Ailuropoda_melanoleuca
ENSNGAG00000002725	-	87	71.014	ENSACIG00000010653	apex1	97	69.204	Amphilophus_citrinellus
ENSNGAG00000002725	-	87	69.203	ENSAOCG00000009649	apex1	93	67.474	Amphiprion_ocellaris
ENSNGAG00000002725	-	87	69.203	ENSAPEG00000021453	apex1	93	67.474	Amphiprion_percula
ENSNGAG00000002725	-	99	66.456	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSNGAG00000002725	-	100	71.118	ENSACAG00000008099	APEX1	100	71.118	Anolis_carolinensis
ENSNGAG00000002725	-	100	93.711	ENSANAG00000030117	APEX1	100	93.711	Aotus_nancymaae
ENSNGAG00000002725	-	87	71.377	ENSACLG00000018441	apex1	99	65.823	Astatotilapia_calliptera
ENSNGAG00000002725	-	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSNGAG00000002725	-	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSNGAG00000002725	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSNGAG00000002725	-	100	93.711	ENSCJAG00000009726	APEX1	100	93.711	Callithrix_jacchus
ENSNGAG00000002725	-	100	93.711	ENSCAFG00000032033	APEX1	100	93.711	Canis_familiaris
ENSNGAG00000002725	-	100	93.711	ENSCAFG00020014377	-	100	93.711	Canis_lupus_dingo
ENSNGAG00000002725	-	54	89.535	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSNGAG00000002725	-	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSNGAG00000002725	-	100	92.767	ENSCHIG00000007298	-	100	92.767	Capra_hircus
ENSNGAG00000002725	-	100	93.082	ENSTSYG00000034813	APEX1	100	93.082	Carlito_syrichta
ENSNGAG00000002725	-	85	88.930	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSNGAG00000002725	-	100	93.396	ENSCPOG00000030909	APEX1	100	93.396	Cavia_porcellus
ENSNGAG00000002725	-	100	93.711	ENSCCAG00000033056	-	100	93.711	Cebus_capucinus
ENSNGAG00000002725	-	100	80.503	ENSCCAG00000031931	-	100	80.503	Cebus_capucinus
ENSNGAG00000002725	-	100	92.767	ENSCATG00000015580	APEX1	100	92.767	Cercocebus_atys
ENSNGAG00000002725	-	100	94.340	ENSCLAG00000001002	APEX1	100	94.340	Chinchilla_lanigera
ENSNGAG00000002725	-	100	92.453	ENSCSAG00000016670	-	100	92.453	Chlorocebus_sabaeus
ENSNGAG00000002725	-	100	92.453	ENSCSAG00000016685	-	100	92.453	Chlorocebus_sabaeus
ENSNGAG00000002725	-	100	69.906	ENSCPBG00000009567	APEX1	100	69.906	Chrysemys_picta_bellii
ENSNGAG00000002725	-	92	53.691	ENSCING00000008137	-	95	53.691	Ciona_intestinalis
ENSNGAG00000002725	-	99	47.188	ENSCSAVG00000007144	-	100	52.124	Ciona_savignyi
ENSNGAG00000002725	-	100	93.082	ENSCANG00000030726	APEX1	100	93.082	Colobus_angolensis_palliatus
ENSNGAG00000002725	-	100	90.881	ENSCGRG00001017046	Apex1	100	90.881	Cricetulus_griseus_chok1gshd
ENSNGAG00000002725	-	100	90.881	ENSCGRG00000008984	Apex1	100	90.881	Cricetulus_griseus_crigri
ENSNGAG00000002725	-	99	64.669	ENSCSEG00000017499	apex1	99	64.669	Cynoglossus_semilaevis
ENSNGAG00000002725	-	99	66.139	ENSCVAG00000022075	apex1	99	67.508	Cyprinodon_variegatus
ENSNGAG00000002725	-	100	65.409	ENSDARG00000045843	apex1	100	65.409	Danio_rerio
ENSNGAG00000002725	-	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSNGAG00000002725	-	100	93.082	ENSDORG00000001616	Apex1	100	93.082	Dipodomys_ordii
ENSNGAG00000002725	-	100	91.824	ENSETEG00000004855	-	100	91.824	Echinops_telfairi
ENSNGAG00000002725	-	75	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSNGAG00000002725	-	100	94.654	ENSEASG00005017489	APEX1	74	94.654	Equus_asinus_asinus
ENSNGAG00000002725	-	100	94.654	ENSECAG00000022325	APEX1	82	94.654	Equus_caballus
ENSNGAG00000002725	-	91	92.361	ENSEEUG00000012569	APEX1	100	92.361	Erinaceus_europaeus
ENSNGAG00000002725	-	100	64.465	ENSELUG00000021706	apex1	100	65.409	Esox_lucius
ENSNGAG00000002725	-	100	95.597	ENSFCAG00000030869	APEX1	100	95.597	Felis_catus
ENSNGAG00000002725	-	100	93.396	ENSFDAG00000006120	APEX1	100	93.396	Fukomys_damarensis
ENSNGAG00000002725	-	99	67.405	ENSFHEG00000009031	apex1	83	67.405	Fundulus_heteroclitus
ENSNGAG00000002725	-	99	61.321	ENSGMOG00000007943	apex1	99	61.321	Gadus_morhua
ENSNGAG00000002725	-	87	72.464	ENSGAFG00000005311	apex1	99	66.772	Gambusia_affinis
ENSNGAG00000002725	-	99	65.931	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSNGAG00000002725	-	100	69.279	ENSGAGG00000014999	APEX1	100	69.279	Gopherus_agassizii
ENSNGAG00000002725	-	100	93.082	ENSGGOG00000002128	APEX1	100	93.082	Gorilla_gorilla
ENSNGAG00000002725	-	99	65.506	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSNGAG00000002725	-	100	94.969	ENSHGLG00000002848	APEX1	100	94.969	Heterocephalus_glaber_female
ENSNGAG00000002725	-	100	94.969	ENSHGLG00100017878	APEX1	100	94.969	Heterocephalus_glaber_male
ENSNGAG00000002725	-	99	66.038	ENSHCOG00000009961	apex1	99	66.038	Hippocampus_comes
ENSNGAG00000002725	-	100	68.025	ENSIPUG00000005799	apex1	100	68.025	Ictalurus_punctatus
ENSNGAG00000002725	-	100	93.396	ENSSTOG00000010096	APEX1	100	93.396	Ictidomys_tridecemlineatus
ENSNGAG00000002725	-	94	85.235	ENSJJAG00000020465	-	96	85.235	Jaculus_jaculus
ENSNGAG00000002725	-	100	92.767	ENSJJAG00000012067	-	100	92.767	Jaculus_jaculus
ENSNGAG00000002725	-	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSNGAG00000002725	-	99	65.506	ENSKMAG00000021171	apex1	99	65.506	Kryptolebias_marmoratus
ENSNGAG00000002725	-	88	67.742	ENSLBEG00000010248	apex1	99	64.669	Labrus_bergylta
ENSNGAG00000002725	-	100	66.978	ENSLACG00000008617	APEX1	100	66.978	Latimeria_chalumnae
ENSNGAG00000002725	-	100	66.149	ENSLOCG00000015516	apex1	99	66.149	Lepisosteus_oculatus
ENSNGAG00000002725	-	100	91.195	ENSLAFG00000021872	APEX1	100	91.195	Loxodonta_africana
ENSNGAG00000002725	-	100	92.767	ENSMFAG00000002565	APEX1	100	92.767	Macaca_fascicularis
ENSNGAG00000002725	-	100	92.767	ENSMMUG00000048039	APEX1	100	92.767	Macaca_mulatta
ENSNGAG00000002725	-	100	92.767	ENSMNEG00000036944	APEX1	100	92.767	Macaca_nemestrina
ENSNGAG00000002725	-	100	92.767	ENSMLEG00000042125	APEX1	100	92.767	Mandrillus_leucophaeus
ENSNGAG00000002725	-	99	67.508	ENSMAMG00000023526	apex1	99	68.139	Mastacembelus_armatus
ENSNGAG00000002725	-	87	71.377	ENSMZEG00005014187	apex1	99	65.823	Maylandia_zebra
ENSNGAG00000002725	-	100	91.509	ENSMAUG00000013994	Apex1	100	91.509	Mesocricetus_auratus
ENSNGAG00000002725	-	100	94.340	ENSMICG00000043554	APEX1	100	94.340	Microcebus_murinus
ENSNGAG00000002725	-	100	93.082	ENSMOCG00000013721	Apex1	100	93.082	Microtus_ochrogaster
ENSNGAG00000002725	-	87	67.870	ENSMMOG00000010031	apex1	97	63.208	Mola_mola
ENSNGAG00000002725	-	100	83.750	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSNGAG00000002725	-	88	63.441	ENSMALG00000011699	apex1	85	59.048	Monopterus_albus
ENSNGAG00000002725	-	99	94.322	MGP_CAROLIEiJ_G0019209	Apex1	99	94.322	Mus_caroli
ENSNGAG00000002725	-	100	94.969	ENSMUSG00000035960	Apex1	100	94.969	Mus_musculus
ENSNGAG00000002725	-	100	94.340	MGP_PahariEiJ_G0030232	Apex1	100	94.340	Mus_pahari
ENSNGAG00000002725	-	100	94.969	MGP_SPRETEiJ_G0020101	Apex1	100	94.969	Mus_spretus
ENSNGAG00000002725	-	100	93.438	ENSMLUG00000028957	APEX1	100	93.438	Myotis_lucifugus
ENSNGAG00000002725	-	87	71.014	ENSNBRG00000005334	apex1	91	65.506	Neolamprologus_brichardi
ENSNGAG00000002725	-	100	93.396	ENSNLEG00000010839	APEX1	100	93.396	Nomascus_leucogenys
ENSNGAG00000002725	-	100	86.164	ENSMEUG00000014519	APEX1	100	86.164	Notamacropus_eugenii
ENSNGAG00000002725	-	100	92.453	ENSOPRG00000014029	APEX1	100	92.453	Ochotona_princeps
ENSNGAG00000002725	-	100	71.296	ENSODEG00000006583	-	100	71.296	Octodon_degus
ENSNGAG00000002725	-	97	75.405	ENSODEG00000004777	-	99	75.405	Octodon_degus
ENSNGAG00000002725	-	100	94.969	ENSODEG00000001703	-	100	94.969	Octodon_degus
ENSNGAG00000002725	-	87	71.223	ENSONIG00000012089	apex1	99	66.139	Oreochromis_niloticus
ENSNGAG00000002725	-	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSNGAG00000002725	-	100	93.396	ENSOCUG00000005022	APEX1	100	93.396	Oryctolagus_cuniculus
ENSNGAG00000002725	-	99	66.352	ENSORLG00000012378	apex1	99	67.296	Oryzias_latipes
ENSNGAG00000002725	-	99	66.352	ENSORLG00020021371	apex1	99	67.296	Oryzias_latipes_hni
ENSNGAG00000002725	-	99	66.352	ENSORLG00015020089	apex1	99	67.296	Oryzias_latipes_hsok
ENSNGAG00000002725	-	99	66.038	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSNGAG00000002725	-	100	93.082	ENSOGAG00000013335	-	100	93.082	Otolemur_garnettii
ENSNGAG00000002725	-	98	82.692	ENSOGAG00000029355	-	100	82.692	Otolemur_garnettii
ENSNGAG00000002725	-	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSNGAG00000002725	-	100	92.138	ENSOARG00000019740	-	100	92.138	Ovis_aries
ENSNGAG00000002725	-	99	78.481	ENSOARG00000014424	-	100	78.481	Ovis_aries
ENSNGAG00000002725	-	100	93.396	ENSPPAG00000038760	APEX1	100	93.396	Pan_paniscus
ENSNGAG00000002725	-	100	95.283	ENSPPRG00000011794	APEX1	100	95.283	Panthera_pardus
ENSNGAG00000002725	-	100	95.597	ENSPTIG00000014829	APEX1	100	95.597	Panthera_tigris_altaica
ENSNGAG00000002725	-	100	93.396	ENSPTRG00000006093	APEX1	100	93.396	Pan_troglodytes
ENSNGAG00000002725	-	100	92.767	ENSPANG00000022757	APEX1	100	92.767	Papio_anubis
ENSNGAG00000002725	-	87	68.478	ENSPKIG00000003504	apex1	100	63.551	Paramormyrops_kingsleyae
ENSNGAG00000002725	-	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSNGAG00000002725	-	100	94.340	ENSPEMG00000019097	Apex1	100	94.340	Peromyscus_maniculatus_bairdii
ENSNGAG00000002725	-	94	64.333	ENSPMAG00000007275	-	99	64.333	Petromyzon_marinus
ENSNGAG00000002725	-	100	83.386	ENSPCIG00000023274	APEX1	100	85.358	Phascolarctos_cinereus
ENSNGAG00000002725	-	87	72.826	ENSPFOG00000004178	apex1	99	66.772	Poecilia_formosa
ENSNGAG00000002725	-	87	72.464	ENSPLAG00000012779	apex1	99	68.139	Poecilia_latipinna
ENSNGAG00000002725	-	87	72.826	ENSPMEG00000019623	apex1	99	66.772	Poecilia_mexicana
ENSNGAG00000002725	-	87	72.464	ENSPREG00000014298	apex1	99	66.456	Poecilia_reticulata
ENSNGAG00000002725	-	100	92.767	ENSPPYG00000005565	APEX1	100	92.767	Pongo_abelii
ENSNGAG00000002725	-	100	89.623	ENSPCAG00000010376	APEX1	100	89.623	Procavia_capensis
ENSNGAG00000002725	-	100	94.340	ENSPCOG00000021564	APEX1	100	94.340	Propithecus_coquereli
ENSNGAG00000002725	-	100	93.438	ENSPVAG00000010736	APEX1	100	93.438	Pteropus_vampyrus
ENSNGAG00000002725	-	87	71.377	ENSPNYG00000023940	apex1	99	65.823	Pundamilia_nyererei
ENSNGAG00000002725	-	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSNGAG00000002725	-	100	94.340	ENSRNOG00000009663	Apex1	100	94.340	Rattus_norvegicus
ENSNGAG00000002725	-	100	92.767	ENSRBIG00000038325	APEX1	99	92.767	Rhinopithecus_bieti
ENSNGAG00000002725	-	100	79.245	ENSSBOG00000031372	-	100	79.365	Saimiri_boliviensis_boliviensis
ENSNGAG00000002725	-	100	93.396	ENSSBOG00000018921	-	100	93.396	Saimiri_boliviensis_boliviensis
ENSNGAG00000002725	-	100	82.716	ENSSHAG00000013524	APEX1	100	83.742	Sarcophilus_harrisii
ENSNGAG00000002725	-	100	61.950	ENSSFOG00015001948	apex1	100	61.321	Scleropages_formosus
ENSNGAG00000002725	-	87	69.928	ENSSMAG00000013348	apex1	99	64.557	Scophthalmus_maximus
ENSNGAG00000002725	-	99	64.557	ENSSDUG00000016377	apex1	99	64.557	Seriola_dumerili
ENSNGAG00000002725	-	99	65.190	ENSSLDG00000023005	apex1	99	65.190	Seriola_lalandi_dorsalis
ENSNGAG00000002725	-	95	70.432	ENSSPUG00000000531	APEX1	99	70.432	Sphenodon_punctatus
ENSNGAG00000002725	-	99	65.506	ENSSPAG00000000458	apex1	99	65.506	Stegastes_partitus
ENSNGAG00000002725	-	100	94.340	ENSSSCG00000040060	-	100	94.340	Sus_scrofa
ENSNGAG00000002725	-	96	55.484	ENSSSCG00000039705	-	99	57.285	Sus_scrofa
ENSNGAG00000002725	-	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSNGAG00000002725	-	87	68.116	ENSTRUG00000004268	apex1	95	62.975	Takifugu_rubripes
ENSNGAG00000002725	-	99	63.291	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSNGAG00000002725	-	100	89.308	ENSTBEG00000006405	APEX1	100	89.308	Tupaia_belangeri
ENSNGAG00000002725	-	74	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSNGAG00000002725	-	100	94.340	ENSUAMG00000010457	APEX1	100	94.340	Ursus_americanus
ENSNGAG00000002725	-	100	94.340	ENSUMAG00000009178	APEX1	100	94.340	Ursus_maritimus
ENSNGAG00000002725	-	74	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSNGAG00000002725	-	100	93.711	ENSVVUG00000009010	APEX1	100	93.711	Vulpes_vulpes
ENSNGAG00000002725	-	100	66.144	ENSXETG00000024773	apex1	100	66.144	Xenopus_tropicalis
ENSNGAG00000002725	-	87	72.464	ENSXCOG00000015233	apex1	99	67.089	Xiphophorus_couchianus
ENSNGAG00000002725	-	93	67.427	ENSXMAG00000006195	apex1	99	67.089	Xiphophorus_maculatus