EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000003333 (Gene tree)
Gene ID: 103742834
Gene Symbol: Gfi1b
Alias: Gfi-1B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 13703 bases
Position: chrKL202719.1:1886667-1900369
Accession: 103742834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003102	zf-C2H2	PF00096.26	5.7e-28	1	5
ENSNGAP00000003102	zf-C2H2	PF00096.26	5.7e-28	2	5
ENSNGAP00000003102	zf-C2H2	PF00096.26	5.7e-28	3	5
ENSNGAP00000003102	zf-C2H2	PF00096.26	5.7e-28	4	5
ENSNGAP00000003102	zf-C2H2	PF00096.26	5.7e-28	5	5
ENSNGAP00000003117	zf-C2H2	PF00096.26	1.2e-27	1	5
ENSNGAP00000003117	zf-C2H2	PF00096.26	1.2e-27	2	5
ENSNGAP00000003117	zf-C2H2	PF00096.26	1.2e-27	3	5
ENSNGAP00000003117	zf-C2H2	PF00096.26	1.2e-27	4	5
ENSNGAP00000003117	zf-C2H2	PF00096.26	1.2e-27	5	5
ENSNGAP00000003111	zf-C2H2	PF00096.26	3.2e-20	1	4
ENSNGAP00000003111	zf-C2H2	PF00096.26	3.2e-20	2	4
ENSNGAP00000003111	zf-C2H2	PF00096.26	3.2e-20	3	4
ENSNGAP00000003111	zf-C2H2	PF00096.26	3.2e-20	4	4
ENSNGAP00000003111	zf-met	PF12874.7	4.1e-07	1	1
ENSNGAP00000003102	zf-met	PF12874.7	6e-07	1	1
ENSNGAP00000003117	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000004236	-	984	-	ENSNGAP00000003111	327 (aa)	-	-
ENSNGAT00000004246	-	1083	-	ENSNGAP00000003117	360 (aa)	-	-
ENSNGAT00000004225	-	1052	XM_008843947	ENSNGAP00000003102	327 (aa)	XP_008842169	-

Gene Model

Click here to download ENSNGAG00000003333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000003333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000003333	Gfi1b	51	40.541	ENSNGAG00000020815	Scrt2	83	45.098
ENSNGAG00000003333	Gfi1b	55	44.898	ENSNGAG00000015897	Zfp560	65	44.898
ENSNGAG00000003333	Gfi1b	57	35.802	ENSNGAG00000002579	Zfp646	52	35.802
ENSNGAG00000003333	Gfi1b	63	37.037	ENSNGAG00000022587	Zfp319	91	38.194
ENSNGAG00000003333	Gfi1b	54	36.986	ENSNGAG00000018114	Zfp526	51	36.424
ENSNGAG00000003333	Gfi1b	64	72.024	ENSNGAG00000002549	-	100	89.630
ENSNGAG00000003333	Gfi1b	59	47.115	ENSNGAG00000016319	Zfp1	67	43.478
ENSNGAG00000003333	Gfi1b	66	38.208	ENSNGAG00000020695	Zfp26	72	44.571
ENSNGAG00000003333	Gfi1b	56	46.753	ENSNGAG00000016004	Zfp865	84	36.047
ENSNGAG00000003333	Gfi1b	90	45.122	ENSNGAG00000011769	Zfp354a	98	45.122
ENSNGAG00000003333	Gfi1b	56	40.517	ENSNGAG00000018331	Zfp64	69	39.286
ENSNGAG00000003333	Gfi1b	76	41.975	ENSNGAG00000011802	Zfp784	80	41.975
ENSNGAG00000003333	Gfi1b	59	43.269	ENSNGAG00000000088	Gm3854	66	44.720
ENSNGAG00000003333	Gfi1b	73	42.236	ENSNGAG00000016559	-	79	42.236
ENSNGAG00000003333	Gfi1b	56	32.847	ENSNGAG00000009442	-	78	33.898
ENSNGAG00000003333	Gfi1b	69	41.718	ENSNGAG00000014809	2610008E11Rik	80	41.718
ENSNGAG00000003333	Gfi1b	92	46.541	ENSNGAG00000019166	Zfp94	81	46.541
ENSNGAG00000003333	Gfi1b	86	42.857	ENSNGAG00000011056	Zfp236	66	42.857
ENSNGAG00000003333	Gfi1b	61	43.750	ENSNGAG00000018317	Prdm5	78	40.972
ENSNGAG00000003333	Gfi1b	75	48.718	ENSNGAG00000017666	Mynn	51	48.718
ENSNGAG00000003333	Gfi1b	59	46.087	ENSNGAG00000010473	-	71	45.342
ENSNGAG00000003333	Gfi1b	55	44.286	ENSNGAG00000024130	-	98	44.286
ENSNGAG00000003333	Gfi1b	59	44.538	ENSNGAG00000014357	Zfp661	64	44.099
ENSNGAG00000003333	Gfi1b	56	37.647	ENSNGAG00000017185	Snai1	97	37.647
ENSNGAG00000003333	Gfi1b	66	42.683	ENSNGAG00000001555	Zfp574	62	45.283
ENSNGAG00000003333	Gfi1b	69	37.736	ENSNGAG00000022025	Zfp423	62	39.474
ENSNGAG00000003333	Gfi1b	60	44.578	ENSNGAG00000012888	Zfp628	51	46.626
ENSNGAG00000003333	Gfi1b	58	44.134	ENSNGAG00000019853	Zfp39	64	44.134
ENSNGAG00000003333	Gfi1b	66	40.000	ENSNGAG00000015777	Zim1	64	40.000
ENSNGAG00000003333	Gfi1b	57	50.000	ENSNGAG00000017870	Zfp768	51	50.588
ENSNGAG00000003333	Gfi1b	59	40.580	ENSNGAG00000016891	Zfp317	65	43.478
ENSNGAG00000003333	Gfi1b	61	41.880	ENSNGAG00000020281	Zfp637	73	41.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000003333	Gfi1b	100	59.760	ENSAPOG00000001296	gfi1b	99	59.760	Acanthochromis_polyacanthus
ENSNGAG00000003333	Gfi1b	99	58.232	ENSACIG00000002190	gfi1b	99	58.232	Amphilophus_citrinellus
ENSNGAG00000003333	Gfi1b	100	60.661	ENSAOCG00000021187	gfi1b	99	60.661	Amphiprion_ocellaris
ENSNGAG00000003333	Gfi1b	100	60.360	ENSAPEG00000016196	gfi1b	99	60.360	Amphiprion_percula
ENSNGAG00000003333	Gfi1b	100	58.580	ENSATEG00000002534	gfi1b	100	57.738	Anabas_testudineus
ENSNGAG00000003333	Gfi1b	100	69.139	ENSAPLG00000003373	GFI1B	99	69.139	Anas_platyrhynchos
ENSNGAG00000003333	Gfi1b	100	56.637	ENSACLG00000027053	gfi1b	99	56.637	Astatotilapia_calliptera
ENSNGAG00000003333	Gfi1b	100	62.353	ENSAMXG00000037544	GFI1B	99	62.353	Astyanax_mexicanus
ENSNGAG00000003333	Gfi1b	100	80.387	ENSCAPG00000010404	GFI1B	99	80.387	Cavia_aperea
ENSNGAG00000003333	Gfi1b	100	68.023	ENSCPBG00000021186	GFI1B	99	68.023	Chrysemys_picta_bellii
ENSNGAG00000003333	Gfi1b	100	57.396	ENSCSEG00000001315	gfi1b	99	57.396	Cynoglossus_semilaevis
ENSNGAG00000003333	Gfi1b	100	59.639	ENSCVAG00000017168	gfi1b	99	59.639	Cyprinodon_variegatus
ENSNGAG00000003333	Gfi1b	100	59.654	ENSDARG00000079947	gfi1b	99	75.745	Danio_rerio
ENSNGAG00000003333	Gfi1b	61	98.276	ENSEEUG00000012609	-	75	98.276	Erinaceus_europaeus
ENSNGAG00000003333	Gfi1b	100	59.292	ENSELUG00000016933	gfi1b	100	58.358	Esox_lucius
ENSNGAG00000003333	Gfi1b	100	65.041	ENSFALG00000001479	GFI1B	99	65.041	Ficedula_albicollis
ENSNGAG00000003333	Gfi1b	100	58.876	ENSFHEG00000015138	gfi1b	99	58.876	Fundulus_heteroclitus
ENSNGAG00000003333	Gfi1b	100	58.485	ENSGMOG00000019123	gfi1b	99	58.485	Gadus_morhua
ENSNGAG00000003333	Gfi1b	100	68.915	ENSGALG00000003478	GFI1B	100	68.035	Gallus_gallus
ENSNGAG00000003333	Gfi1b	72	72.034	ENSGAFG00000003059	gfi1b	100	72.034	Gambusia_affinis
ENSNGAG00000003333	Gfi1b	100	56.657	ENSGACG00000018134	gfi1b	99	56.657	Gasterosteus_aculeatus
ENSNGAG00000003333	Gfi1b	100	71.084	ENSGAGG00000021327	GFI1B	99	71.084	Gopherus_agassizii
ENSNGAG00000003333	Gfi1b	100	56.637	ENSHBUG00000005451	gfi1b	99	56.637	Haplochromis_burtoni
ENSNGAG00000003333	Gfi1b	100	60.843	ENSHCOG00000013713	gfi1b	99	61.818	Hippocampus_comes
ENSNGAG00000003333	Gfi1b	100	61.834	ENSIPUG00000012769	gfi1b	100	61.062	Ictalurus_punctatus
ENSNGAG00000003333	Gfi1b	100	86.575	ENSJJAG00000016355	Gfi1b	100	86.575	Jaculus_jaculus
ENSNGAG00000003333	Gfi1b	100	60.778	ENSKMAG00000016047	gfi1b	99	60.778	Kryptolebias_marmoratus
ENSNGAG00000003333	Gfi1b	100	58.507	ENSLBEG00000020297	gfi1b	99	58.507	Labrus_bergylta
ENSNGAG00000003333	Gfi1b	100	62.573	ENSLACG00000012207	GFI1B	99	62.573	Latimeria_chalumnae
ENSNGAG00000003333	Gfi1b	100	61.988	ENSLOCG00000005750	gfi1b	99	61.988	Lepisosteus_oculatus
ENSNGAG00000003333	Gfi1b	100	84.195	ENSLAFG00000022367	GFI1B	99	84.195	Loxodonta_africana
ENSNGAG00000003333	Gfi1b	100	58.683	ENSMAMG00000003040	gfi1b	99	58.683	Mastacembelus_armatus
ENSNGAG00000003333	Gfi1b	99	56.805	ENSMZEG00005015594	gfi1b	99	56.805	Maylandia_zebra
ENSNGAG00000003333	Gfi1b	100	70.118	ENSMGAG00000006129	GFI1B	99	70.118	Meleagris_gallopavo
ENSNGAG00000003333	Gfi1b	100	59.524	ENSMMOG00000011764	gfi1b	99	59.524	Mola_mola
ENSNGAG00000003333	Gfi1b	100	74.238	ENSMODG00000012600	GFI1B	99	74.238	Monodelphis_domestica
ENSNGAG00000003333	Gfi1b	100	59.697	ENSMALG00000004034	gfi1b	99	59.697	Monopterus_albus
ENSNGAG00000003333	Gfi1b	100	58.383	ENSNBRG00000012391	gfi1b	99	58.383	Neolamprologus_brichardi
ENSNGAG00000003333	Gfi1b	56	49.701	ENSNBRG00000012376	-	99	61.940	Neolamprologus_brichardi
ENSNGAG00000003333	Gfi1b	100	58.084	ENSONIG00000013011	gfi1b	100	79.330	Oreochromis_niloticus
ENSNGAG00000003333	Gfi1b	100	71.254	ENSOANG00000014723	GFI1B	99	71.254	Ornithorhynchus_anatinus
ENSNGAG00000003333	Gfi1b	100	90.265	ENSORLG00000014390	GFI1B	96	50.714	Oryzias_latipes
ENSNGAG00000003333	Gfi1b	100	58.788	ENSORLG00020003719	GFI1B	99	58.788	Oryzias_latipes_hni
ENSNGAG00000003333	Gfi1b	100	58.485	ENSORLG00015017142	gfi1b	99	58.485	Oryzias_latipes_hsok
ENSNGAG00000003333	Gfi1b	100	59.639	ENSOMEG00000015149	GFI1B	99	59.639	Oryzias_melastigma
ENSNGAG00000003333	Gfi1b	100	82.424	ENSOGAG00000008879	GFI1B	99	82.424	Otolemur_garnettii
ENSNGAG00000003333	Gfi1b	100	60.882	ENSPKIG00000007643	gfi1b	99	60.882	Paramormyrops_kingsleyae
ENSNGAG00000003333	Gfi1b	100	69.971	ENSPSIG00000012112	GFI1B	99	69.971	Pelodiscus_sinensis
ENSNGAG00000003333	Gfi1b	99	58.683	ENSPMGG00000006021	gfi1b	99	59.281	Periophthalmus_magnuspinnatus
ENSNGAG00000003333	Gfi1b	100	73.077	ENSPCIG00000019724	GFI1B	99	73.077	Phascolarctos_cinereus
ENSNGAG00000003333	Gfi1b	100	58.651	ENSPFOG00000003460	gfi1b	99	58.651	Poecilia_formosa
ENSNGAG00000003333	Gfi1b	100	58.841	ENSPLAG00000017181	GFI1B	99	58.841	Poecilia_latipinna
ENSNGAG00000003333	Gfi1b	100	59.292	ENSPLAG00000021960	GFI1B	99	59.292	Poecilia_latipinna
ENSNGAG00000003333	Gfi1b	100	59.292	ENSPMEG00000019220	gfi1b	99	59.292	Poecilia_mexicana
ENSNGAG00000003333	Gfi1b	100	59.292	ENSPMEG00000001556	GFI1B	99	59.292	Poecilia_mexicana
ENSNGAG00000003333	Gfi1b	100	58.997	ENSPREG00000021718	gfi1b	99	58.997	Poecilia_reticulata
ENSNGAG00000003333	Gfi1b	100	54.810	ENSPNYG00000018422	gfi1b	100	54.810	Pundamilia_nyererei
ENSNGAG00000003333	Gfi1b	100	62.315	ENSPNAG00000021118	gfi1b	99	62.315	Pygocentrus_nattereri
ENSNGAG00000003333	Gfi1b	100	69.890	ENSSHAG00000006462	GFI1B	99	69.890	Sarcophilus_harrisii
ENSNGAG00000003333	Gfi1b	98	49.533	ENSSFOG00015011566	gfi1b	89	55.208	Scleropages_formosus
ENSNGAG00000003333	Gfi1b	100	59.941	ENSSMAG00000015181	gfi1b	99	59.760	Scophthalmus_maximus
ENSNGAG00000003333	Gfi1b	100	59.940	ENSSDUG00000011604	gfi1b	99	59.940	Seriola_dumerili
ENSNGAG00000003333	Gfi1b	100	60.241	ENSSLDG00000013823	gfi1b	99	60.241	Seriola_lalandi_dorsalis
ENSNGAG00000003333	Gfi1b	100	60.174	ENSSPUG00000016039	GFI1B	100	59.767	Sphenodon_punctatus
ENSNGAG00000003333	Gfi1b	100	60.060	ENSSPAG00000022914	gfi1b	99	60.060	Stegastes_partitus
ENSNGAG00000003333	Gfi1b	69	62.791	ENSTGUG00000015953	-	89	62.791	Taeniopygia_guttata
ENSNGAG00000003333	Gfi1b	56	94.737	ENSTGUG00000005282	-	100	94.737	Taeniopygia_guttata
ENSNGAG00000003333	Gfi1b	100	58.610	ENSTRUG00000004525	gfi1b	99	58.610	Takifugu_rubripes
ENSNGAG00000003333	Gfi1b	100	58.006	ENSTNIG00000003834	gfi1b	100	57.229	Tetraodon_nigroviridis
ENSNGAG00000003333	Gfi1b	89	96.552	ENSTBEG00000014459	GFI1B	83	96.552	Tupaia_belangeri
ENSNGAG00000003333	Gfi1b	100	63.717	ENSXETG00000006263	gfi1b	99	64.565	Xenopus_tropicalis
ENSNGAG00000003333	Gfi1b	100	59.587	ENSXMAG00000027589	gfi1b	99	59.587	Xiphophorus_maculatus