EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000003365 (Gene tree)
Gene ID: 103742278
Gene Symbol: Prpf6
Alias: 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 56301 bases
Position: chrKL202617.1:3190676-3246976
Accession: 103742278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003138	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000004289	-	3053	XM_008843316	ENSNGAP00000003138	941 (aa)	XP_008841538	UPI0004ED5033

Gene Model

Click here to download ENSNGAG00000003365's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000003365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000003365	Prpf6	100	98.193	ENSG00000101161	PRPF6	100	98.193	Homo_sapiens
ENSNGAG00000003365	Prpf6	100	93.305	ENSAPOG00000010395	prpf6	96	93.730	Acanthochromis_polyacanthus
ENSNGAG00000003365	Prpf6	100	97.665	ENSAMEG00000001916	PRPF6	99	97.665	Ailuropoda_melanoleuca
ENSNGAG00000003365	Prpf6	100	92.986	ENSACIG00000019862	prpf6	96	93.411	Amphilophus_citrinellus
ENSNGAG00000003365	Prpf6	100	93.199	ENSAOCG00000012988	prpf6	96	93.624	Amphiprion_ocellaris
ENSNGAG00000003365	Prpf6	100	86.504	ENSAPEG00000008301	prpf6	100	87.035	Amphiprion_percula
ENSNGAG00000003365	Prpf6	100	92.667	ENSATEG00000005581	prpf6	96	93.092	Anabas_testudineus
ENSNGAG00000003365	Prpf6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSNGAG00000003365	Prpf6	100	98.300	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSNGAG00000003365	Prpf6	100	92.880	ENSACLG00000025875	prpf6	96	93.305	Astatotilapia_calliptera
ENSNGAG00000003365	Prpf6	99	93.191	ENSAMXG00000001929	prpf6	96	93.617	Astyanax_mexicanus
ENSNGAG00000003365	Prpf6	100	98.512	ENSBTAG00000011656	PRPF6	100	98.512	Bos_taurus
ENSNGAG00000003365	Prpf6	100	98.300	ENSCJAG00000010616	PRPF6	100	98.300	Callithrix_jacchus
ENSNGAG00000003365	Prpf6	100	98.725	ENSCAFG00000013165	PRPF6	100	98.725	Canis_familiaris
ENSNGAG00000003365	Prpf6	100	98.725	ENSCAFG00020002050	PRPF6	100	98.725	Canis_lupus_dingo
ENSNGAG00000003365	Prpf6	100	98.512	ENSCHIG00000018187	PRPF6	100	98.512	Capra_hircus
ENSNGAG00000003365	Prpf6	100	98.937	ENSTSYG00000007814	PRPF6	100	98.937	Carlito_syrichta
ENSNGAG00000003365	Prpf6	97	98.582	ENSCAPG00000015077	PRPF6	100	98.582	Cavia_aperea
ENSNGAG00000003365	Prpf6	100	99.894	ENSCPOG00000007518	PRPF6	100	99.894	Cavia_porcellus
ENSNGAG00000003365	Prpf6	100	95.112	ENSCCAG00000024564	PRPF6	100	95.112	Cebus_capucinus
ENSNGAG00000003365	Prpf6	100	98.087	ENSCATG00000037473	PRPF6	100	98.087	Cercocebus_atys
ENSNGAG00000003365	Prpf6	100	95.855	ENSCLAG00000003854	PRPF6	100	95.855	Chinchilla_lanigera
ENSNGAG00000003365	Prpf6	100	93.031	ENSCSAG00000016742	PRPF6	100	93.031	Chlorocebus_sabaeus
ENSNGAG00000003365	Prpf6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSNGAG00000003365	Prpf6	100	98.406	ENSCPBG00000013964	PRPF6	96	98.406	Chrysemys_picta_bellii
ENSNGAG00000003365	Prpf6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSNGAG00000003365	Prpf6	100	98.087	ENSCANG00000038230	PRPF6	100	98.087	Colobus_angolensis_palliatus
ENSNGAG00000003365	Prpf6	100	99.681	ENSCGRG00001022666	Prpf6	100	99.681	Cricetulus_griseus_chok1gshd
ENSNGAG00000003365	Prpf6	100	87.460	ENSCSEG00000018561	prpf6	100	87.885	Cynoglossus_semilaevis
ENSNGAG00000003365	Prpf6	100	93.199	ENSCVAG00000010550	prpf6	96	93.624	Cyprinodon_variegatus
ENSNGAG00000003365	Prpf6	100	92.774	ENSDARG00000091367	prpf6	99	93.199	Danio_rerio
ENSNGAG00000003365	Prpf6	100	97.875	ENSDNOG00000040544	PRPF6	100	97.875	Dasypus_novemcinctus
ENSNGAG00000003365	Prpf6	91	98.481	ENSDORG00000005406	Prpf6	100	98.481	Dipodomys_ordii
ENSNGAG00000003365	Prpf6	99	72.013	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSNGAG00000003365	Prpf6	85	95.906	ENSETEG00000004447	PRPF6	85	95.906	Echinops_telfairi
ENSNGAG00000003365	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSNGAG00000003365	Prpf6	100	98.725	ENSEASG00005023115	PRPF6	100	98.725	Equus_asinus_asinus
ENSNGAG00000003365	Prpf6	100	94.474	ENSECAG00000013983	PRPF6	100	94.474	Equus_caballus
ENSNGAG00000003365	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSNGAG00000003365	Prpf6	100	91.711	ENSELUG00000001945	prpf6	93	91.711	Esox_lucius
ENSNGAG00000003365	Prpf6	100	98.725	ENSFCAG00000001183	PRPF6	100	98.725	Felis_catus
ENSNGAG00000003365	Prpf6	100	90.648	ENSFALG00000006046	-	97	90.648	Ficedula_albicollis
ENSNGAG00000003365	Prpf6	100	98.300	ENSFALG00000010326	-	97	98.300	Ficedula_albicollis
ENSNGAG00000003365	Prpf6	100	98.406	ENSFDAG00000006451	PRPF6	100	99.887	Fukomys_damarensis
ENSNGAG00000003365	Prpf6	100	93.836	ENSFHEG00000000560	prpf6	96	93.836	Fundulus_heteroclitus
ENSNGAG00000003365	Prpf6	100	89.641	ENSGMOG00000015622	prpf6	99	89.641	Gadus_morhua
ENSNGAG00000003365	Prpf6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSNGAG00000003365	Prpf6	100	88.523	ENSGAFG00000021109	prpf6	96	88.948	Gambusia_affinis
ENSNGAG00000003365	Prpf6	100	91.711	ENSGACG00000002576	prpf6	99	91.711	Gasterosteus_aculeatus
ENSNGAG00000003365	Prpf6	100	98.300	ENSGAGG00000008653	PRPF6	96	98.300	Gopherus_agassizii
ENSNGAG00000003365	Prpf6	100	98.193	ENSGGOG00000016876	PRPF6	100	98.193	Gorilla_gorilla
ENSNGAG00000003365	Prpf6	100	92.880	ENSHBUG00000004496	prpf6	96	93.305	Haplochromis_burtoni
ENSNGAG00000003365	Prpf6	100	99.681	ENSHGLG00000009222	PRPF6	100	99.681	Heterocephalus_glaber_female
ENSNGAG00000003365	Prpf6	97	99.673	ENSHGLG00100016600	PRPF6	100	99.673	Heterocephalus_glaber_male
ENSNGAG00000003365	Prpf6	100	91.711	ENSHCOG00000011513	prpf6	96	92.136	Hippocampus_comes
ENSNGAG00000003365	Prpf6	100	93.730	ENSIPUG00000004912	prpf6	96	93.730	Ictalurus_punctatus
ENSNGAG00000003365	Prpf6	100	96.921	ENSSTOG00000002922	PRPF6	100	96.921	Ictidomys_tridecemlineatus
ENSNGAG00000003365	Prpf6	100	99.681	ENSJJAG00000000836	Prpf6	100	99.681	Jaculus_jaculus
ENSNGAG00000003365	Prpf6	100	92.667	ENSKMAG00000017800	prpf6	96	93.092	Kryptolebias_marmoratus
ENSNGAG00000003365	Prpf6	100	92.349	ENSLBEG00000012582	prpf6	96	92.349	Labrus_bergylta
ENSNGAG00000003365	Prpf6	100	94.899	ENSLOCG00000004827	prpf6	96	93.943	Lepisosteus_oculatus
ENSNGAG00000003365	Prpf6	100	97.981	ENSLAFG00000005272	PRPF6	100	97.981	Loxodonta_africana
ENSNGAG00000003365	Prpf6	100	98.087	ENSMFAG00000037542	PRPF6	100	98.087	Macaca_fascicularis
ENSNGAG00000003365	Prpf6	100	91.507	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSNGAG00000003365	Prpf6	100	83.792	ENSMNEG00000045555	PRPF6	100	83.792	Macaca_nemestrina
ENSNGAG00000003365	Prpf6	100	92.986	ENSMAMG00000010718	prpf6	96	93.411	Mastacembelus_armatus
ENSNGAG00000003365	Prpf6	94	92.404	ENSMZEG00005026539	prpf6	100	92.857	Maylandia_zebra
ENSNGAG00000003365	Prpf6	100	92.357	ENSMZEG00005015261	-	99	92.781	Maylandia_zebra
ENSNGAG00000003365	Prpf6	97	98.255	ENSMGAG00000006634	PRPF6	100	98.255	Meleagris_gallopavo
ENSNGAG00000003365	Prpf6	100	99.787	ENSMAUG00000013969	Prpf6	100	99.787	Mesocricetus_auratus
ENSNGAG00000003365	Prpf6	87	98.418	ENSMICG00000017793	PRPF6	99	98.418	Microcebus_murinus
ENSNGAG00000003365	Prpf6	100	99.681	ENSMOCG00000001701	Prpf6	100	99.681	Microtus_ochrogaster
ENSNGAG00000003365	Prpf6	100	92.030	ENSMMOG00000020419	prpf6	100	92.455	Mola_mola
ENSNGAG00000003365	Prpf6	99	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSNGAG00000003365	Prpf6	99	93.126	ENSMALG00000000089	prpf6	100	93.126	Monopterus_albus
ENSNGAG00000003365	Prpf6	100	93.092	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSNGAG00000003365	Prpf6	100	99.787	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSNGAG00000003365	Prpf6	100	99.787	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSNGAG00000003365	Prpf6	100	99.787	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSNGAG00000003365	Prpf6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSNGAG00000003365	Prpf6	100	92.986	ENSNBRG00000015025	prpf6	96	93.411	Neolamprologus_brichardi
ENSNGAG00000003365	Prpf6	100	98.087	ENSNLEG00000010208	PRPF6	100	98.087	Nomascus_leucogenys
ENSNGAG00000003365	Prpf6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSNGAG00000003365	Prpf6	100	93.624	ENSODEG00000004841	PRPF6	100	93.624	Octodon_degus
ENSNGAG00000003365	Prpf6	100	92.880	ENSONIG00000017406	prpf6	96	93.305	Oreochromis_niloticus
ENSNGAG00000003365	Prpf6	100	98.618	ENSOANG00000004920	PRPF6	100	98.618	Ornithorhynchus_anatinus
ENSNGAG00000003365	Prpf6	99	97.210	ENSOCUG00000014151	PRPF6	100	97.210	Oryctolagus_cuniculus
ENSNGAG00000003365	Prpf6	100	92.667	ENSORLG00000009592	prpf6	96	92.667	Oryzias_latipes
ENSNGAG00000003365	Prpf6	100	92.774	ENSORLG00020001458	prpf6	96	92.774	Oryzias_latipes_hni
ENSNGAG00000003365	Prpf6	100	92.774	ENSORLG00015018762	prpf6	96	92.774	Oryzias_latipes_hsok
ENSNGAG00000003365	Prpf6	100	92.667	ENSOMEG00000012174	prpf6	96	93.092	Oryzias_melastigma
ENSNGAG00000003365	Prpf6	100	91.401	ENSOGAG00000007573	PRPF6	100	91.401	Otolemur_garnettii
ENSNGAG00000003365	Prpf6	100	98.087	ENSOARG00000008776	PRPF6	99	98.087	Ovis_aries
ENSNGAG00000003365	Prpf6	100	98.193	ENSPPAG00000008686	PRPF6	100	98.193	Pan_paniscus
ENSNGAG00000003365	Prpf6	100	98.618	ENSPPRG00000008497	PRPF6	100	98.618	Panthera_pardus
ENSNGAG00000003365	Prpf6	97	98.582	ENSPTIG00000011184	PRPF6	97	98.582	Panthera_tigris_altaica
ENSNGAG00000003365	Prpf6	100	98.193	ENSPTRG00000013765	PRPF6	100	98.193	Pan_troglodytes
ENSNGAG00000003365	Prpf6	100	97.556	ENSPANG00000024135	PRPF6	100	97.556	Papio_anubis
ENSNGAG00000003365	Prpf6	100	94.474	ENSPKIG00000005627	prpf6	99	94.899	Paramormyrops_kingsleyae
ENSNGAG00000003365	Prpf6	94	98.526	ENSPSIG00000007717	PRPF6	100	98.526	Pelodiscus_sinensis
ENSNGAG00000003365	Prpf6	100	90.446	ENSPMGG00000008925	prpf6	96	90.658	Periophthalmus_magnuspinnatus
ENSNGAG00000003365	Prpf6	100	99.681	ENSPEMG00000016036	Prpf6	100	99.681	Peromyscus_maniculatus_bairdii
ENSNGAG00000003365	Prpf6	99	88.417	ENSPMAG00000006144	prpf6	99	88.417	Petromyzon_marinus
ENSNGAG00000003365	Prpf6	100	98.725	ENSPCIG00000017909	PRPF6	100	98.725	Phascolarctos_cinereus
ENSNGAG00000003365	Prpf6	100	93.411	ENSPFOG00000006431	prpf6	96	93.836	Poecilia_formosa
ENSNGAG00000003365	Prpf6	100	93.305	ENSPLAG00000005974	prpf6	96	93.730	Poecilia_latipinna
ENSNGAG00000003365	Prpf6	100	93.518	ENSPMEG00000009977	prpf6	96	93.943	Poecilia_mexicana
ENSNGAG00000003365	Prpf6	100	93.411	ENSPREG00000017993	prpf6	92	93.836	Poecilia_reticulata
ENSNGAG00000003365	Prpf6	100	97.662	ENSPPYG00000011256	PRPF6	100	97.662	Pongo_abelii
ENSNGAG00000003365	Prpf6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSNGAG00000003365	Prpf6	100	98.406	ENSPCOG00000016881	PRPF6	100	98.406	Propithecus_coquereli
ENSNGAG00000003365	Prpf6	100	92.561	ENSPVAG00000014316	PRPF6	100	92.561	Pteropus_vampyrus
ENSNGAG00000003365	Prpf6	100	76.433	ENSPNYG00000001939	prpf6	70	90.209	Pundamilia_nyererei
ENSNGAG00000003365	Prpf6	100	93.518	ENSPNAG00000015606	prpf6	96	93.943	Pygocentrus_nattereri
ENSNGAG00000003365	Prpf6	100	99.681	ENSRNOG00000051498	Prpf6	100	99.681	Rattus_norvegicus
ENSNGAG00000003365	Prpf6	100	98.087	ENSRBIG00000043613	PRPF6	100	98.087	Rhinopithecus_bieti
ENSNGAG00000003365	Prpf6	100	94.921	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSNGAG00000003365	Prpf6	91	93.772	ENSSBOG00000020632	PRPF6	93	93.772	Saimiri_boliviensis_boliviensis
ENSNGAG00000003365	Prpf6	100	98.725	ENSSHAG00000016810	PRPF6	100	98.725	Sarcophilus_harrisii
ENSNGAG00000003365	Prpf6	99	94.737	ENSSFOG00015020859	prpf6	100	95.166	Scleropages_formosus
ENSNGAG00000003365	Prpf6	100	92.242	ENSSMAG00000008112	prpf6	96	92.242	Scophthalmus_maximus
ENSNGAG00000003365	Prpf6	100	92.880	ENSSDUG00000016142	prpf6	96	93.305	Seriola_dumerili
ENSNGAG00000003365	Prpf6	100	92.880	ENSSLDG00000025283	prpf6	100	89.798	Seriola_lalandi_dorsalis
ENSNGAG00000003365	Prpf6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSNGAG00000003365	Prpf6	100	92.880	ENSSPAG00000015850	prpf6	96	93.305	Stegastes_partitus
ENSNGAG00000003365	Prpf6	100	98.618	ENSSSCG00000029119	PRPF6	100	98.526	Sus_scrofa
ENSNGAG00000003365	Prpf6	100	98.406	ENSTGUG00000007221	PRPF6	99	98.406	Taeniopygia_guttata
ENSNGAG00000003365	Prpf6	100	91.817	ENSTRUG00000002920	prpf6	96	92.242	Takifugu_rubripes
ENSNGAG00000003365	Prpf6	100	85.518	ENSTNIG00000017873	prpf6	100	85.941	Tetraodon_nigroviridis
ENSNGAG00000003365	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSNGAG00000003365	Prpf6	100	98.087	ENSTTRG00000013068	PRPF6	100	98.087	Tursiops_truncatus
ENSNGAG00000003365	Prpf6	98	97.174	ENSUMAG00000021631	PRPF6	98	97.174	Ursus_maritimus
ENSNGAG00000003365	Prpf6	100	98.725	ENSVVUG00000014948	PRPF6	100	98.725	Vulpes_vulpes
ENSNGAG00000003365	Prpf6	100	96.387	ENSXETG00000012054	prpf6	97	96.387	Xenopus_tropicalis
ENSNGAG00000003365	Prpf6	100	93.518	ENSXCOG00000008082	prpf6	96	93.943	Xiphophorus_couchianus
ENSNGAG00000003365	Prpf6	100	93.518	ENSXMAG00000015581	prpf6	96	93.943	Xiphophorus_maculatus