EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000003440 (Gene tree)
Gene ID: 103735167
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 5202 bases
Position: chrKL201043.1:1656470-1661671
Accession: 103735167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003169	SRP19	PF01922.17	1.9e-28	1	1
ENSNGAP00000003174	SRP19	PF01922.17	1.8e-14	1	2
ENSNGAP00000003174	SRP19	PF01922.17	1.8e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000004354	-	897	XM_008834310	ENSNGAP00000003169	144 (aa)	XP_008832532	UPI0004ED210F
ENSNGAT00000004367	-	363	-	ENSNGAP00000003174	120 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000003440's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000003440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000003440	-	90	90.769	ENSNGAG00000014524	-	100	90.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000003440	-	100	97.500	ENSG00000153037	SRP19	100	97.500	Homo_sapiens
ENSNGAG00000003440	-	89	70.312	ENSAPOG00000002199	srp19	89	70.312	Acanthochromis_polyacanthus
ENSNGAG00000003440	-	94	96.296	ENSAMEG00000012623	SRP19	92	96.296	Ailuropoda_melanoleuca
ENSNGAG00000003440	-	89	67.969	ENSACIG00000005082	srp19	89	67.969	Amphilophus_citrinellus
ENSNGAG00000003440	-	89	69.531	ENSAOCG00000002718	srp19	90	69.531	Amphiprion_ocellaris
ENSNGAG00000003440	-	89	69.531	ENSAPEG00000022170	srp19	90	69.531	Amphiprion_percula
ENSNGAG00000003440	-	90	69.767	ENSATEG00000012472	srp19	90	70.312	Anabas_testudineus
ENSNGAG00000003440	-	78	85.841	ENSAPLG00000002624	SRP19	93	85.217	Anas_platyrhynchos
ENSNGAG00000003440	-	92	78.195	ENSACAG00000007550	SRP19	92	77.778	Anolis_carolinensis
ENSNGAG00000003440	-	100	97.500	ENSANAG00000032576	-	100	97.500	Aotus_nancymaae
ENSNGAG00000003440	-	90	73.846	ENSANAG00000029862	-	89	85.567	Aotus_nancymaae
ENSNGAG00000003440	-	95	72.993	ENSANAG00000030287	-	97	73.485	Aotus_nancymaae
ENSNGAG00000003440	-	89	66.406	ENSACLG00000006259	srp19	90	66.406	Astatotilapia_calliptera
ENSNGAG00000003440	-	88	66.929	ENSAMXG00000043011	srp19	91	66.667	Astyanax_mexicanus
ENSNGAG00000003440	-	94	95.556	ENSBTAG00000012803	SRP19	94	95.556	Bos_taurus
ENSNGAG00000003440	-	82	50.847	WBGene00018159	F37F2.2	82	50.847	Caenorhabditis_elegans
ENSNGAG00000003440	-	91	72.519	ENSCJAG00000045531	-	85	72.180	Callithrix_jacchus
ENSNGAG00000003440	-	93	96.396	ENSCJAG00000038676	-	93	96.396	Callithrix_jacchus
ENSNGAG00000003440	-	94	95.556	ENSCAFG00000031549	SRP19	94	95.556	Canis_familiaris
ENSNGAG00000003440	-	94	95.556	ENSCAFG00020014267	-	94	95.556	Canis_lupus_dingo
ENSNGAG00000003440	-	64	90.217	ENSCAFG00020004285	-	86	90.625	Canis_lupus_dingo
ENSNGAG00000003440	-	83	95.833	ENSCAFG00020022437	-	93	95.968	Canis_lupus_dingo
ENSNGAG00000003440	-	94	95.556	ENSCHIG00000017551	SRP19	94	95.556	Capra_hircus
ENSNGAG00000003440	-	100	97.500	ENSTSYG00000007875	SRP19	100	97.500	Carlito_syrichta
ENSNGAG00000003440	-	99	75.524	ENSCPOG00000036806	SRP19	80	92.453	Cavia_porcellus
ENSNGAG00000003440	-	92	71.970	ENSCCAG00000029821	-	66	71.970	Cebus_capucinus
ENSNGAG00000003440	-	100	97.500	ENSCCAG00000035651	-	100	97.500	Cebus_capucinus
ENSNGAG00000003440	-	92	76.692	ENSCCAG00000023426	-	87	76.692	Cebus_capucinus
ENSNGAG00000003440	-	94	88.148	ENSCATG00000039250	-	93	88.148	Cercocebus_atys
ENSNGAG00000003440	-	88	80.315	ENSCATG00000040513	-	80	80.000	Cercocebus_atys
ENSNGAG00000003440	-	94	94.074	ENSCLAG00000004791	-	94	94.074	Chinchilla_lanigera
ENSNGAG00000003440	-	94	88.148	ENSCLAG00000016055	-	93	88.148	Chinchilla_lanigera
ENSNGAG00000003440	-	94	96.296	ENSCHOG00000013452	SRP19	94	96.296	Choloepus_hoffmanni
ENSNGAG00000003440	-	90	79.070	ENSCPBG00000013903	SRP19	92	78.626	Chrysemys_picta_bellii
ENSNGAG00000003440	-	94	94.815	ENSCGRG00001020510	Srp19	94	94.815	Cricetulus_griseus_chok1gshd
ENSNGAG00000003440	-	67	88.119	ENSCGRG00000010716	-	89	88.119	Cricetulus_griseus_crigri
ENSNGAG00000003440	-	83	85.000	ENSCGRG00000008542	-	92	85.000	Cricetulus_griseus_crigri
ENSNGAG00000003440	-	89	67.969	ENSCSEG00000010039	srp19	91	67.442	Cynoglossus_semilaevis
ENSNGAG00000003440	-	88	70.079	ENSCVAG00000017621	srp19	89	70.079	Cyprinodon_variegatus
ENSNGAG00000003440	-	88	69.048	ENSDARG00000035699	srp19	90	68.750	Danio_rerio
ENSNGAG00000003440	-	94	94.815	ENSDNOG00000013856	SRP19	94	94.815	Dasypus_novemcinctus
ENSNGAG00000003440	-	71	87.850	ENSDORG00000004746	Srp19	76	93.814	Dipodomys_ordii
ENSNGAG00000003440	-	85	50.407	FBgn0015298	Srp19	75	50.407	Drosophila_melanogaster
ENSNGAG00000003440	-	94	91.111	ENSETEG00000017132	SRP19	94	91.111	Echinops_telfairi
ENSNGAG00000003440	-	81	64.655	ENSEBUG00000006613	srp19	88	62.400	Eptatretus_burgeri
ENSNGAG00000003440	-	94	94.074	ENSEASG00005015182	SRP19	94	94.074	Equus_asinus_asinus
ENSNGAG00000003440	-	94	94.815	ENSEEUG00000007298	SRP19	94	94.815	Erinaceus_europaeus
ENSNGAG00000003440	-	89	71.094	ENSELUG00000007958	srp19	91	70.769	Esox_lucius
ENSNGAG00000003440	-	90	65.891	ENSELUG00000004594	srp19	91	65.891	Esox_lucius
ENSNGAG00000003440	-	100	97.500	ENSFCAG00000025895	SRP19	100	97.500	Felis_catus
ENSNGAG00000003440	-	94	94.074	ENSFDAG00000013543	SRP19	94	94.074	Fukomys_damarensis
ENSNGAG00000003440	-	88	70.079	ENSFHEG00000000493	srp19	89	70.079	Fundulus_heteroclitus
ENSNGAG00000003440	-	83	69.167	ENSGMOG00000003264	srp19	93	69.167	Gadus_morhua
ENSNGAG00000003440	-	92	84.962	ENSGALG00000000218	SRP19	94	84.444	Gallus_gallus
ENSNGAG00000003440	-	87	69.600	ENSGAFG00000015815	srp19	59	70.161	Gambusia_affinis
ENSNGAG00000003440	-	88	70.079	ENSGACG00000001093	srp19	85	70.079	Gasterosteus_aculeatus
ENSNGAG00000003440	-	92	79.699	ENSGAGG00000025305	SRP19	94	79.259	Gopherus_agassizii
ENSNGAG00000003440	-	90	66.923	ENSHBUG00000006131	srp19	90	66.923	Haplochromis_burtoni
ENSNGAG00000003440	-	94	94.815	ENSHGLG00000006075	SRP19	94	94.815	Heterocephalus_glaber_female
ENSNGAG00000003440	-	94	94.815	ENSHGLG00100015859	SRP19	94	94.815	Heterocephalus_glaber_male
ENSNGAG00000003440	-	89	65.625	ENSHCOG00000013231	srp19	90	65.625	Hippocampus_comes
ENSNGAG00000003440	-	90	68.468	ENSIPUG00000025084	srp19	92	68.750	Ictalurus_punctatus
ENSNGAG00000003440	-	93	95.495	ENSSTOG00000000348	SRP19	93	95.495	Ictidomys_tridecemlineatus
ENSNGAG00000003440	-	94	94.074	ENSJJAG00000017185	Srp19	94	94.074	Jaculus_jaculus
ENSNGAG00000003440	-	91	69.466	ENSKMAG00000011155	srp19	92	69.466	Kryptolebias_marmoratus
ENSNGAG00000003440	-	88	69.291	ENSLBEG00000026727	srp19	89	69.291	Labrus_bergylta
ENSNGAG00000003440	-	88	78.571	ENSLACG00000004459	SRP19	82	78.740	Latimeria_chalumnae
ENSNGAG00000003440	-	89	71.875	ENSLOCG00000010302	srp19	91	72.093	Lepisosteus_oculatus
ENSNGAG00000003440	-	94	95.556	ENSLAFG00000002564	SRP19	94	95.556	Loxodonta_africana
ENSNGAG00000003440	-	94	85.926	ENSMFAG00000000554	-	93	85.926	Macaca_fascicularis
ENSNGAG00000003440	-	83	72.269	ENSMFAG00000040055	-	90	72.727	Macaca_fascicularis
ENSNGAG00000003440	-	94	85.926	ENSMMUG00000049186	-	93	85.926	Macaca_mulatta
ENSNGAG00000003440	-	85	80.488	ENSMMUG00000032515	-	92	80.800	Macaca_mulatta
ENSNGAG00000003440	-	94	95.556	ENSMNEG00000038714	SRP19	94	95.556	Macaca_nemestrina
ENSNGAG00000003440	-	83	71.429	ENSMNEG00000040117	-	90	71.901	Macaca_nemestrina
ENSNGAG00000003440	-	89	70.312	ENSMAMG00000018346	srp19	89	70.312	Mastacembelus_armatus
ENSNGAG00000003440	-	90	66.923	ENSMZEG00005001765	srp19	90	66.923	Maylandia_zebra
ENSNGAG00000003440	-	83	85.833	ENSMGAG00000006762	SRP19	93	85.246	Meleagris_gallopavo
ENSNGAG00000003440	-	67	84.536	ENSMICG00000049202	-	91	85.149	Microcebus_murinus
ENSNGAG00000003440	-	94	94.074	ENSMICG00000000399	SRP19	94	94.074	Microcebus_murinus
ENSNGAG00000003440	-	94	95.556	ENSMOCG00000006534	Srp19	94	95.556	Microtus_ochrogaster
ENSNGAG00000003440	-	67	93.814	ENSMOCG00000010532	-	89	93.814	Microtus_ochrogaster
ENSNGAG00000003440	-	92	69.925	ENSMMOG00000010417	srp19	86	69.925	Mola_mola
ENSNGAG00000003440	-	90	90.698	ENSMODG00000013278	SRP19	92	90.076	Monodelphis_domestica
ENSNGAG00000003440	-	88	71.654	ENSMALG00000003858	srp19	89	71.654	Monopterus_albus
ENSNGAG00000003440	-	94	94.815	MGP_CAROLIEiJ_G0022086	Srp19	98	100.000	Mus_caroli
ENSNGAG00000003440	-	94	94.815	ENSMUSG00000014504	Srp19	98	100.000	Mus_musculus
ENSNGAG00000003440	-	94	94.815	MGP_PahariEiJ_G0018820	Srp19	98	97.436	Mus_pahari
ENSNGAG00000003440	-	94	94.815	MGP_SPRETEiJ_G0022998	Srp19	98	100.000	Mus_spretus
ENSNGAG00000003440	-	94	95.556	ENSMPUG00000012695	SRP19	92	95.556	Mustela_putorius_furo
ENSNGAG00000003440	-	94	95.556	ENSMLUG00000014793	-	94	95.556	Myotis_lucifugus
ENSNGAG00000003440	-	86	90.323	ENSMLUG00000024549	-	90	90.400	Myotis_lucifugus
ENSNGAG00000003440	-	94	80.741	ENSNLEG00000035364	-	94	80.741	Nomascus_leucogenys
ENSNGAG00000003440	-	83	92.437	ENSMEUG00000012529	SRP19	93	91.736	Notamacropus_eugenii
ENSNGAG00000003440	-	81	91.453	ENSOPRG00000010549	SRP19	93	90.083	Ochotona_princeps
ENSNGAG00000003440	-	94	76.296	ENSODEG00000013862	-	94	76.296	Octodon_degus
ENSNGAG00000003440	-	91	89.313	ENSODEG00000019119	-	94	88.889	Octodon_degus
ENSNGAG00000003440	-	67	90.722	ENSODEG00000005538	-	85	90.722	Octodon_degus
ENSNGAG00000003440	-	89	66.406	ENSONIG00000000542	srp19	90	66.406	Oreochromis_niloticus
ENSNGAG00000003440	-	88	83.333	ENSOANG00000011139	SRP19	73	83.465	Ornithorhynchus_anatinus
ENSNGAG00000003440	-	94	90.441	ENSOCUG00000015639	SRP19	94	90.441	Oryctolagus_cuniculus
ENSNGAG00000003440	-	90	67.442	ENSORLG00000028267	srp19	92	66.923	Oryzias_latipes
ENSNGAG00000003440	-	90	67.442	ENSORLG00020015201	srp19	92	66.923	Oryzias_latipes_hni
ENSNGAG00000003440	-	90	67.442	ENSORLG00015007525	srp19	92	66.923	Oryzias_latipes_hsok
ENSNGAG00000003440	-	90	68.217	ENSOMEG00000009178	srp19	92	67.692	Oryzias_melastigma
ENSNGAG00000003440	-	94	96.296	ENSOGAG00000008579	SRP19	94	96.296	Otolemur_garnettii
ENSNGAG00000003440	-	94	94.815	ENSOARG00000016066	SRP19	94	94.815	Ovis_aries
ENSNGAG00000003440	-	100	97.500	ENSPPAG00000037062	SRP19	100	97.500	Pan_paniscus
ENSNGAG00000003440	-	100	97.500	ENSPPRG00000015591	SRP19	100	97.500	Panthera_pardus
ENSNGAG00000003440	-	100	97.500	ENSPTIG00000021474	SRP19	100	97.500	Panthera_tigris_altaica
ENSNGAG00000003440	-	100	97.500	ENSPTRG00000017136	SRP19	100	97.500	Pan_troglodytes
ENSNGAG00000003440	-	94	87.407	ENSPANG00000034740	-	93	87.407	Papio_anubis
ENSNGAG00000003440	-	94	95.556	ENSPANG00000004370	-	94	95.556	Papio_anubis
ENSNGAG00000003440	-	89	67.969	ENSPKIG00000018671	srp19	90	67.969	Paramormyrops_kingsleyae
ENSNGAG00000003440	-	83	80.833	ENSPSIG00000013811	SRP19	93	80.328	Pelodiscus_sinensis
ENSNGAG00000003440	-	89	69.531	ENSPMGG00000015313	srp19	90	69.531	Periophthalmus_magnuspinnatus
ENSNGAG00000003440	-	94	91.111	ENSPEMG00000004412	-	93	91.111	Peromyscus_maniculatus_bairdii
ENSNGAG00000003440	-	90	62.308	ENSPMAG00000002685	srp19	91	62.791	Petromyzon_marinus
ENSNGAG00000003440	-	90	91.473	ENSPCIG00000010250	SRP19	91	90.840	Phascolarctos_cinereus
ENSNGAG00000003440	-	88	70.079	ENSPFOG00000015887	srp19	89	70.079	Poecilia_formosa
ENSNGAG00000003440	-	88	70.079	ENSPLAG00000007784	srp19	89	70.079	Poecilia_latipinna
ENSNGAG00000003440	-	88	69.291	ENSPMEG00000003056	srp19	89	69.291	Poecilia_mexicana
ENSNGAG00000003440	-	88	70.079	ENSPREG00000017307	srp19	89	70.079	Poecilia_reticulata
ENSNGAG00000003440	-	94	96.296	ENSPPYG00000029584	SRP19	92	96.296	Pongo_abelii
ENSNGAG00000003440	-	94	77.037	ENSPCAG00000000228	SRP19	94	77.037	Procavia_capensis
ENSNGAG00000003440	-	94	95.556	ENSPCOG00000023239	SRP19	94	95.556	Propithecus_coquereli
ENSNGAG00000003440	-	94	95.556	ENSPVAG00000004895	SRP19	94	95.556	Pteropus_vampyrus
ENSNGAG00000003440	-	88	65.873	ENSPNAG00000009392	srp19	88	67.500	Pygocentrus_nattereri
ENSNGAG00000003440	-	94	94.815	ENSRNOG00000020204	Srp19	94	94.815	Rattus_norvegicus
ENSNGAG00000003440	-	52	89.333	ENSRBIG00000031651	-	83	89.333	Rhinopithecus_bieti
ENSNGAG00000003440	-	94	95.556	ENSRBIG00000015627	-	94	95.556	Rhinopithecus_bieti
ENSNGAG00000003440	-	91	87.156	ENSRBIG00000040440	-	93	85.821	Rhinopithecus_bieti
ENSNGAG00000003440	-	86	75.806	ENSRROG00000037316	-	92	76.423	Rhinopithecus_roxellana
ENSNGAG00000003440	-	91	87.156	ENSRROG00000037054	-	92	87.273	Rhinopithecus_roxellana
ENSNGAG00000003440	-	94	68.889	ENSSBOG00000032685	-	86	77.083	Saimiri_boliviensis_boliviensis
ENSNGAG00000003440	-	100	97.500	ENSSBOG00000028071	-	100	97.500	Saimiri_boliviensis_boliviensis
ENSNGAG00000003440	-	90	72.093	ENSSFOG00015022139	srp19	91	72.093	Scleropages_formosus
ENSNGAG00000003440	-	89	65.625	ENSSMAG00000016803	srp19	89	65.625	Scophthalmus_maximus
ENSNGAG00000003440	-	89	61.871	ENSSDUG00000012930	srp19	90	61.871	Seriola_dumerili
ENSNGAG00000003440	-	61	52.273	ENSSLDG00000021916	-	57	52.857	Seriola_lalandi_dorsalis
ENSNGAG00000003440	-	94	92.593	ENSSARG00000000615	SRP19	94	92.593	Sorex_araneus
ENSNGAG00000003440	-	85	83.740	ENSSPUG00000015769	SRP19	90	83.969	Sphenodon_punctatus
ENSNGAG00000003440	-	94	95.556	ENSSSCG00000026230	SRP19	94	95.556	Sus_scrofa
ENSNGAG00000003440	-	85	85.366	ENSTGUG00000001019	SRP19	92	83.582	Taeniopygia_guttata
ENSNGAG00000003440	-	88	70.769	ENSTRUG00000023119	srp19	90	70.769	Takifugu_rubripes
ENSNGAG00000003440	-	89	69.531	ENSTNIG00000018880	srp19	90	69.531	Tetraodon_nigroviridis
ENSNGAG00000003440	-	94	94.074	ENSTTRG00000001690	SRP19	94	94.074	Tursiops_truncatus
ENSNGAG00000003440	-	91	95.420	ENSUAMG00000000111	SRP19	94	95.556	Ursus_americanus
ENSNGAG00000003440	-	94	95.556	ENSUMAG00000016997	SRP19	94	95.556	Ursus_maritimus
ENSNGAG00000003440	-	94	94.815	ENSVPAG00000006001	SRP19	94	94.815	Vicugna_pacos
ENSNGAG00000003440	-	67	93.814	ENSVVUG00000012423	SRP19	88	95.652	Vulpes_vulpes
ENSNGAG00000003440	-	84	71.074	ENSXETG00000011993	srp19	85	71.074	Xenopus_tropicalis
ENSNGAG00000003440	-	69	65.000	ENSXCOG00000012530	srp19	68	67.368	Xiphophorus_couchianus
ENSNGAG00000003440	-	92	68.939	ENSXMAG00000029788	srp19	89	70.866	Xiphophorus_maculatus