EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000003595 (Gene tree)
Gene ID: 103752403
Gene Symbol: Rpusd1
Alias: 2310051D06Rik
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 4003 bases
Position: chrKL204999.1:461634-465636
Accession: 103752403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003239	PseudoU_synth_2	PF00849.22	7.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000004518	-	1810	XM_008856150	ENSNGAP00000003239	306 (aa)	XP_008854372	UPI0004ED39E8

Gene Model

Click here to download ENSNGAG00000003595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000003595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000003595	Rpusd1	100	82.372	ENSG00000007376	RPUSD1	100	88.095	Homo_sapiens
ENSNGAG00000003595	Rpusd1	98	56.766	ENSAPOG00000022221	rpusd1	98	56.766	Acanthochromis_polyacanthus
ENSNGAG00000003595	Rpusd1	100	83.333	ENSAMEG00000007461	RPUSD1	100	82.680	Ailuropoda_melanoleuca
ENSNGAG00000003595	Rpusd1	93	60.900	ENSACIG00000015863	rpusd1	98	56.863	Amphilophus_citrinellus
ENSNGAG00000003595	Rpusd1	98	55.410	ENSAOCG00000021975	rpusd1	95	55.410	Amphiprion_ocellaris
ENSNGAG00000003595	Rpusd1	98	55.738	ENSAPEG00000001316	rpusd1	95	55.738	Amphiprion_percula
ENSNGAG00000003595	Rpusd1	78	67.364	ENSATEG00000002984	rpusd1	98	57.705	Anabas_testudineus
ENSNGAG00000003595	Rpusd1	78	58.704	ENSAPLG00000012316	RPUSD1	99	58.436	Anas_platyrhynchos
ENSNGAG00000003595	Rpusd1	99	68.647	ENSACAG00000008953	RPUSD1	100	67.857	Anolis_carolinensis
ENSNGAG00000003595	Rpusd1	100	84.295	ENSANAG00000024709	RPUSD1	100	84.615	Aotus_nancymaae
ENSNGAG00000003595	Rpusd1	98	51.453	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSNGAG00000003595	Rpusd1	99	58.416	ENSAMXG00000019802	rpusd1	100	58.416	Astyanax_mexicanus
ENSNGAG00000003595	Rpusd1	100	84.740	ENSBTAG00000000179	RPUSD1	100	86.039	Bos_taurus
ENSNGAG00000003595	Rpusd1	100	84.295	ENSCJAG00000012253	RPUSD1	100	84.295	Callithrix_jacchus
ENSNGAG00000003595	Rpusd1	100	83.333	ENSCAFG00000019614	RPUSD1	100	83.660	Canis_familiaris
ENSNGAG00000003595	Rpusd1	100	83.333	ENSCAFG00020008891	RPUSD1	100	83.660	Canis_lupus_dingo
ENSNGAG00000003595	Rpusd1	100	85.065	ENSCHIG00000012872	RPUSD1	100	86.364	Capra_hircus
ENSNGAG00000003595	Rpusd1	100	83.660	ENSTSYG00000036934	RPUSD1	100	82.848	Carlito_syrichta
ENSNGAG00000003595	Rpusd1	100	88.562	ENSCAPG00000014219	RPUSD1	100	88.562	Cavia_aperea
ENSNGAG00000003595	Rpusd1	100	88.562	ENSCPOG00000034604	RPUSD1	100	88.562	Cavia_porcellus
ENSNGAG00000003595	Rpusd1	100	84.615	ENSCCAG00000034385	RPUSD1	100	84.615	Cebus_capucinus
ENSNGAG00000003595	Rpusd1	100	83.974	ENSCATG00000042983	RPUSD1	100	84.615	Cercocebus_atys
ENSNGAG00000003595	Rpusd1	100	87.908	ENSCLAG00000013966	RPUSD1	100	87.908	Chinchilla_lanigera
ENSNGAG00000003595	Rpusd1	100	84.615	ENSCSAG00000012121	RPUSD1	100	85.256	Chlorocebus_sabaeus
ENSNGAG00000003595	Rpusd1	99	64.918	ENSCPBG00000021101	RPUSD1	99	65.132	Chrysemys_picta_bellii
ENSNGAG00000003595	Rpusd1	92	87.544	ENSCANG00000028576	RPUSD1	98	87.591	Colobus_angolensis_palliatus
ENSNGAG00000003595	Rpusd1	100	90.850	ENSCGRG00001014253	Rpusd1	100	90.850	Cricetulus_griseus_chok1gshd
ENSNGAG00000003595	Rpusd1	100	90.850	ENSCGRG00000017995	Rpusd1	100	90.850	Cricetulus_griseus_crigri
ENSNGAG00000003595	Rpusd1	99	56.209	ENSCSEG00000018512	rpusd1	100	56.209	Cynoglossus_semilaevis
ENSNGAG00000003595	Rpusd1	98	56.536	ENSCVAG00000022746	rpusd1	98	56.811	Cyprinodon_variegatus
ENSNGAG00000003595	Rpusd1	99	61.842	ENSDARG00000060192	rpusd1	100	61.438	Danio_rerio
ENSNGAG00000003595	Rpusd1	100	80.128	ENSDNOG00000003721	RPUSD1	100	81.090	Dasypus_novemcinctus
ENSNGAG00000003595	Rpusd1	100	88.235	ENSDORG00000026656	Rpusd1	100	87.908	Dipodomys_ordii
ENSNGAG00000003595	Rpusd1	97	46.815	ENSEBUG00000008767	rpusd1	93	46.815	Eptatretus_burgeri
ENSNGAG00000003595	Rpusd1	100	82.911	ENSEASG00005018421	RPUSD1	76	83.544	Equus_asinus_asinus
ENSNGAG00000003595	Rpusd1	83	61.024	ENSELUG00000014307	rpusd1	88	53.871	Esox_lucius
ENSNGAG00000003595	Rpusd1	100	82.353	ENSFCAG00000010359	RPUSD1	100	82.353	Felis_catus
ENSNGAG00000003595	Rpusd1	99	66.667	ENSFALG00000003211	RPUSD1	100	66.337	Ficedula_albicollis
ENSNGAG00000003595	Rpusd1	100	87.582	ENSFDAG00000013398	RPUSD1	100	87.582	Fukomys_damarensis
ENSNGAG00000003595	Rpusd1	98	56.436	ENSFHEG00000004736	rpusd1	98	56.436	Fundulus_heteroclitus
ENSNGAG00000003595	Rpusd1	83	63.636	ENSGMOG00000010756	rpusd1	98	55.921	Gadus_morhua
ENSNGAG00000003595	Rpusd1	99	63.578	ENSGALG00000005315	RPUSD1	100	64.262	Gallus_gallus
ENSNGAG00000003595	Rpusd1	98	57.667	ENSGAFG00000009886	rpusd1	98	57.667	Gambusia_affinis
ENSNGAG00000003595	Rpusd1	82	64.542	ENSGACG00000014276	rpusd1	97	56.766	Gasterosteus_aculeatus
ENSNGAG00000003595	Rpusd1	99	64.918	ENSGAGG00000004181	RPUSD1	99	64.803	Gopherus_agassizii
ENSNGAG00000003595	Rpusd1	100	82.051	ENSGGOG00000013997	RPUSD1	100	82.692	Gorilla_gorilla
ENSNGAG00000003595	Rpusd1	83	64.822	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSNGAG00000003595	Rpusd1	100	87.255	ENSHGLG00000002595	RPUSD1	100	87.255	Heterocephalus_glaber_female
ENSNGAG00000003595	Rpusd1	100	87.255	ENSHGLG00100014303	RPUSD1	100	87.255	Heterocephalus_glaber_male
ENSNGAG00000003595	Rpusd1	98	57.807	ENSHCOG00000002390	rpusd1	99	57.807	Hippocampus_comes
ENSNGAG00000003595	Rpusd1	99	61.842	ENSIPUG00000001570	rpusd1	99	61.842	Ictalurus_punctatus
ENSNGAG00000003595	Rpusd1	100	89.869	ENSSTOG00000004276	RPUSD1	100	89.869	Ictidomys_tridecemlineatus
ENSNGAG00000003595	Rpusd1	100	91.503	ENSJJAG00000015696	Rpusd1	100	91.503	Jaculus_jaculus
ENSNGAG00000003595	Rpusd1	98	55.776	ENSKMAG00000017287	rpusd1	98	56.436	Kryptolebias_marmoratus
ENSNGAG00000003595	Rpusd1	98	57.705	ENSLBEG00000013354	RPUSD1	98	56.958	Labrus_bergylta
ENSNGAG00000003595	Rpusd1	98	57.705	ENSLBEG00000022502	rpusd1	98	56.958	Labrus_bergylta
ENSNGAG00000003595	Rpusd1	99	63.245	ENSLACG00000008869	RPUSD1	99	63.245	Latimeria_chalumnae
ENSNGAG00000003595	Rpusd1	71	75.000	ENSLOCG00000005682	rpusd1	99	75.000	Lepisosteus_oculatus
ENSNGAG00000003595	Rpusd1	100	82.353	ENSLAFG00000002115	RPUSD1	100	82.353	Loxodonta_africana
ENSNGAG00000003595	Rpusd1	100	84.295	ENSMFAG00000003961	RPUSD1	100	84.936	Macaca_fascicularis
ENSNGAG00000003595	Rpusd1	100	84.295	ENSMMUG00000000842	RPUSD1	100	84.936	Macaca_mulatta
ENSNGAG00000003595	Rpusd1	100	84.295	ENSMNEG00000042712	RPUSD1	100	84.936	Macaca_nemestrina
ENSNGAG00000003595	Rpusd1	100	84.295	ENSMLEG00000030591	RPUSD1	100	84.936	Mandrillus_leucophaeus
ENSNGAG00000003595	Rpusd1	98	57.190	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSNGAG00000003595	Rpusd1	83	65.217	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSNGAG00000003595	Rpusd1	97	64.333	ENSMGAG00000005447	RPUSD1	100	64.120	Meleagris_gallopavo
ENSNGAG00000003595	Rpusd1	86	83.835	ENSMAUG00000019998	Rpusd1	100	83.835	Mesocricetus_auratus
ENSNGAG00000003595	Rpusd1	100	84.691	ENSMICG00000017561	RPUSD1	100	83.439	Microcebus_murinus
ENSNGAG00000003595	Rpusd1	100	91.503	ENSMOCG00000014082	Rpusd1	100	91.503	Microtus_ochrogaster
ENSNGAG00000003595	Rpusd1	80	65.306	ENSMMOG00000012569	rpusd1	99	57.000	Mola_mola
ENSNGAG00000003595	Rpusd1	100	70.323	ENSMODG00000016882	RPUSD1	100	69.677	Monodelphis_domestica
ENSNGAG00000003595	Rpusd1	98	57.190	ENSMALG00000017818	rpusd1	98	57.843	Monopterus_albus
ENSNGAG00000003595	Rpusd1	100	92.810	MGP_CAROLIEiJ_G0021244	Rpusd1	100	92.810	Mus_caroli
ENSNGAG00000003595	Rpusd1	100	93.137	ENSMUSG00000041199	Rpusd1	100	93.137	Mus_musculus
ENSNGAG00000003595	Rpusd1	100	91.234	MGP_PahariEiJ_G0023562	Rpusd1	100	91.234	Mus_pahari
ENSNGAG00000003595	Rpusd1	100	93.137	MGP_SPRETEiJ_G0022155	Rpusd1	100	93.137	Mus_spretus
ENSNGAG00000003595	Rpusd1	100	81.699	ENSMPUG00000015897	RPUSD1	100	83.007	Mustela_putorius_furo
ENSNGAG00000003595	Rpusd1	100	84.615	ENSMLUG00000001089	RPUSD1	100	85.577	Myotis_lucifugus
ENSNGAG00000003595	Rpusd1	98	57.860	ENSNBRG00000006457	rpusd1	98	57.860	Neolamprologus_brichardi
ENSNGAG00000003595	Rpusd1	55	77.143	ENSNLEG00000008424	-	100	76.571	Nomascus_leucogenys
ENSNGAG00000003595	Rpusd1	100	70.418	ENSMEUG00000016049	RPUSD1	100	70.261	Notamacropus_eugenii
ENSNGAG00000003595	Rpusd1	99	77.303	ENSOPRG00000008340	RPUSD1	99	76.645	Ochotona_princeps
ENSNGAG00000003595	Rpusd1	100	86.275	ENSODEG00000016945	RPUSD1	100	86.275	Octodon_degus
ENSNGAG00000003595	Rpusd1	83	64.427	ENSONIG00000015672	rpusd1	99	56.352	Oreochromis_niloticus
ENSNGAG00000003595	Rpusd1	99	57.616	ENSORLG00000013009	rpusd1	99	57.616	Oryzias_latipes
ENSNGAG00000003595	Rpusd1	99	57.285	ENSORLG00020010382	rpusd1	99	57.285	Oryzias_latipes_hni
ENSNGAG00000003595	Rpusd1	99	56.623	ENSORLG00015021354	rpusd1	99	56.623	Oryzias_latipes_hsok
ENSNGAG00000003595	Rpusd1	98	57.191	ENSOMEG00000021426	rpusd1	98	57.191	Oryzias_melastigma
ENSNGAG00000003595	Rpusd1	100	87.821	ENSOGAG00000003795	RPUSD1	100	87.179	Otolemur_garnettii
ENSNGAG00000003595	Rpusd1	100	84.740	ENSOARG00000014254	RPUSD1	100	86.039	Ovis_aries
ENSNGAG00000003595	Rpusd1	100	82.051	ENSPPAG00000034797	RPUSD1	100	82.692	Pan_paniscus
ENSNGAG00000003595	Rpusd1	100	82.026	ENSPPRG00000012389	RPUSD1	100	81.553	Panthera_pardus
ENSNGAG00000003595	Rpusd1	100	81.699	ENSPTIG00000008545	RPUSD1	92	81.230	Panthera_tigris_altaica
ENSNGAG00000003595	Rpusd1	100	82.051	ENSPTRG00000007565	RPUSD1	100	82.692	Pan_troglodytes
ENSNGAG00000003595	Rpusd1	100	83.654	ENSPANG00000024401	RPUSD1	100	84.295	Papio_anubis
ENSNGAG00000003595	Rpusd1	99	61.364	ENSPKIG00000018890	rpusd1	91	60.197	Paramormyrops_kingsleyae
ENSNGAG00000003595	Rpusd1	99	66.667	ENSPSIG00000013945	RPUSD1	100	66.557	Pelodiscus_sinensis
ENSNGAG00000003595	Rpusd1	98	57.860	ENSPMGG00000014950	rpusd1	99	57.616	Periophthalmus_magnuspinnatus
ENSNGAG00000003595	Rpusd1	100	92.484	ENSPEMG00000000497	Rpusd1	100	92.484	Peromyscus_maniculatus_bairdii
ENSNGAG00000003595	Rpusd1	82	57.937	ENSPMAG00000001563	rpusd1	82	57.937	Petromyzon_marinus
ENSNGAG00000003595	Rpusd1	100	69.649	ENSPCIG00000021216	-	94	70.588	Phascolarctos_cinereus
ENSNGAG00000003595	Rpusd1	98	57.190	ENSPFOG00000007946	rpusd1	98	57.191	Poecilia_formosa
ENSNGAG00000003595	Rpusd1	98	57.190	ENSPLAG00000011925	rpusd1	98	57.191	Poecilia_latipinna
ENSNGAG00000003595	Rpusd1	98	56.863	ENSPMEG00000002910	rpusd1	98	56.856	Poecilia_mexicana
ENSNGAG00000003595	Rpusd1	98	57.843	ENSPREG00000019851	rpusd1	98	58.333	Poecilia_reticulata
ENSNGAG00000003595	Rpusd1	100	66.667	ENSPCAG00000002258	RPUSD1	100	66.667	Procavia_capensis
ENSNGAG00000003595	Rpusd1	100	86.538	ENSPCOG00000022582	RPUSD1	100	86.538	Propithecus_coquereli
ENSNGAG00000003595	Rpusd1	100	82.051	ENSPVAG00000013104	RPUSD1	100	82.692	Pteropus_vampyrus
ENSNGAG00000003595	Rpusd1	83	64.822	ENSPNYG00000024076	rpusd1	98	57.860	Pundamilia_nyererei
ENSNGAG00000003595	Rpusd1	98	58.667	ENSPNAG00000013806	rpusd1	100	57.756	Pygocentrus_nattereri
ENSNGAG00000003595	Rpusd1	100	91.503	ENSRNOG00000023639	Rpusd1	100	91.503	Rattus_norvegicus
ENSNGAG00000003595	Rpusd1	100	83.654	ENSRBIG00000030238	RPUSD1	100	84.295	Rhinopithecus_bieti
ENSNGAG00000003595	Rpusd1	100	83.654	ENSRROG00000036663	RPUSD1	100	84.295	Rhinopithecus_roxellana
ENSNGAG00000003595	Rpusd1	100	83.333	ENSSBOG00000033063	RPUSD1	100	83.987	Saimiri_boliviensis_boliviensis
ENSNGAG00000003595	Rpusd1	100	69.329	ENSSHAG00000013500	RPUSD1	100	70.261	Sarcophilus_harrisii
ENSNGAG00000003595	Rpusd1	99	61.921	ENSSFOG00015014394	rpusd1	99	61.921	Scleropages_formosus
ENSNGAG00000003595	Rpusd1	98	57.705	ENSSMAG00000008045	rpusd1	91	57.705	Scophthalmus_maximus
ENSNGAG00000003595	Rpusd1	98	58.361	ENSSDUG00000001829	rpusd1	95	59.344	Seriola_dumerili
ENSNGAG00000003595	Rpusd1	98	58.361	ENSSLDG00000020853	rpusd1	95	59.344	Seriola_lalandi_dorsalis
ENSNGAG00000003595	Rpusd1	55	88.623	ENSSARG00000011187	-	100	88.623	Sorex_araneus
ENSNGAG00000003595	Rpusd1	63	53.608	ENSSPUG00000005119	-	100	52.083	Sphenodon_punctatus
ENSNGAG00000003595	Rpusd1	98	57.705	ENSSPAG00000012708	rpusd1	98	57.705	Stegastes_partitus
ENSNGAG00000003595	Rpusd1	100	83.333	ENSSSCG00000008000	RPUSD1	98	88.189	Sus_scrofa
ENSNGAG00000003595	Rpusd1	83	74.902	ENSTGUG00000015375	RPUSD1	100	74.902	Taeniopygia_guttata
ENSNGAG00000003595	Rpusd1	98	56.209	ENSTRUG00000003041	rpusd1	98	56.209	Takifugu_rubripes
ENSNGAG00000003595	Rpusd1	98	54.333	ENSTNIG00000002660	rpusd1	99	54.333	Tetraodon_nigroviridis
ENSNGAG00000003595	Rpusd1	100	85.577	ENSTTRG00000010167	RPUSD1	100	84.615	Tursiops_truncatus
ENSNGAG00000003595	Rpusd1	100	82.680	ENSUAMG00000012736	RPUSD1	100	82.680	Ursus_americanus
ENSNGAG00000003595	Rpusd1	100	82.680	ENSUMAG00000021174	RPUSD1	100	82.680	Ursus_maritimus
ENSNGAG00000003595	Rpusd1	100	82.353	ENSVVUG00000012357	RPUSD1	100	81.699	Vulpes_vulpes
ENSNGAG00000003595	Rpusd1	100	60.518	ENSXETG00000007184	rpusd1	100	59.554	Xenopus_tropicalis
ENSNGAG00000003595	Rpusd1	98	57.333	ENSXCOG00000017930	rpusd1	96	59.542	Xiphophorus_couchianus
ENSNGAG00000003595	Rpusd1	98	57.667	ENSXMAG00000024084	rpusd1	98	57.667	Xiphophorus_maculatus