EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000004149 (Gene tree)
Gene ID: 103732356
Gene Symbol: Ccdc12
Alias: 2700094L05Rik
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 61301 bases
Position: chrKL198795.1:783407-844707
Accession: 103732356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003562	cwf18	PF08315.12	1.9e-38	1	1
ENSNGAP00000003568	cwf18	PF08315.12	9.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000005201	-	1818	XM_008830923	ENSNGAP00000003562	166 (aa)	XP_008829145	UPI000819A609
ENSNGAT00000005214	-	480	-	ENSNGAP00000003568	159 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000004149's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000004149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000004149	Ccdc12	100	91.566	ENSG00000160799	CCDC12	100	91.566	Homo_sapiens
ENSNGAG00000004149	Ccdc12	96	70.988	ENSAPOG00000014426	ccdc12	59	70.988	Acanthochromis_polyacanthus
ENSNGAG00000004149	Ccdc12	100	94.578	ENSAMEG00000012658	CCDC12	100	94.578	Ailuropoda_melanoleuca
ENSNGAG00000004149	Ccdc12	68	77.876	ENSACIG00000015192	ccdc12	78	77.273	Amphilophus_citrinellus
ENSNGAG00000004149	Ccdc12	72	76.667	ENSACIG00000022676	-	78	77.273	Amphilophus_citrinellus
ENSNGAG00000004149	Ccdc12	96	71.429	ENSAOCG00000024127	ccdc12	95	71.429	Amphiprion_ocellaris
ENSNGAG00000004149	Ccdc12	96	70.988	ENSAPEG00000009155	ccdc12	84	70.988	Amphiprion_percula
ENSNGAG00000004149	Ccdc12	81	70.370	ENSATEG00000004807	ccdc12	100	70.370	Anabas_testudineus
ENSNGAG00000004149	Ccdc12	81	72.059	ENSAPLG00000005482	CCDC12	80	79.091	Anas_platyrhynchos
ENSNGAG00000004149	Ccdc12	98	74.850	ENSACAG00000004727	CCDC12	85	74.850	Anolis_carolinensis
ENSNGAG00000004149	Ccdc12	81	94.030	ENSANAG00000024483	CCDC12	100	94.030	Aotus_nancymaae
ENSNGAG00000004149	Ccdc12	96	70.370	ENSACLG00000005356	ccdc12	98	70.370	Astatotilapia_calliptera
ENSNGAG00000004149	Ccdc12	93	61.146	ENSACLG00000012742	-	96	61.146	Astatotilapia_calliptera
ENSNGAG00000004149	Ccdc12	96	68.902	ENSAMXG00000016319	ccdc12	98	68.902	Astyanax_mexicanus
ENSNGAG00000004149	Ccdc12	100	89.881	ENSBTAG00000011311	CCDC12	100	90.476	Bos_taurus
ENSNGAG00000004149	Ccdc12	80	39.855	WBGene00022092	Y69A2AR.21	59	42.157	Caenorhabditis_elegans
ENSNGAG00000004149	Ccdc12	100	92.169	ENSCJAG00000002280	CCDC12	100	92.169	Callithrix_jacchus
ENSNGAG00000004149	Ccdc12	100	94.578	ENSCAFG00000013588	CCDC12	100	94.578	Canis_familiaris
ENSNGAG00000004149	Ccdc12	100	94.578	ENSCAFG00020014024	CCDC12	93	94.578	Canis_lupus_dingo
ENSNGAG00000004149	Ccdc12	100	89.286	ENSCHIG00000014512	CCDC12	100	89.881	Capra_hircus
ENSNGAG00000004149	Ccdc12	100	92.169	ENSTSYG00000032837	CCDC12	100	92.169	Carlito_syrichta
ENSNGAG00000004149	Ccdc12	81	74.627	ENSCAPG00000007935	CCDC12	79	96.429	Cavia_aperea
ENSNGAG00000004149	Ccdc12	100	93.976	ENSCPOG00000032515	CCDC12	100	93.976	Cavia_porcellus
ENSNGAG00000004149	Ccdc12	100	92.169	ENSCCAG00000020126	CCDC12	93	92.169	Cebus_capucinus
ENSNGAG00000004149	Ccdc12	100	75.882	ENSCATG00000033681	CCDC12	92	70.690	Cercocebus_atys
ENSNGAG00000004149	Ccdc12	100	94.578	ENSCLAG00000016013	CCDC12	100	94.578	Chinchilla_lanigera
ENSNGAG00000004149	Ccdc12	100	91.566	ENSCSAG00000016154	CCDC12	93	91.566	Chlorocebus_sabaeus
ENSNGAG00000004149	Ccdc12	99	76.506	ENSCPBG00000015804	CCDC12	79	76.506	Chrysemys_picta_bellii
ENSNGAG00000004149	Ccdc12	96	49.701	ENSCING00000005261	-	96	49.102	Ciona_intestinalis
ENSNGAG00000004149	Ccdc12	100	91.566	ENSCANG00000020857	CCDC12	93	91.566	Colobus_angolensis_palliatus
ENSNGAG00000004149	Ccdc12	100	93.976	ENSCGRG00001000459	Ccdc12	100	93.976	Cricetulus_griseus_chok1gshd
ENSNGAG00000004149	Ccdc12	100	93.976	ENSCGRG00000012816	Ccdc12	100	93.976	Cricetulus_griseus_crigri
ENSNGAG00000004149	Ccdc12	96	67.901	ENSCSEG00000004543	ccdc12	98	67.901	Cynoglossus_semilaevis
ENSNGAG00000004149	Ccdc12	81	71.111	ENSCVAG00000011342	ccdc12	100	71.111	Cyprinodon_variegatus
ENSNGAG00000004149	Ccdc12	96	67.500	ENSDARG00000023003	ccdc12	98	67.500	Danio_rerio
ENSNGAG00000004149	Ccdc12	52	70.238	ENSDNOG00000048173	-	86	83.951	Dasypus_novemcinctus
ENSNGAG00000004149	Ccdc12	100	94.578	ENSDORG00000016567	-	100	94.578	Dipodomys_ordii
ENSNGAG00000004149	Ccdc12	100	83.735	ENSDORG00000024399	-	100	83.735	Dipodomys_ordii
ENSNGAG00000004149	Ccdc12	93	44.516	FBgn0039732	CG15525	89	44.516	Drosophila_melanogaster
ENSNGAG00000004149	Ccdc12	68	93.805	ENSETEG00000000030	CCDC12	100	93.805	Echinops_telfairi
ENSNGAG00000004149	Ccdc12	96	61.006	ENSEBUG00000005674	ccdc12	98	59.748	Eptatretus_burgeri
ENSNGAG00000004149	Ccdc12	100	93.976	ENSEASG00005008148	-	69	93.976	Equus_asinus_asinus
ENSNGAG00000004149	Ccdc12	100	88.554	ENSECAG00000008649	CCDC12	100	88.554	Equus_caballus
ENSNGAG00000004149	Ccdc12	96	69.136	ENSELUG00000024105	ccdc12	98	69.136	Esox_lucius
ENSNGAG00000004149	Ccdc12	100	95.181	ENSFCAG00000015474	CCDC12	100	95.181	Felis_catus
ENSNGAG00000004149	Ccdc12	81	70.803	ENSFALG00000001895	CCDC12	68	73.874	Ficedula_albicollis
ENSNGAG00000004149	Ccdc12	99	95.732	ENSFDAG00000002549	CCDC12	99	95.732	Fukomys_damarensis
ENSNGAG00000004149	Ccdc12	96	70.370	ENSFHEG00000016247	ccdc12	91	70.370	Fundulus_heteroclitus
ENSNGAG00000004149	Ccdc12	96	59.627	ENSGMOG00000016901	ccdc12	98	59.627	Gadus_morhua
ENSNGAG00000004149	Ccdc12	87	71.034	ENSGAFG00000006762	ccdc12	98	68.944	Gambusia_affinis
ENSNGAG00000004149	Ccdc12	96	67.081	ENSGACG00000008629	ccdc12	98	67.081	Gasterosteus_aculeatus
ENSNGAG00000004149	Ccdc12	99	77.711	ENSGAGG00000019688	CCDC12	98	77.108	Gopherus_agassizii
ENSNGAG00000004149	Ccdc12	100	91.566	ENSGGOG00000009012	CCDC12	93	91.566	Gorilla_gorilla
ENSNGAG00000004149	Ccdc12	96	70.988	ENSHBUG00000016447	ccdc12	98	70.988	Haplochromis_burtoni
ENSNGAG00000004149	Ccdc12	100	94.578	ENSHGLG00000014058	CCDC12	100	94.578	Heterocephalus_glaber_female
ENSNGAG00000004149	Ccdc12	100	94.578	ENSHGLG00100005918	CCDC12	100	94.578	Heterocephalus_glaber_male
ENSNGAG00000004149	Ccdc12	96	65.644	ENSHCOG00000015164	ccdc12	98	65.031	Hippocampus_comes
ENSNGAG00000004149	Ccdc12	96	68.519	ENSIPUG00000001310	Ccdc12	98	68.519	Ictalurus_punctatus
ENSNGAG00000004149	Ccdc12	100	95.181	ENSSTOG00000003085	CCDC12	100	95.181	Ictidomys_tridecemlineatus
ENSNGAG00000004149	Ccdc12	100	93.976	ENSJJAG00000014918	Ccdc12	100	93.976	Jaculus_jaculus
ENSNGAG00000004149	Ccdc12	96	67.485	ENSKMAG00000013891	ccdc12	98	65.644	Kryptolebias_marmoratus
ENSNGAG00000004149	Ccdc12	96	70.000	ENSLBEG00000024714	ccdc12	85	70.000	Labrus_bergylta
ENSNGAG00000004149	Ccdc12	96	73.750	ENSLOCG00000005683	ccdc12	89	70.625	Lepisosteus_oculatus
ENSNGAG00000004149	Ccdc12	98	85.802	ENSLAFG00000027745	-	100	85.276	Loxodonta_africana
ENSNGAG00000004149	Ccdc12	67	94.643	ENSLAFG00000022573	-	96	94.545	Loxodonta_africana
ENSNGAG00000004149	Ccdc12	100	90.964	ENSMFAG00000002976	CCDC12	93	90.964	Macaca_fascicularis
ENSNGAG00000004149	Ccdc12	100	90.964	ENSMMUG00000019810	CCDC12	93	90.964	Macaca_mulatta
ENSNGAG00000004149	Ccdc12	100	90.964	ENSMNEG00000035785	CCDC12	93	90.964	Macaca_nemestrina
ENSNGAG00000004149	Ccdc12	100	91.566	ENSMLEG00000038060	CCDC12	93	91.566	Mandrillus_leucophaeus
ENSNGAG00000004149	Ccdc12	87	72.603	ENSMAMG00000012165	ccdc12	98	69.753	Mastacembelus_armatus
ENSNGAG00000004149	Ccdc12	93	61.783	ENSMZEG00005019013	-	96	61.783	Maylandia_zebra
ENSNGAG00000004149	Ccdc12	96	70.988	ENSMZEG00005014728	ccdc12	98	70.988	Maylandia_zebra
ENSNGAG00000004149	Ccdc12	80	73.134	ENSMGAG00000002815	CCDC12	100	66.667	Meleagris_gallopavo
ENSNGAG00000004149	Ccdc12	100	92.771	ENSMAUG00000008879	Ccdc12	100	92.771	Mesocricetus_auratus
ENSNGAG00000004149	Ccdc12	100	92.216	ENSMICG00000032886	CCDC12	100	92.814	Microcebus_murinus
ENSNGAG00000004149	Ccdc12	100	92.771	ENSMOCG00000004483	Ccdc12	100	92.771	Microtus_ochrogaster
ENSNGAG00000004149	Ccdc12	67	73.214	ENSMMOG00000001860	ccdc12	75	73.636	Mola_mola
ENSNGAG00000004149	Ccdc12	100	80.357	ENSMODG00000013967	-	100	80.952	Monodelphis_domestica
ENSNGAG00000004149	Ccdc12	100	67.066	ENSMODG00000022615	-	100	67.066	Monodelphis_domestica
ENSNGAG00000004149	Ccdc12	100	67.066	ENSMODG00000025021	-	100	67.066	Monodelphis_domestica
ENSNGAG00000004149	Ccdc12	96	69.136	ENSMALG00000011850	ccdc12	98	69.136	Monopterus_albus
ENSNGAG00000004149	Ccdc12	100	93.373	MGP_CAROLIEiJ_G0032737	-	100	93.373	Mus_caroli
ENSNGAG00000004149	Ccdc12	100	93.373	ENSMUSG00000019659	Ccdc12	100	93.373	Mus_musculus
ENSNGAG00000004149	Ccdc12	100	93.373	MGP_PahariEiJ_G0015604	Ccdc12	100	93.373	Mus_pahari
ENSNGAG00000004149	Ccdc12	100	92.771	MGP_SPRETEiJ_G0033885	Ccdc12	100	92.771	Mus_spretus
ENSNGAG00000004149	Ccdc12	100	88.554	ENSMLUG00000009547	CCDC12	100	88.554	Myotis_lucifugus
ENSNGAG00000004149	Ccdc12	96	66.038	ENSNBRG00000015275	ccdc12	97	64.780	Neolamprologus_brichardi
ENSNGAG00000004149	Ccdc12	100	89.759	ENSNLEG00000006219	CCDC12	100	89.759	Nomascus_leucogenys
ENSNGAG00000004149	Ccdc12	99	87.195	ENSOPRG00000005086	CCDC12	99	85.976	Ochotona_princeps
ENSNGAG00000004149	Ccdc12	100	94.578	ENSODEG00000012202	CCDC12	100	94.578	Octodon_degus
ENSNGAG00000004149	Ccdc12	96	70.988	ENSONIG00000003061	ccdc12	98	70.988	Oreochromis_niloticus
ENSNGAG00000004149	Ccdc12	80	76.866	ENSOANG00000004263	-	82	80.000	Ornithorhynchus_anatinus
ENSNGAG00000004149	Ccdc12	100	95.181	ENSOCUG00000012431	CCDC12	85	95.181	Oryctolagus_cuniculus
ENSNGAG00000004149	Ccdc12	96	67.485	ENSORLG00000008126	ccdc12	98	67.485	Oryzias_latipes
ENSNGAG00000004149	Ccdc12	96	68.944	ENSORLG00020013927	ccdc12	98	68.944	Oryzias_latipes_hni
ENSNGAG00000004149	Ccdc12	96	68.944	ENSORLG00015020115	ccdc12	98	68.944	Oryzias_latipes_hsok
ENSNGAG00000004149	Ccdc12	96	68.944	ENSOMEG00000022304	ccdc12	98	68.944	Oryzias_melastigma
ENSNGAG00000004149	Ccdc12	96	68.944	ENSOMEG00000014082	ccdc12	98	68.944	Oryzias_melastigma
ENSNGAG00000004149	Ccdc12	67	95.536	ENSOGAG00000016807	CCDC12	98	95.455	Otolemur_garnettii
ENSNGAG00000004149	Ccdc12	81	89.051	ENSOARG00000006426	CCDC12	100	89.781	Ovis_aries
ENSNGAG00000004149	Ccdc12	100	90.964	ENSPPAG00000028782	CCDC12	93	90.964	Pan_paniscus
ENSNGAG00000004149	Ccdc12	100	95.181	ENSPPRG00000013547	CCDC12	100	95.181	Panthera_pardus
ENSNGAG00000004149	Ccdc12	100	95.181	ENSPTIG00000014875	CCDC12	95	95.181	Panthera_tigris_altaica
ENSNGAG00000004149	Ccdc12	100	91.566	ENSPTRG00000014862	CCDC12	93	91.566	Pan_troglodytes
ENSNGAG00000004149	Ccdc12	100	91.566	ENSPANG00000017485	CCDC12	95	91.566	Papio_anubis
ENSNGAG00000004149	Ccdc12	96	69.565	ENSPKIG00000019130	ccdc12	98	70.807	Paramormyrops_kingsleyae
ENSNGAG00000004149	Ccdc12	67	83.036	ENSPSIG00000010867	CCDC12	98	82.727	Pelodiscus_sinensis
ENSNGAG00000004149	Ccdc12	96	68.519	ENSPMGG00000012211	ccdc12	98	68.519	Periophthalmus_magnuspinnatus
ENSNGAG00000004149	Ccdc12	100	93.976	ENSPEMG00000022196	-	100	93.976	Peromyscus_maniculatus_bairdii
ENSNGAG00000004149	Ccdc12	100	74.850	ENSPEMG00000001376	-	100	74.850	Peromyscus_maniculatus_bairdii
ENSNGAG00000004149	Ccdc12	94	66.879	ENSPMAG00000000005	ccdc12	98	64.671	Petromyzon_marinus
ENSNGAG00000004149	Ccdc12	100	81.928	ENSPCIG00000025941	CCDC12	100	81.928	Phascolarctos_cinereus
ENSNGAG00000004149	Ccdc12	84	73.050	ENSPFOG00000000343	ccdc12	98	69.753	Poecilia_formosa
ENSNGAG00000004149	Ccdc12	96	68.944	ENSPLAG00000019010	ccdc12	98	68.944	Poecilia_latipinna
ENSNGAG00000004149	Ccdc12	84	73.050	ENSPMEG00000022371	ccdc12	79	69.753	Poecilia_mexicana
ENSNGAG00000004149	Ccdc12	96	69.753	ENSPREG00000020932	ccdc12	79	69.753	Poecilia_reticulata
ENSNGAG00000004149	Ccdc12	100	91.566	ENSPPYG00000013924	CCDC12	82	91.566	Pongo_abelii
ENSNGAG00000004149	Ccdc12	100	92.814	ENSPCAG00000005800	CCDC12	100	92.814	Procavia_capensis
ENSNGAG00000004149	Ccdc12	100	92.814	ENSPCOG00000018682	CCDC12	93	94.012	Propithecus_coquereli
ENSNGAG00000004149	Ccdc12	100	94.578	ENSPVAG00000004204	CCDC12	100	94.578	Pteropus_vampyrus
ENSNGAG00000004149	Ccdc12	96	70.988	ENSPNYG00000016295	ccdc12	98	70.988	Pundamilia_nyererei
ENSNGAG00000004149	Ccdc12	96	53.704	ENSPNAG00000028558	ccdc12	88	78.182	Pygocentrus_nattereri
ENSNGAG00000004149	Ccdc12	100	93.373	ENSRNOG00000020946	Ccdc12	100	93.373	Rattus_norvegicus
ENSNGAG00000004149	Ccdc12	100	91.566	ENSRBIG00000039910	CCDC12	93	91.566	Rhinopithecus_bieti
ENSNGAG00000004149	Ccdc12	100	91.566	ENSRROG00000039721	CCDC12	100	91.566	Rhinopithecus_roxellana
ENSNGAG00000004149	Ccdc12	100	92.169	ENSSBOG00000035443	CCDC12	93	92.169	Saimiri_boliviensis_boliviensis
ENSNGAG00000004149	Ccdc12	92	84.967	ENSSHAG00000003265	-	95	81.046	Sarcophilus_harrisii
ENSNGAG00000004149	Ccdc12	97	68.098	ENSSFOG00015001307	ccdc12	99	68.098	Scleropages_formosus
ENSNGAG00000004149	Ccdc12	96	70.370	ENSSMAG00000019856	ccdc12	98	70.370	Scophthalmus_maximus
ENSNGAG00000004149	Ccdc12	94	69.620	ENSSDUG00000006549	ccdc12	96	69.620	Seriola_dumerili
ENSNGAG00000004149	Ccdc12	96	69.753	ENSSLDG00000015956	ccdc12	98	69.753	Seriola_lalandi_dorsalis
ENSNGAG00000004149	Ccdc12	60	93.750	ENSSARG00000004686	-	58	93.750	Sorex_araneus
ENSNGAG00000004149	Ccdc12	89	50.000	ENSSPUG00000013054	CCDC12	61	69.912	Sphenodon_punctatus
ENSNGAG00000004149	Ccdc12	96	69.136	ENSSPAG00000007010	ccdc12	98	69.136	Stegastes_partitus
ENSNGAG00000004149	Ccdc12	100	94.578	ENSSSCG00000011329	-	100	94.578	Sus_scrofa
ENSNGAG00000004149	Ccdc12	95	51.572	ENSSSCG00000007882	-	99	50.641	Sus_scrofa
ENSNGAG00000004149	Ccdc12	69	62.698	ENSTGUG00000000186	CCDC12	100	62.698	Taeniopygia_guttata
ENSNGAG00000004149	Ccdc12	96	63.522	ENSTRUG00000014023	ccdc12	83	62.893	Takifugu_rubripes
ENSNGAG00000004149	Ccdc12	96	68.553	ENSTNIG00000018407	ccdc12	96	68.553	Tetraodon_nigroviridis
ENSNGAG00000004149	Ccdc12	100	68.862	ENSTBEG00000000048	CCDC12	100	68.862	Tupaia_belangeri
ENSNGAG00000004149	Ccdc12	100	83.333	ENSTTRG00000015854	CCDC12	100	82.143	Tursiops_truncatus
ENSNGAG00000004149	Ccdc12	100	88.554	ENSUAMG00000025548	CCDC12	97	95.000	Ursus_americanus
ENSNGAG00000004149	Ccdc12	100	94.578	ENSUMAG00000004346	CCDC12	100	94.578	Ursus_maritimus
ENSNGAG00000004149	Ccdc12	68	75.221	ENSVPAG00000000070	-	100	75.221	Vicugna_pacos
ENSNGAG00000004149	Ccdc12	100	94.578	ENSVVUG00000004582	CCDC12	100	94.578	Vulpes_vulpes
ENSNGAG00000004149	Ccdc12	80	78.947	ENSXETG00000013123	ccdc12	82	84.545	Xenopus_tropicalis
ENSNGAG00000004149	Ccdc12	96	68.944	ENSXCOG00000019741	ccdc12	98	68.944	Xiphophorus_couchianus
ENSNGAG00000004149	Ccdc12	96	68.944	ENSXMAG00000014098	ccdc12	79	68.944	Xiphophorus_maculatus