EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000004371 (Gene tree)
Gene ID: -
Gene Symbol: Pabpc5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 1989 bases
Position: chrKL204433.1:1994126-1996114
Accession: 103749598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003671	RRM_1	PF00076.22	9.9e-45	1	2
ENSNGAP00000003671	RRM_1	PF00076.22	9.9e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000005440	-	1462	XM_008852462	ENSNGAP00000003671	218 (aa)	XP_008850684	-

Gene Model

Click here to download ENSNGAG00000004371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000004371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000004371	Pabpc5	99	65.728	ENSNGAG00000018292	Pabpc4	60	65.728
ENSNGAG00000004371	Pabpc5	79	30.526	ENSNGAG00000021745	Hnrnpa3	53	30.526
ENSNGAG00000004371	Pabpc5	99	61.972	ENSNGAG00000000996	Pabpc1	58	61.972
ENSNGAG00000004371	Pabpc5	99	56.132	ENSNGAG00000016040	Pabpc2	57	56.132
ENSNGAG00000004371	Pabpc5	78	33.333	ENSNGAG00000015156	-	59	33.333
ENSNGAG00000004371	Pabpc5	74	30.952	ENSNGAG00000017304	-	53	30.952
ENSNGAG00000004371	Pabpc5	98	52.582	ENSNGAG00000023820	-	57	52.582
ENSNGAG00000004371	Pabpc5	99	56.338	ENSNGAG00000010458	Pabpc1l	61	56.338
ENSNGAG00000004371	Pabpc5	99	57.277	ENSNGAG00000001502	Pabpc4l	98	57.277
ENSNGAG00000004371	Pabpc5	99	56.338	ENSNGAG00000000987	Pabpc6	58	55.399
ENSNGAG00000004371	Pabpc5	85	40.000	ENSNGAG00000010756	-	51	40.000
ENSNGAG00000004371	Pabpc5	80	40.476	ENSNGAG00000012688	-	86	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000004371	Pabpc5	100	95.413	ENSG00000174740	PABPC5	100	95.413	Homo_sapiens
ENSNGAG00000004371	Pabpc5	99	95.853	ENSAMEG00000020114	PABPC5	95	95.853	Ailuropoda_melanoleuca
ENSNGAG00000004371	Pabpc5	99	95.853	ENSANAG00000005063	PABPC5	95	95.853	Aotus_nancymaae
ENSNGAG00000004371	Pabpc5	100	94.954	ENSBTAG00000019942	PABPC5	95	94.954	Bos_taurus
ENSNGAG00000004371	Pabpc5	99	94.931	ENSCJAG00000003665	PABPC5	95	94.931	Callithrix_jacchus
ENSNGAG00000004371	Pabpc5	100	94.495	ENSCAFG00000017452	PABPC5	95	94.495	Canis_familiaris
ENSNGAG00000004371	Pabpc5	100	94.954	ENSCHIG00000019004	PABPC5	95	94.954	Capra_hircus
ENSNGAG00000004371	Pabpc5	100	95.413	ENSTSYG00000036351	PABPC5	95	95.413	Carlito_syrichta
ENSNGAG00000004371	Pabpc5	100	87.500	ENSCAPG00000010714	PABPC5	80	87.500	Cavia_aperea
ENSNGAG00000004371	Pabpc5	100	91.284	ENSCPOG00000002555	PABPC5	95	91.284	Cavia_porcellus
ENSNGAG00000004371	Pabpc5	99	95.853	ENSCCAG00000032154	PABPC5	95	95.853	Cebus_capucinus
ENSNGAG00000004371	Pabpc5	99	96.313	ENSCATG00000043083	PABPC5	95	96.313	Cercocebus_atys
ENSNGAG00000004371	Pabpc5	100	93.578	ENSCLAG00000000647	PABPC5	95	93.578	Chinchilla_lanigera
ENSNGAG00000004371	Pabpc5	99	96.313	ENSCSAG00000000065	PABPC5	95	96.313	Chlorocebus_sabaeus
ENSNGAG00000004371	Pabpc5	99	96.313	ENSCANG00000011473	PABPC5	95	96.313	Colobus_angolensis_palliatus
ENSNGAG00000004371	Pabpc5	100	92.661	ENSCGRG00000018699	Pabpc5	95	92.661	Cricetulus_griseus_crigri
ENSNGAG00000004371	Pabpc5	100	90.594	ENSETEG00000011832	PABPC5	53	90.594	Echinops_telfairi
ENSNGAG00000004371	Pabpc5	100	95.413	ENSEASG00005014396	PABPC5	95	95.413	Equus_asinus_asinus
ENSNGAG00000004371	Pabpc5	100	95.413	ENSECAG00000003452	PABPC5	95	95.413	Equus_caballus
ENSNGAG00000004371	Pabpc5	100	94.954	ENSFCAG00000004998	PABPC5	95	94.954	Felis_catus
ENSNGAG00000004371	Pabpc5	100	94.495	ENSFDAG00000000126	PABPC5	95	94.495	Fukomys_damarensis
ENSNGAG00000004371	Pabpc5	99	95.853	ENSGGOG00000007622	PABPC5	95	95.853	Gorilla_gorilla
ENSNGAG00000004371	Pabpc5	100	97.248	ENSJJAG00000011960	Pabpc5	100	97.248	Jaculus_jaculus
ENSNGAG00000004371	Pabpc5	99	96.313	ENSMFAG00000024561	PABPC5	95	96.313	Macaca_fascicularis
ENSNGAG00000004371	Pabpc5	99	96.313	ENSMMUG00000011562	PABPC5	95	96.313	Macaca_mulatta
ENSNGAG00000004371	Pabpc5	99	96.313	ENSMNEG00000037604	PABPC5	95	96.313	Macaca_nemestrina
ENSNGAG00000004371	Pabpc5	99	96.313	ENSMLEG00000028318	PABPC5	95	96.313	Mandrillus_leucophaeus
ENSNGAG00000004371	Pabpc5	100	94.037	ENSMICG00000041706	PABPC5	95	94.037	Microcebus_murinus
ENSNGAG00000004371	Pabpc5	100	94.037	ENSMOCG00000001554	Pabpc5	95	94.037	Microtus_ochrogaster
ENSNGAG00000004371	Pabpc5	100	92.661	MGP_CAROLIEiJ_G0033367	Pabpc5	95	92.661	Mus_caroli
ENSNGAG00000004371	Pabpc5	100	92.661	ENSMUSG00000034732	Pabpc5	95	92.661	Mus_musculus
ENSNGAG00000004371	Pabpc5	100	93.119	MGP_PahariEiJ_G0031908	Pabpc5	95	93.119	Mus_pahari
ENSNGAG00000004371	Pabpc5	100	92.661	MGP_SPRETEiJ_G0034533	Pabpc5	95	92.661	Mus_spretus
ENSNGAG00000004371	Pabpc5	100	94.037	ENSMPUG00000018465	PABPC5	95	94.037	Mustela_putorius_furo
ENSNGAG00000004371	Pabpc5	100	93.119	ENSMLUG00000008244	PABPC5	95	93.119	Myotis_lucifugus
ENSNGAG00000004371	Pabpc5	99	95.853	ENSNLEG00000035086	PABPC5	95	95.853	Nomascus_leucogenys
ENSNGAG00000004371	Pabpc5	96	98.246	ENSOPRG00000000856	PABPC5	91	98.246	Ochotona_princeps
ENSNGAG00000004371	Pabpc5	100	96.330	ENSOCUG00000010919	PABPC5	95	96.330	Oryctolagus_cuniculus
ENSNGAG00000004371	Pabpc5	100	95.413	ENSOGAG00000006882	PABPC5	95	95.413	Otolemur_garnettii
ENSNGAG00000004371	Pabpc5	100	95.413	ENSOARG00000010260	PABPC5	95	95.413	Ovis_aries
ENSNGAG00000004371	Pabpc5	99	95.392	ENSPPAG00000007378	PABPC5	95	95.392	Pan_paniscus
ENSNGAG00000004371	Pabpc5	100	94.954	ENSPPRG00000010742	PABPC5	95	94.954	Panthera_pardus
ENSNGAG00000004371	Pabpc5	100	94.954	ENSPTIG00000001480	PABPC5	95	94.954	Panthera_tigris_altaica
ENSNGAG00000004371	Pabpc5	99	95.853	ENSPTRG00000022078	PABPC5	95	95.853	Pan_troglodytes
ENSNGAG00000004371	Pabpc5	99	96.313	ENSPANG00000018282	PABPC5	95	96.313	Papio_anubis
ENSNGAG00000004371	Pabpc5	100	93.578	ENSPEMG00000000171	Pabpc5	95	93.578	Peromyscus_maniculatus_bairdii
ENSNGAG00000004371	Pabpc5	99	95.853	ENSPPYG00000020526	PABPC5	95	95.853	Pongo_abelii
ENSNGAG00000004371	Pabpc5	98	94.595	ENSPCAG00000015577	PABPC5	93	94.595	Procavia_capensis
ENSNGAG00000004371	Pabpc5	100	95.413	ENSPCOG00000000676	PABPC5	95	95.413	Propithecus_coquereli
ENSNGAG00000004371	Pabpc5	100	94.954	ENSPVAG00000006465	PABPC5	95	94.954	Pteropus_vampyrus
ENSNGAG00000004371	Pabpc5	100	93.578	ENSRNOG00000003354	Pabpc5	95	93.578	Rattus_norvegicus
ENSNGAG00000004371	Pabpc5	99	96.313	ENSRBIG00000011760	PABPC5	95	96.313	Rhinopithecus_bieti
ENSNGAG00000004371	Pabpc5	99	96.313	ENSRROG00000036708	PABPC5	95	96.313	Rhinopithecus_roxellana
ENSNGAG00000004371	Pabpc5	99	95.392	ENSSBOG00000008658	PABPC5	95	95.392	Saimiri_boliviensis_boliviensis
ENSNGAG00000004371	Pabpc5	100	91.743	ENSSARG00000014012	PABPC5	95	91.743	Sorex_araneus
ENSNGAG00000004371	Pabpc5	100	95.872	ENSSSCG00000040194	PABPC5	95	95.872	Sus_scrofa
ENSNGAG00000004371	Pabpc5	100	97.248	ENSTBEG00000016482	PABPC5	95	97.248	Tupaia_belangeri
ENSNGAG00000004371	Pabpc5	100	94.954	ENSUAMG00000013627	PABPC5	95	94.954	Ursus_americanus
ENSNGAG00000004371	Pabpc5	100	94.495	ENSUMAG00000023934	PABPC5	95	94.495	Ursus_maritimus
ENSNGAG00000004371	Pabpc5	100	94.495	ENSVPAG00000001063	PABPC5	95	94.495	Vicugna_pacos
ENSNGAG00000004371	Pabpc5	100	94.954	ENSVVUG00000013172	PABPC5	95	94.954	Vulpes_vulpes