EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000004849 (Gene tree)
Gene ID: 103732906
Gene Symbol: Snrnp48
Alias: 1110050F08Rik|6530403A03Rik
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 24361 bases
Position: chrKL200475.1:6784752-6809112
Accession: 103732906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000003934	zf-U11-48K	PF05253.12	1e-08	1	1
ENSNGAP00000003925	zf-U11-48K	PF05253.12	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000006031	-	843	-	ENSNGAP00000003934	280 (aa)	-	-
ENSNGAT00000006014	-	2108	XM_008831640	ENSNGAP00000003925	339 (aa)	XP_008829862	UPI0004ED32E1

Gene Model

Click here to download ENSNGAG00000004849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000004849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000004849	Snrnp48	99	87.574	ENSG00000168566	SNRNP48	99	87.574	Homo_sapiens
ENSNGAG00000004849	Snrnp48	81	48.239	ENSAPOG00000021430	snrnp48	96	44.126	Acanthochromis_polyacanthus
ENSNGAG00000004849	Snrnp48	99	83.573	ENSAMEG00000017349	SNRNP48	100	83.573	Ailuropoda_melanoleuca
ENSNGAG00000004849	Snrnp48	88	45.333	ENSACIG00000002032	snrnp48	96	41.547	Amphilophus_citrinellus
ENSNGAG00000004849	Snrnp48	81	48.592	ENSAOCG00000010562	snrnp48	96	44.828	Amphiprion_ocellaris
ENSNGAG00000004849	Snrnp48	81	48.582	ENSAPEG00000003231	snrnp48	96	44.798	Amphiprion_percula
ENSNGAG00000004849	Snrnp48	71	52.479	ENSATEG00000020210	snrnp48	92	44.940	Anabas_testudineus
ENSNGAG00000004849	Snrnp48	83	63.699	ENSACAG00000002811	SNRNP48	90	63.699	Anolis_carolinensis
ENSNGAG00000004849	Snrnp48	99	87.278	ENSANAG00000033538	SNRNP48	99	87.278	Aotus_nancymaae
ENSNGAG00000004849	Snrnp48	93	45.342	ENSAMXG00000015309	snrnp48	97	44.118	Astyanax_mexicanus
ENSNGAG00000004849	Snrnp48	99	82.301	ENSBTAG00000001123	SNRNP48	99	82.891	Bos_taurus
ENSNGAG00000004849	Snrnp48	99	87.870	ENSCJAG00000021330	SNRNP48	99	87.870	Callithrix_jacchus
ENSNGAG00000004849	Snrnp48	99	87.164	ENSCAFG00000009574	SNRNP48	83	86.905	Canis_familiaris
ENSNGAG00000004849	Snrnp48	99	87.202	ENSCAFG00020013203	SNRNP48	99	87.202	Canis_lupus_dingo
ENSNGAG00000004849	Snrnp48	99	83.776	ENSCHIG00000015216	SNRNP48	99	84.366	Capra_hircus
ENSNGAG00000004849	Snrnp48	99	86.982	ENSTSYG00000000698	SNRNP48	99	86.982	Carlito_syrichta
ENSNGAG00000004849	Snrnp48	90	82.353	ENSCAPG00000006768	SNRNP48	99	82.353	Cavia_aperea
ENSNGAG00000004849	Snrnp48	99	85.503	ENSCPOG00000007910	SNRNP48	99	85.503	Cavia_porcellus
ENSNGAG00000004849	Snrnp48	99	86.391	ENSCCAG00000035652	SNRNP48	99	86.391	Cebus_capucinus
ENSNGAG00000004849	Snrnp48	99	86.982	ENSCATG00000033947	SNRNP48	99	86.982	Cercocebus_atys
ENSNGAG00000004849	Snrnp48	99	86.686	ENSCLAG00000003765	SNRNP48	99	86.686	Chinchilla_lanigera
ENSNGAG00000004849	Snrnp48	99	87.574	ENSCSAG00000007409	SNRNP48	99	87.574	Chlorocebus_sabaeus
ENSNGAG00000004849	Snrnp48	84	63.455	ENSCPBG00000019146	SNRNP48	91	63.455	Chrysemys_picta_bellii
ENSNGAG00000004849	Snrnp48	99	87.574	ENSCANG00000030017	SNRNP48	99	87.574	Colobus_angolensis_palliatus
ENSNGAG00000004849	Snrnp48	99	70.746	ENSCGRG00001008805	-	95	70.149	Cricetulus_griseus_chok1gshd
ENSNGAG00000004849	Snrnp48	99	91.124	ENSCGRG00001001076	-	99	91.124	Cricetulus_griseus_chok1gshd
ENSNGAG00000004849	Snrnp48	99	91.124	ENSCGRG00000007781	Snrnp48	99	91.124	Cricetulus_griseus_crigri
ENSNGAG00000004849	Snrnp48	77	50.190	ENSCSEG00000000722	snrnp48	72	50.190	Cynoglossus_semilaevis
ENSNGAG00000004849	Snrnp48	96	45.536	ENSCVAG00000019829	snrnp48	67	49.434	Cyprinodon_variegatus
ENSNGAG00000004849	Snrnp48	81	45.745	ENSDARG00000039989	snrnp48	96	41.888	Danio_rerio
ENSNGAG00000004849	Snrnp48	98	87.126	ENSDNOG00000014978	SNRNP48	98	87.126	Dasypus_novemcinctus
ENSNGAG00000004849	Snrnp48	99	85.251	ENSDORG00000015140	Snrnp48	99	85.251	Dipodomys_ordii
ENSNGAG00000004849	Snrnp48	51	39.726	ENSEBUG00000016376	-	69	38.150	Eptatretus_burgeri
ENSNGAG00000004849	Snrnp48	99	87.278	ENSEASG00005012021	SNRNP48	99	87.278	Equus_asinus_asinus
ENSNGAG00000004849	Snrnp48	99	87.870	ENSECAG00000026937	SNRNP48	99	87.870	Equus_caballus
ENSNGAG00000004849	Snrnp48	99	79.000	ENSEEUG00000015437	SNRNP48	99	66.372	Erinaceus_europaeus
ENSNGAG00000004849	Snrnp48	87	47.351	ENSELUG00000009766	snrnp48	94	43.314	Esox_lucius
ENSNGAG00000004849	Snrnp48	99	86.982	ENSFCAG00000018853	SNRNP48	99	86.982	Felis_catus
ENSNGAG00000004849	Snrnp48	83	64.726	ENSFALG00000007797	SNRNP48	93	64.726	Ficedula_albicollis
ENSNGAG00000004849	Snrnp48	99	84.911	ENSFDAG00000009231	SNRNP48	99	84.911	Fukomys_damarensis
ENSNGAG00000004849	Snrnp48	59	57.214	ENSFHEG00000014647	snrnp48	97	47.176	Fundulus_heteroclitus
ENSNGAG00000004849	Snrnp48	73	50.000	ENSGMOG00000018599	-	81	49.438	Gadus_morhua
ENSNGAG00000004849	Snrnp48	77	66.176	ENSGALG00000013005	SNRNP48	92	66.176	Gallus_gallus
ENSNGAG00000004849	Snrnp48	82	49.643	ENSGAFG00000021639	snrnp48	93	45.536	Gambusia_affinis
ENSNGAG00000004849	Snrnp48	71	51.653	ENSGACG00000017756	-	96	43.642	Gasterosteus_aculeatus
ENSNGAG00000004849	Snrnp48	84	62.667	ENSGAGG00000000865	SNRNP48	97	62.667	Gopherus_agassizii
ENSNGAG00000004849	Snrnp48	99	87.870	ENSGGOG00000013220	SNRNP48	99	87.870	Gorilla_gorilla
ENSNGAG00000004849	Snrnp48	97	41.765	ENSHBUG00000017066	snrnp48	95	43.228	Haplochromis_burtoni
ENSNGAG00000004849	Snrnp48	99	85.799	ENSHGLG00000015241	SNRNP48	99	85.799	Heterocephalus_glaber_female
ENSNGAG00000004849	Snrnp48	99	85.799	ENSHGLG00100010027	SNRNP48	99	85.799	Heterocephalus_glaber_male
ENSNGAG00000004849	Snrnp48	72	48.780	ENSHCOG00000014066	snrnp48	92	41.983	Hippocampus_comes
ENSNGAG00000004849	Snrnp48	99	89.941	ENSSTOG00000014635	SNRNP48	99	90.909	Ictidomys_tridecemlineatus
ENSNGAG00000004849	Snrnp48	99	85.503	ENSJJAG00000011495	Snrnp48	99	85.503	Jaculus_jaculus
ENSNGAG00000004849	Snrnp48	91	45.833	ENSKMAG00000016514	snrnp48	94	44.118	Kryptolebias_marmoratus
ENSNGAG00000004849	Snrnp48	76	47.126	ENSLBEG00000026249	snrnp48	95	43.491	Labrus_bergylta
ENSNGAG00000004849	Snrnp48	95	54.848	ENSLACG00000003958	SNRNP48	98	53.061	Latimeria_chalumnae
ENSNGAG00000004849	Snrnp48	83	51.211	ENSLOCG00000004187	snrnp48	95	48.961	Lepisosteus_oculatus
ENSNGAG00000004849	Snrnp48	99	84.024	ENSLAFG00000011152	SNRNP48	99	84.024	Loxodonta_africana
ENSNGAG00000004849	Snrnp48	99	87.870	ENSMFAG00000045216	SNRNP48	99	87.870	Macaca_fascicularis
ENSNGAG00000004849	Snrnp48	99	87.870	ENSMMUG00000014785	SNRNP48	99	87.870	Macaca_mulatta
ENSNGAG00000004849	Snrnp48	99	87.870	ENSMNEG00000042269	SNRNP48	99	87.870	Macaca_nemestrina
ENSNGAG00000004849	Snrnp48	99	87.870	ENSMLEG00000034004	SNRNP48	99	87.870	Mandrillus_leucophaeus
ENSNGAG00000004849	Snrnp48	76	50.000	ENSMAMG00000018673	snrnp48	82	44.282	Mastacembelus_armatus
ENSNGAG00000004849	Snrnp48	83	64.286	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSNGAG00000004849	Snrnp48	99	90.828	ENSMAUG00000011944	Snrnp48	99	90.828	Mesocricetus_auratus
ENSNGAG00000004849	Snrnp48	99	86.686	ENSMICG00000012497	SNRNP48	99	86.686	Microcebus_murinus
ENSNGAG00000004849	Snrnp48	99	90.533	ENSMOCG00000015555	Snrnp48	99	90.533	Microtus_ochrogaster
ENSNGAG00000004849	Snrnp48	54	54.595	ENSMMOG00000003072	-	58	54.595	Mola_mola
ENSNGAG00000004849	Snrnp48	99	68.986	ENSMODG00000009996	SNRNP48	93	68.986	Monodelphis_domestica
ENSNGAG00000004849	Snrnp48	74	50.787	ENSMALG00000005725	snrnp48	95	44.083	Monopterus_albus
ENSNGAG00000004849	Snrnp48	99	90.533	MGP_CAROLIEiJ_G0018441	Snrnp48	99	90.533	Mus_caroli
ENSNGAG00000004849	Snrnp48	99	89.645	ENSMUSG00000021431	Snrnp48	99	89.645	Mus_musculus
ENSNGAG00000004849	Snrnp48	99	90.828	MGP_PahariEiJ_G0019509	Snrnp48	99	90.828	Mus_pahari
ENSNGAG00000004849	Snrnp48	99	89.349	MGP_SPRETEiJ_G0019321	Snrnp48	99	89.349	Mus_spretus
ENSNGAG00000004849	Snrnp48	97	41.471	ENSNBRG00000012127	snrnp48	95	42.775	Neolamprologus_brichardi
ENSNGAG00000004849	Snrnp48	99	87.870	ENSNLEG00000011667	SNRNP48	99	87.870	Nomascus_leucogenys
ENSNGAG00000004849	Snrnp48	95	77.090	ENSOPRG00000015471	SNRNP48	100	76.780	Ochotona_princeps
ENSNGAG00000004849	Snrnp48	76	48.846	ENSONIG00000001520	snrnp48	96	43.266	Oreochromis_niloticus
ENSNGAG00000004849	Snrnp48	63	60.209	ENSOANG00000019888	-	100	62.981	Ornithorhynchus_anatinus
ENSNGAG00000004849	Snrnp48	84	88.112	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSNGAG00000004849	Snrnp48	88	49.026	ENSORLG00000015654	snrnp48	94	45.954	Oryzias_latipes
ENSNGAG00000004849	Snrnp48	88	47.078	ENSORLG00020015976	snrnp48	79	45.588	Oryzias_latipes_hni
ENSNGAG00000004849	Snrnp48	88	48.052	ENSORLG00015022379	snrnp48	81	46.243	Oryzias_latipes_hsok
ENSNGAG00000004849	Snrnp48	83	47.917	ENSOMEG00000022007	snrnp48	95	45.797	Oryzias_melastigma
ENSNGAG00000004849	Snrnp48	91	86.774	ENSOGAG00000005275	SNRNP48	96	86.435	Otolemur_garnettii
ENSNGAG00000004849	Snrnp48	84	84.615	ENSOARG00000017319	SNRNP48	99	84.615	Ovis_aries
ENSNGAG00000004849	Snrnp48	99	87.870	ENSPPAG00000032873	SNRNP48	99	87.870	Pan_paniscus
ENSNGAG00000004849	Snrnp48	99	86.686	ENSPPRG00000004283	SNRNP48	99	86.686	Panthera_pardus
ENSNGAG00000004849	Snrnp48	84	87.063	ENSPTIG00000013502	SNRNP48	99	87.063	Panthera_tigris_altaica
ENSNGAG00000004849	Snrnp48	99	87.870	ENSPTRG00000017703	SNRNP48	99	87.870	Pan_troglodytes
ENSNGAG00000004849	Snrnp48	99	87.870	ENSPANG00000000771	SNRNP48	99	87.870	Papio_anubis
ENSNGAG00000004849	Snrnp48	94	45.970	ENSPKIG00000013703	snrnp48	59	49.648	Paramormyrops_kingsleyae
ENSNGAG00000004849	Snrnp48	84	61.462	ENSPSIG00000002213	SNRNP48	94	61.538	Pelodiscus_sinensis
ENSNGAG00000004849	Snrnp48	76	48.263	ENSPMGG00000008120	snrnp48	91	48.263	Periophthalmus_magnuspinnatus
ENSNGAG00000004849	Snrnp48	99	91.420	ENSPEMG00000008872	Snrnp48	99	91.420	Peromyscus_maniculatus_bairdii
ENSNGAG00000004849	Snrnp48	82	49.462	ENSPFOG00000003578	snrnp48	93	44.838	Poecilia_formosa
ENSNGAG00000004849	Snrnp48	67	52.609	ENSPLAG00000002290	snrnp48	77	52.609	Poecilia_latipinna
ENSNGAG00000004849	Snrnp48	82	49.462	ENSPMEG00000018033	snrnp48	93	44.838	Poecilia_mexicana
ENSNGAG00000004849	Snrnp48	72	53.441	ENSPREG00000018541	snrnp48	93	46.765	Poecilia_reticulata
ENSNGAG00000004849	Snrnp48	99	86.982	ENSPPYG00000016209	SNRNP48	99	86.982	Pongo_abelii
ENSNGAG00000004849	Snrnp48	74	82.143	ENSPCAG00000011991	SNRNP48	99	68.539	Procavia_capensis
ENSNGAG00000004849	Snrnp48	99	85.503	ENSPVAG00000002854	SNRNP48	99	85.503	Pteropus_vampyrus
ENSNGAG00000004849	Snrnp48	74	49.412	ENSPNYG00000015399	snrnp48	97	43.963	Pundamilia_nyererei
ENSNGAG00000004849	Snrnp48	99	89.645	ENSRNOG00000013756	Snrnp48	99	89.645	Rattus_norvegicus
ENSNGAG00000004849	Snrnp48	91	87.419	ENSRBIG00000043856	SNRNP48	98	87.419	Rhinopithecus_bieti
ENSNGAG00000004849	Snrnp48	99	87.574	ENSRROG00000043229	SNRNP48	99	87.574	Rhinopithecus_roxellana
ENSNGAG00000004849	Snrnp48	99	87.870	ENSSBOG00000019486	SNRNP48	99	87.870	Saimiri_boliviensis_boliviensis
ENSNGAG00000004849	Snrnp48	99	69.628	ENSSHAG00000014483	SNRNP48	100	69.628	Sarcophilus_harrisii
ENSNGAG00000004849	Snrnp48	61	45.977	ENSSFOG00015006610	snrnp48	84	44.538	Scleropages_formosus
ENSNGAG00000004849	Snrnp48	88	46.179	ENSSDUG00000014953	snrnp48	96	43.402	Seriola_dumerili
ENSNGAG00000004849	Snrnp48	88	45.847	ENSSLDG00000005989	snrnp48	96	43.553	Seriola_lalandi_dorsalis
ENSNGAG00000004849	Snrnp48	84	64.765	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSNGAG00000004849	Snrnp48	95	43.939	ENSSPAG00000006454	snrnp48	93	44.543	Stegastes_partitus
ENSNGAG00000004849	Snrnp48	83	62.887	ENSTGUG00000007575	SNRNP48	93	62.887	Taeniopygia_guttata
ENSNGAG00000004849	Snrnp48	73	50.996	ENSTRUG00000007031	snrnp48	82	49.645	Takifugu_rubripes
ENSNGAG00000004849	Snrnp48	75	48.235	ENSTNIG00000012977	-	75	48.235	Tetraodon_nigroviridis
ENSNGAG00000004849	Snrnp48	99	72.189	ENSTBEG00000015620	SNRNP48	99	72.189	Tupaia_belangeri
ENSNGAG00000004849	Snrnp48	99	84.911	ENSTTRG00000016715	SNRNP48	99	84.911	Tursiops_truncatus
ENSNGAG00000004849	Snrnp48	99	86.391	ENSUAMG00000003690	SNRNP48	99	86.391	Ursus_americanus
ENSNGAG00000004849	Snrnp48	84	83.916	ENSVPAG00000003557	SNRNP48	99	83.916	Vicugna_pacos
ENSNGAG00000004849	Snrnp48	99	86.607	ENSVVUG00000004996	SNRNP48	99	86.607	Vulpes_vulpes
ENSNGAG00000004849	Snrnp48	86	53.020	ENSXETG00000020447	snrnp48	97	51.183	Xenopus_tropicalis
ENSNGAG00000004849	Snrnp48	67	52.174	ENSXCOG00000004478	snrnp48	69	52.174	Xiphophorus_couchianus
ENSNGAG00000004849	Snrnp48	82	50.538	ENSXMAG00000013595	snrnp48	93	45.723	Xiphophorus_maculatus