EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000005027 (Gene tree)
Gene ID: 103738464
Gene Symbol: Ptcd2
Alias: 1190005P08Rik
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 36560 bases
Position: chrKL201678.1:2365884-2402443
Accession: 103738464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004021	PPR	PF01535.20	1.8e-05	1	1
ENSNGAP00000004021	MRP-S27	PF10037.9	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000006207	-	1761	XM_008838474	ENSNGAP00000004021	383 (aa)	XP_008836696	UPI0004ED4C22

Gene Model

Click here to download ENSNGAG00000005027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000005027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000005027	Ptcd2	100	74.413	ENSG00000049883	PTCD2	100	77.833	Homo_sapiens
ENSNGAG00000005027	Ptcd2	95	44.809	ENSAPOG00000020682	ptcd2	95	44.809	Acanthochromis_polyacanthus
ENSNGAG00000005027	Ptcd2	100	72.846	ENSAMEG00000007194	PTCD2	99	72.846	Ailuropoda_melanoleuca
ENSNGAG00000005027	Ptcd2	90	40.401	ENSACIG00000002053	ptcd2	100	40.401	Amphilophus_citrinellus
ENSNGAG00000005027	Ptcd2	95	43.597	ENSAOCG00000006616	ptcd2	93	43.597	Amphiprion_ocellaris
ENSNGAG00000005027	Ptcd2	95	43.597	ENSAPEG00000022926	ptcd2	93	43.597	Amphiprion_percula
ENSNGAG00000005027	Ptcd2	92	57.224	ENSACAG00000009747	PTCD2	90	57.224	Anolis_carolinensis
ENSNGAG00000005027	Ptcd2	100	74.935	ENSANAG00000029353	PTCD2	99	74.935	Aotus_nancymaae
ENSNGAG00000005027	Ptcd2	91	43.966	ENSACLG00000027742	ptcd2	89	43.966	Astatotilapia_calliptera
ENSNGAG00000005027	Ptcd2	85	43.865	ENSAMXG00000029404	ptcd2	87	43.865	Astyanax_mexicanus
ENSNGAG00000005027	Ptcd2	100	74.219	ENSBTAG00000014675	PTCD2	100	74.219	Bos_taurus
ENSNGAG00000005027	Ptcd2	100	73.107	ENSCJAG00000016364	PTCD2	99	73.107	Callithrix_jacchus
ENSNGAG00000005027	Ptcd2	100	72.063	ENSCAFG00000007982	PTCD2	90	72.063	Canis_familiaris
ENSNGAG00000005027	Ptcd2	91	74.286	ENSCAFG00020019147	PTCD2	98	74.286	Canis_lupus_dingo
ENSNGAG00000005027	Ptcd2	100	75.000	ENSCHIG00000017118	PTCD2	100	75.000	Capra_hircus
ENSNGAG00000005027	Ptcd2	100	72.585	ENSCPOG00000040168	PTCD2	100	72.585	Cavia_porcellus
ENSNGAG00000005027	Ptcd2	80	68.671	ENSCCAG00000021996	-	97	68.671	Cebus_capucinus
ENSNGAG00000005027	Ptcd2	100	72.585	ENSCCAG00000029389	-	99	72.585	Cebus_capucinus
ENSNGAG00000005027	Ptcd2	100	73.890	ENSCATG00000019069	PTCD2	100	73.890	Cercocebus_atys
ENSNGAG00000005027	Ptcd2	100	73.890	ENSCLAG00000000072	PTCD2	100	73.890	Chinchilla_lanigera
ENSNGAG00000005027	Ptcd2	100	73.629	ENSCSAG00000015623	PTCD2	100	73.629	Chlorocebus_sabaeus
ENSNGAG00000005027	Ptcd2	90	58.333	ENSCHOG00000010634	PTCD2	100	58.333	Choloepus_hoffmanni
ENSNGAG00000005027	Ptcd2	94	53.203	ENSCPBG00000000216	PTCD2	92	53.203	Chrysemys_picta_bellii
ENSNGAG00000005027	Ptcd2	100	73.107	ENSCANG00000035636	PTCD2	99	73.107	Colobus_angolensis_palliatus
ENSNGAG00000005027	Ptcd2	100	75.457	ENSCGRG00001015289	Ptcd2	84	75.457	Cricetulus_griseus_chok1gshd
ENSNGAG00000005027	Ptcd2	100	75.457	ENSCGRG00000006193	Ptcd2	84	75.457	Cricetulus_griseus_crigri
ENSNGAG00000005027	Ptcd2	91	45.690	ENSCVAG00000001285	ptcd2	89	45.690	Cyprinodon_variegatus
ENSNGAG00000005027	Ptcd2	96	44.624	ENSDARG00000035391	ptcd2	96	44.624	Danio_rerio
ENSNGAG00000005027	Ptcd2	100	73.107	ENSDNOG00000008719	PTCD2	100	73.107	Dasypus_novemcinctus
ENSNGAG00000005027	Ptcd2	100	73.385	ENSDORG00000004921	Ptcd2	100	73.385	Dipodomys_ordii
ENSNGAG00000005027	Ptcd2	100	64.249	ENSETEG00000016542	PTCD2	99	64.249	Echinops_telfairi
ENSNGAG00000005027	Ptcd2	97	74.663	ENSEASG00005018038	PTCD2	97	74.663	Equus_asinus_asinus
ENSNGAG00000005027	Ptcd2	97	74.933	ENSECAG00000007022	PTCD2	96	74.933	Equus_caballus
ENSNGAG00000005027	Ptcd2	100	69.452	ENSEEUG00000014031	PTCD2	99	69.452	Erinaceus_europaeus
ENSNGAG00000005027	Ptcd2	91	49.138	ENSELUG00000003584	ptcd2	91	49.138	Esox_lucius
ENSNGAG00000005027	Ptcd2	100	67.363	ENSFCAG00000045432	PTCD2	82	67.363	Felis_catus
ENSNGAG00000005027	Ptcd2	85	48.012	ENSFALG00000010299	PTCD2	99	48.012	Ficedula_albicollis
ENSNGAG00000005027	Ptcd2	100	70.496	ENSFDAG00000018461	PTCD2	100	70.496	Fukomys_damarensis
ENSNGAG00000005027	Ptcd2	91	49.858	ENSGMOG00000003637	ptcd2	91	49.858	Gadus_morhua
ENSNGAG00000005027	Ptcd2	92	47.875	ENSGALG00000038260	PTCD2	96	45.812	Gallus_gallus
ENSNGAG00000005027	Ptcd2	92	57.790	ENSGAGG00000021952	PTCD2	91	57.790	Gopherus_agassizii
ENSNGAG00000005027	Ptcd2	100	74.674	ENSGGOG00000010695	PTCD2	99	74.674	Gorilla_gorilla
ENSNGAG00000005027	Ptcd2	91	43.678	ENSHBUG00000009191	ptcd2	89	43.678	Haplochromis_burtoni
ENSNGAG00000005027	Ptcd2	100	72.585	ENSHGLG00000001234	PTCD2	100	72.585	Heterocephalus_glaber_female
ENSNGAG00000005027	Ptcd2	100	72.585	ENSHGLG00100015419	PTCD2	100	72.585	Heterocephalus_glaber_male
ENSNGAG00000005027	Ptcd2	91	46.418	ENSHCOG00000001703	ptcd2	90	46.418	Hippocampus_comes
ENSNGAG00000005027	Ptcd2	85	44.648	ENSIPUG00000006080	ptcd2	91	43.840	Ictalurus_punctatus
ENSNGAG00000005027	Ptcd2	99	75.726	ENSSTOG00000006596	PTCD2	99	75.726	Ictidomys_tridecemlineatus
ENSNGAG00000005027	Ptcd2	100	76.762	ENSJJAG00000024388	Ptcd2	100	76.762	Jaculus_jaculus
ENSNGAG00000005027	Ptcd2	95	42.700	ENSKMAG00000009329	ptcd2	94	42.700	Kryptolebias_marmoratus
ENSNGAG00000005027	Ptcd2	98	42.298	ENSLBEG00000024871	ptcd2	97	42.298	Labrus_bergylta
ENSNGAG00000005027	Ptcd2	93	52.809	ENSLOCG00000011122	ptcd2	93	52.809	Lepisosteus_oculatus
ENSNGAG00000005027	Ptcd2	81	75.241	ENSLAFG00000004115	PTCD2	100	75.241	Loxodonta_africana
ENSNGAG00000005027	Ptcd2	100	73.107	ENSMFAG00000031516	PTCD2	99	73.107	Macaca_fascicularis
ENSNGAG00000005027	Ptcd2	100	72.846	ENSMNEG00000007537	PTCD2	100	72.846	Macaca_nemestrina
ENSNGAG00000005027	Ptcd2	100	73.629	ENSMLEG00000031093	PTCD2	99	73.629	Mandrillus_leucophaeus
ENSNGAG00000005027	Ptcd2	97	45.989	ENSMAMG00000018529	ptcd2	97	45.989	Mastacembelus_armatus
ENSNGAG00000005027	Ptcd2	91	43.966	ENSMZEG00005003625	ptcd2	89	43.966	Maylandia_zebra
ENSNGAG00000005027	Ptcd2	91	48.851	ENSMGAG00000005033	PTCD2	100	48.851	Meleagris_gallopavo
ENSNGAG00000005027	Ptcd2	100	58.747	ENSMAUG00000020253	Ptcd2	100	58.747	Mesocricetus_auratus
ENSNGAG00000005027	Ptcd2	100	73.890	ENSMICG00000004535	PTCD2	99	73.890	Microcebus_murinus
ENSNGAG00000005027	Ptcd2	100	76.240	ENSMOCG00000019985	Ptcd2	100	76.240	Microtus_ochrogaster
ENSNGAG00000005027	Ptcd2	100	52.850	ENSMODG00000001695	PTCD2	100	52.850	Monodelphis_domestica
ENSNGAG00000005027	Ptcd2	91	46.839	ENSMALG00000022372	ptcd2	91	46.839	Monopterus_albus
ENSNGAG00000005027	Ptcd2	100	76.240	MGP_CAROLIEiJ_G0018829	Ptcd2	100	76.240	Mus_caroli
ENSNGAG00000005027	Ptcd2	100	75.979	ENSMUSG00000021650	Ptcd2	100	75.979	Mus_musculus
ENSNGAG00000005027	Ptcd2	100	78.329	MGP_PahariEiJ_G0015904	Ptcd2	100	78.329	Mus_pahari
ENSNGAG00000005027	Ptcd2	100	75.979	MGP_SPRETEiJ_G0019711	Ptcd2	100	75.979	Mus_spretus
ENSNGAG00000005027	Ptcd2	100	74.674	ENSMPUG00000014401	PTCD2	100	74.674	Mustela_putorius_furo
ENSNGAG00000005027	Ptcd2	100	71.802	ENSMLUG00000007374	PTCD2	99	71.802	Myotis_lucifugus
ENSNGAG00000005027	Ptcd2	91	44.253	ENSNBRG00000008174	ptcd2	91	44.253	Neolamprologus_brichardi
ENSNGAG00000005027	Ptcd2	86	43.636	ENSNBRG00000000092	-	100	43.636	Neolamprologus_brichardi
ENSNGAG00000005027	Ptcd2	100	75.196	ENSNLEG00000004516	PTCD2	99	75.196	Nomascus_leucogenys
ENSNGAG00000005027	Ptcd2	82	48.562	ENSMEUG00000014012	-	82	48.562	Notamacropus_eugenii
ENSNGAG00000005027	Ptcd2	100	68.930	ENSOPRG00000007290	PTCD2	99	68.930	Ochotona_princeps
ENSNGAG00000005027	Ptcd2	100	73.890	ENSODEG00000016417	PTCD2	100	73.890	Octodon_degus
ENSNGAG00000005027	Ptcd2	75	47.059	ENSONIG00000011269	ptcd2	85	47.059	Oreochromis_niloticus
ENSNGAG00000005027	Ptcd2	95	74.795	ENSOCUG00000007970	PTCD2	100	73.890	Oryctolagus_cuniculus
ENSNGAG00000005027	Ptcd2	95	43.956	ENSORLG00000003851	ptcd2	92	44.628	Oryzias_latipes
ENSNGAG00000005027	Ptcd2	95	43.132	ENSORLG00020009823	ptcd2	94	43.802	Oryzias_latipes_hni
ENSNGAG00000005027	Ptcd2	92	44.602	ENSORLG00015016777	ptcd2	99	45.299	Oryzias_latipes_hsok
ENSNGAG00000005027	Ptcd2	94	43.454	ENSOMEG00000012396	ptcd2	86	43.454	Oryzias_melastigma
ENSNGAG00000005027	Ptcd2	95	72.603	ENSOGAG00000008390	PTCD2	94	72.603	Otolemur_garnettii
ENSNGAG00000005027	Ptcd2	100	74.740	ENSOARG00000005087	PTCD2	99	74.740	Ovis_aries
ENSNGAG00000005027	Ptcd2	100	74.674	ENSPPAG00000028480	PTCD2	99	74.674	Pan_paniscus
ENSNGAG00000005027	Ptcd2	100	74.151	ENSPTRG00000016968	PTCD2	99	74.151	Pan_troglodytes
ENSNGAG00000005027	Ptcd2	90	76.812	ENSPANG00000006611	PTCD2	89	76.812	Papio_anubis
ENSNGAG00000005027	Ptcd2	93	47.339	ENSPKIG00000019896	ptcd2	93	47.339	Paramormyrops_kingsleyae
ENSNGAG00000005027	Ptcd2	83	56.962	ENSPSIG00000014559	PTCD2	98	56.962	Pelodiscus_sinensis
ENSNGAG00000005027	Ptcd2	100	76.364	ENSPEMG00000000884	Ptcd2	100	76.364	Peromyscus_maniculatus_bairdii
ENSNGAG00000005027	Ptcd2	93	58.939	ENSPCIG00000029047	PTCD2	93	58.939	Phascolarctos_cinereus
ENSNGAG00000005027	Ptcd2	85	44.954	ENSPLAG00000010456	ptcd2	91	44.540	Poecilia_latipinna
ENSNGAG00000005027	Ptcd2	91	45.115	ENSPREG00000021797	ptcd2	88	45.115	Poecilia_reticulata
ENSNGAG00000005027	Ptcd2	100	64.752	ENSPPYG00000015543	PTCD2	99	64.752	Pongo_abelii
ENSNGAG00000005027	Ptcd2	81	61.165	ENSPCAG00000006806	PTCD2	98	61.165	Procavia_capensis
ENSNGAG00000005027	Ptcd2	100	71.279	ENSPVAG00000010935	PTCD2	99	71.279	Pteropus_vampyrus
ENSNGAG00000005027	Ptcd2	91	43.966	ENSPNYG00000003122	ptcd2	89	43.966	Pundamilia_nyererei
ENSNGAG00000005027	Ptcd2	95	46.486	ENSPNAG00000021490	ptcd2	95	46.486	Pygocentrus_nattereri
ENSNGAG00000005027	Ptcd2	100	78.329	ENSRNOG00000028403	Ptcd2	100	78.329	Rattus_norvegicus
ENSNGAG00000005027	Ptcd2	100	69.191	ENSRBIG00000032929	PTCD2	99	69.191	Rhinopithecus_bieti
ENSNGAG00000005027	Ptcd2	100	73.107	ENSRROG00000000080	PTCD2	100	73.107	Rhinopithecus_roxellana
ENSNGAG00000005027	Ptcd2	100	73.107	ENSSBOG00000018911	PTCD2	100	73.107	Saimiri_boliviensis_boliviensis
ENSNGAG00000005027	Ptcd2	99	56.693	ENSSHAG00000003833	PTCD2	97	56.693	Sarcophilus_harrisii
ENSNGAG00000005027	Ptcd2	93	45.961	ENSSFOG00015015415	ptcd2	93	45.961	Scleropages_formosus
ENSNGAG00000005027	Ptcd2	99	41.534	ENSSMAG00000010350	ptcd2	96	41.534	Scophthalmus_maximus
ENSNGAG00000005027	Ptcd2	95	44.932	ENSSDUG00000008142	ptcd2	91	44.932	Seriola_dumerili
ENSNGAG00000005027	Ptcd2	95	44.932	ENSSLDG00000015284	ptcd2	95	44.932	Seriola_lalandi_dorsalis
ENSNGAG00000005027	Ptcd2	81	62.136	ENSSARG00000004983	PTCD2	99	62.136	Sorex_araneus
ENSNGAG00000005027	Ptcd2	93	51.404	ENSSPUG00000000176	PTCD2	90	51.404	Sphenodon_punctatus
ENSNGAG00000005027	Ptcd2	94	44.444	ENSSPAG00000008591	ptcd2	91	44.444	Stegastes_partitus
ENSNGAG00000005027	Ptcd2	100	73.766	ENSSSCG00000016975	PTCD2	90	73.766	Sus_scrofa
ENSNGAG00000005027	Ptcd2	87	49.249	ENSTGUG00000005705	PTCD2	96	49.249	Taeniopygia_guttata
ENSNGAG00000005027	Ptcd2	100	71.279	ENSTBEG00000016559	PTCD2	99	71.279	Tupaia_belangeri
ENSNGAG00000005027	Ptcd2	97	74.394	ENSTTRG00000011851	PTCD2	95	74.394	Tursiops_truncatus
ENSNGAG00000005027	Ptcd2	100	72.585	ENSUAMG00000007583	PTCD2	90	72.585	Ursus_americanus
ENSNGAG00000005027	Ptcd2	100	72.846	ENSUMAG00000007666	PTCD2	100	72.846	Ursus_maritimus
ENSNGAG00000005027	Ptcd2	99	73.298	ENSVPAG00000009597	PTCD2	98	73.298	Vicugna_pacos
ENSNGAG00000005027	Ptcd2	100	71.802	ENSVVUG00000007299	-	100	71.802	Vulpes_vulpes
ENSNGAG00000005027	Ptcd2	94	51.524	ENSXETG00000031652	PTCD2	94	51.524	Xenopus_tropicalis
ENSNGAG00000005027	Ptcd2	91	45.115	ENSXMAG00000005940	ptcd2	82	45.115	Xiphophorus_maculatus