EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000005214 (Gene tree)
Gene ID: 103736470
Gene Symbol: Scaf4
Alias: Sfrs15|Sra4|Srsf15
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 40230 bases
Position: chrKL201315.1:4944988-4985217
Accession: 103736470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004167	RRM_1	PF00076.22	2.9e-09	1	1
ENSNGAP00000004173	RRM_1	PF00076.22	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000006543	-	3453	XM_008835984	ENSNGAP00000004173	1150 (aa)	XP_008834206	-
ENSNGAT00000006529	-	3429	-	ENSNGAP00000004167	1142 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000005214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000005214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000005214	Scaf4	99	91.339	ENSG00000156304	SCAF4	99	91.579	Homo_sapiens
ENSNGAG00000005214	Scaf4	73	90.299	ENSAMEG00000014987	SCAF4	99	89.123	Ailuropoda_melanoleuca
ENSNGAG00000005214	Scaf4	79	52.340	ENSAOCG00000000615	scaf4a	55	57.675	Amphiprion_ocellaris
ENSNGAG00000005214	Scaf4	79	52.128	ENSAPEG00000021229	scaf4a	55	57.526	Amphiprion_percula
ENSNGAG00000005214	Scaf4	99	74.631	ENSAPLG00000002509	SCAF4	59	82.209	Anas_platyrhynchos
ENSNGAG00000005214	Scaf4	94	73.077	ENSACAG00000002569	SCAF4	50	84.146	Anolis_carolinensis
ENSNGAG00000005214	Scaf4	99	90.734	ENSANAG00000037494	SCAF4	99	90.630	Aotus_nancymaae
ENSNGAG00000005214	Scaf4	93	49.822	ENSAMXG00000008585	scaf4a	60	61.677	Astyanax_mexicanus
ENSNGAG00000005214	Scaf4	99	90.359	ENSBTAG00000018855	SCAF4	99	89.982	Bos_taurus
ENSNGAG00000005214	Scaf4	99	91.499	ENSCJAG00000008993	SCAF4	98	93.341	Callithrix_jacchus
ENSNGAG00000005214	Scaf4	99	90.885	ENSCAFG00000008863	SCAF4	99	90.035	Canis_familiaris
ENSNGAG00000005214	Scaf4	99	88.899	ENSCAFG00020026019	SCAF4	100	88.856	Canis_lupus_dingo
ENSNGAG00000005214	Scaf4	99	89.501	ENSCHIG00000008385	SCAF4	99	89.229	Capra_hircus
ENSNGAG00000005214	Scaf4	91	92.438	ENSTSYG00000011344	SCAF4	98	91.160	Carlito_syrichta
ENSNGAG00000005214	Scaf4	99	89.279	ENSCPOG00000012443	SCAF4	99	89.192	Cavia_porcellus
ENSNGAG00000005214	Scaf4	99	91.156	ENSCCAG00000033727	SCAF4	99	91.045	Cebus_capucinus
ENSNGAG00000005214	Scaf4	99	90.639	ENSCATG00000030379	SCAF4	100	90.289	Cercocebus_atys
ENSNGAG00000005214	Scaf4	99	90.286	ENSCLAG00000006298	SCAF4	100	90.113	Chinchilla_lanigera
ENSNGAG00000005214	Scaf4	99	90.925	ENSCSAG00000009438	SCAF4	99	90.559	Chlorocebus_sabaeus
ENSNGAG00000005214	Scaf4	99	91.068	ENSCANG00000029847	SCAF4	99	91.220	Colobus_angolensis_palliatus
ENSNGAG00000005214	Scaf4	68	90.909	ENSCGRG00001020821	Scaf4	99	85.105	Cricetulus_griseus_chok1gshd
ENSNGAG00000005214	Scaf4	73	86.707	ENSCGRG00000014360	Scaf4	64	91.942	Cricetulus_griseus_crigri
ENSNGAG00000005214	Scaf4	99	87.632	ENSDNOG00000019014	SCAF4	94	86.620	Dasypus_novemcinctus
ENSNGAG00000005214	Scaf4	95	78.162	ENSETEG00000000583	SCAF4	99	78.304	Echinops_telfairi
ENSNGAG00000005214	Scaf4	99	90.702	ENSEASG00005007756	SCAF4	99	89.694	Equus_asinus_asinus
ENSNGAG00000005214	Scaf4	99	90.614	ENSECAG00000014248	SCAF4	99	90.439	Equus_caballus
ENSNGAG00000005214	Scaf4	50	61.809	ENSELUG00000002779	SCAF8	59	69.565	Esox_lucius
ENSNGAG00000005214	Scaf4	99	90.630	ENSFCAG00000002228	SCAF4	99	90.518	Felis_catus
ENSNGAG00000005214	Scaf4	99	88.725	ENSFDAG00000017780	SCAF4	100	88.725	Fukomys_damarensis
ENSNGAG00000005214	Scaf4	99	75.895	ENSGALG00000033965	SCAF4	58	81.748	Gallus_gallus
ENSNGAG00000005214	Scaf4	70	52.284	ENSGACG00000020580	scaf4a	54	70.732	Gasterosteus_aculeatus
ENSNGAG00000005214	Scaf4	90	89.182	ENSGGOG00000015557	SCAF4	99	91.975	Gorilla_gorilla
ENSNGAG00000005214	Scaf4	99	89.835	ENSHGLG00000010582	SCAF4	99	89.983	Heterocephalus_glaber_female
ENSNGAG00000005214	Scaf4	99	89.878	ENSHGLG00100009441	SCAF4	100	89.965	Heterocephalus_glaber_male
ENSNGAG00000005214	Scaf4	99	84.894	ENSSTOG00000004450	SCAF4	100	86.055	Ictidomys_tridecemlineatus
ENSNGAG00000005214	Scaf4	99	89.132	ENSJJAG00000019447	Scaf4	99	88.014	Jaculus_jaculus
ENSNGAG00000005214	Scaf4	96	60.349	ENSLACG00000013913	SCAF4	59	71.807	Latimeria_chalumnae
ENSNGAG00000005214	Scaf4	98	56.514	ENSLOCG00000009162	scaf4a	59	68.366	Lepisosteus_oculatus
ENSNGAG00000005214	Scaf4	99	91.973	ENSLAFG00000010710	SCAF4	99	89.886	Loxodonta_africana
ENSNGAG00000005214	Scaf4	99	90.182	ENSMFAG00000037668	SCAF4	99	90.244	Macaca_fascicularis
ENSNGAG00000005214	Scaf4	99	90.174	ENSMMUG00000001712	SCAF4	99	90.157	Macaca_mulatta
ENSNGAG00000005214	Scaf4	99	90.278	ENSMNEG00000032966	SCAF4	99	89.991	Macaca_nemestrina
ENSNGAG00000005214	Scaf4	99	90.418	ENSMLEG00000039674	SCAF4	100	89.583	Mandrillus_leucophaeus
ENSNGAG00000005214	Scaf4	99	75.721	ENSMGAG00000014515	SCAF4	58	82.226	Meleagris_gallopavo
ENSNGAG00000005214	Scaf4	99	89.701	ENSMAUG00000013307	Scaf4	100	90.053	Mesocricetus_auratus
ENSNGAG00000005214	Scaf4	99	91.667	ENSMICG00000005256	SCAF4	99	91.821	Microcebus_murinus
ENSNGAG00000005214	Scaf4	99	86.186	ENSMOCG00000012087	Scaf4	99	87.402	Microtus_ochrogaster
ENSNGAG00000005214	Scaf4	99	82.399	ENSMODG00000021040	SCAF4	99	81.563	Monodelphis_domestica
ENSNGAG00000005214	Scaf4	99	89.744	MGP_CAROLIEiJ_G0020944	Scaf4	96	89.541	Mus_caroli
ENSNGAG00000005214	Scaf4	99	90.206	ENSMUSG00000022983	Scaf4	96	90.128	Mus_musculus
ENSNGAG00000005214	Scaf4	97	89.281	MGP_PahariEiJ_G0016649	Scaf4	99	87.728	Mus_pahari
ENSNGAG00000005214	Scaf4	99	84.992	MGP_SPRETEiJ_G0021850	Scaf4	99	85.240	Mus_spretus
ENSNGAG00000005214	Scaf4	99	89.565	ENSMPUG00000001078	SCAF4	99	89.364	Mustela_putorius_furo
ENSNGAG00000005214	Scaf4	96	76.042	ENSMLUG00000011472	SCAF4	77	82.418	Myotis_lucifugus
ENSNGAG00000005214	Scaf4	99	91.339	ENSNLEG00000003569	SCAF4	99	91.674	Nomascus_leucogenys
ENSNGAG00000005214	Scaf4	85	90.761	ENSOPRG00000007016	SCAF4	77	90.761	Ochotona_princeps
ENSNGAG00000005214	Scaf4	99	89.255	ENSODEG00000002718	SCAF4	99	89.775	Octodon_degus
ENSNGAG00000005214	Scaf4	71	56.927	ENSONIG00000004687	scaf4a	52	75.000	Oreochromis_niloticus
ENSNGAG00000005214	Scaf4	99	87.369	ENSOCUG00000008336	SCAF4	99	87.074	Oryctolagus_cuniculus
ENSNGAG00000005214	Scaf4	99	92.085	ENSOGAG00000014653	SCAF4	94	92.085	Otolemur_garnettii
ENSNGAG00000005214	Scaf4	99	89.248	ENSOARG00000013894	SCAF4	99	87.879	Ovis_aries
ENSNGAG00000005214	Scaf4	99	91.339	ENSPPAG00000028535	SCAF4	99	91.579	Pan_paniscus
ENSNGAG00000005214	Scaf4	99	91.045	ENSPPRG00000000635	SCAF4	100	89.764	Panthera_pardus
ENSNGAG00000005214	Scaf4	99	88.411	ENSPTIG00000021578	SCAF4	99	86.152	Panthera_tigris_altaica
ENSNGAG00000005214	Scaf4	99	91.339	ENSPTRG00000013848	SCAF4	99	91.579	Pan_troglodytes
ENSNGAG00000005214	Scaf4	99	90.669	ENSPANG00000017332	SCAF4	99	90.422	Papio_anubis
ENSNGAG00000005214	Scaf4	64	63.081	ENSPKIG00000022408	scaf4a	90	65.723	Paramormyrops_kingsleyae
ENSNGAG00000005214	Scaf4	99	76.182	ENSPSIG00000014242	SCAF4	57	83.153	Pelodiscus_sinensis
ENSNGAG00000005214	Scaf4	61	85.143	ENSPCIG00000028183	SCAF4	91	80.194	Phascolarctos_cinereus
ENSNGAG00000005214	Scaf4	99	91.308	ENSPPYG00000011355	SCAF4	100	90.877	Pongo_abelii
ENSNGAG00000005214	Scaf4	69	82.911	ENSPCAG00000009998	SCAF4	99	79.068	Procavia_capensis
ENSNGAG00000005214	Scaf4	99	91.012	ENSPCOG00000018710	SCAF4	99	90.901	Propithecus_coquereli
ENSNGAG00000005214	Scaf4	99	89.825	ENSPVAG00000005220	SCAF4	99	89.710	Pteropus_vampyrus
ENSNGAG00000005214	Scaf4	76	56.951	ENSPNAG00000016892	scaf4a	60	62.444	Pygocentrus_nattereri
ENSNGAG00000005214	Scaf4	99	80.571	ENSRNOG00000002104	Scaf4	99	87.728	Rattus_norvegicus
ENSNGAG00000005214	Scaf4	99	89.298	ENSRBIG00000040007	SCAF4	99	87.175	Rhinopithecus_bieti
ENSNGAG00000005214	Scaf4	99	90.885	ENSRROG00000029488	SCAF4	99	90.949	Rhinopithecus_roxellana
ENSNGAG00000005214	Scaf4	99	82.647	ENSSHAG00000001581	SCAF4	99	81.618	Sarcophilus_harrisii
ENSNGAG00000005214	Scaf4	66	53.701	ENSSFOG00015006338	scaf4a	54	58.577	Scleropages_formosus
ENSNGAG00000005214	Scaf4	65	59.542	ENSSMAG00000003738	scaf4b	53	72.785	Scophthalmus_maximus
ENSNGAG00000005214	Scaf4	63	61.194	ENSSDUG00000012380	scaf4b	54	71.519	Seriola_dumerili
ENSNGAG00000005214	Scaf4	63	61.194	ENSSLDG00000023152	-	54	71.519	Seriola_lalandi_dorsalis
ENSNGAG00000005214	Scaf4	99	86.870	ENSSARG00000009994	SCAF4	99	86.372	Sorex_araneus
ENSNGAG00000005214	Scaf4	99	88.087	ENSSSCG00000021023	SCAF4	99	87.881	Sus_scrofa
ENSNGAG00000005214	Scaf4	74	72.138	ENSTGUG00000013464	SCAF4	62	71.151	Taeniopygia_guttata
ENSNGAG00000005214	Scaf4	50	56.884	ENSTRUG00000009536	-	64	58.779	Takifugu_rubripes
ENSNGAG00000005214	Scaf4	99	89.903	ENSTTRG00000010963	SCAF4	100	88.801	Tursiops_truncatus
ENSNGAG00000005214	Scaf4	99	88.421	ENSUAMG00000008860	SCAF4	99	87.413	Ursus_americanus
ENSNGAG00000005214	Scaf4	99	88.722	ENSUMAG00000016962	SCAF4	100	88.811	Ursus_maritimus
ENSNGAG00000005214	Scaf4	99	91.013	ENSVVUG00000002953	SCAF4	100	90.018	Vulpes_vulpes
ENSNGAG00000005214	Scaf4	99	54.195	ENSXETG00000007351	scaf4	62	61.693	Xenopus_tropicalis