EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000005305 (Gene tree)
Gene ID: 103730512
Gene Symbol: Prpf8
Alias: D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 33003 bases
Position: chrKL199813.1:3142574-3175576
Accession: 103730512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004294	RRM_4	PF10598.9	3e-48	1	1
ENSNGAP00000004283	RRM_4	PF10598.9	3e-48	1	1
ENSNGAP00000004294	U5_2-snRNA_bdg	PF10597.9	5.8e-74	1	1
ENSNGAP00000004283	U5_2-snRNA_bdg	PF10597.9	5.8e-74	1	1
ENSNGAP00000004294	PRO8NT	PF08082.11	1.2e-86	1	1
ENSNGAP00000004283	PRO8NT	PF08082.11	1.2e-86	1	1
ENSNGAP00000004283	U6-snRNA_bdg	PF10596.9	2.9e-53	1	1
ENSNGAP00000004294	U6-snRNA_bdg	PF10596.9	5.4e-53	1	1
ENSNGAP00000004294	PROCN	PF08083.11	1.5e-235	1	1
ENSNGAP00000004283	PROCN	PF08083.11	1.5e-235	1	1
ENSNGAP00000004294	PRP8_domainIV	PF12134.8	3.1e-130	1	1
ENSNGAP00000004283	PRP8_domainIV	PF12134.8	3.1e-130	1	1
ENSNGAP00000004283	PROCT	PF08084.11	1.2e-53	1	1
ENSNGAP00000004294	PROCT	PF08084.11	1.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000006811	-	6921	XM_008828784	ENSNGAP00000004283	2306 (aa)	XP_008827006	-
ENSNGAT00000006836	-	6918	-	ENSNGAP00000004294	2305 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000005305's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000005305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000005305	Prpf8	100	98.201	ENSG00000174231	PRPF8	100	98.201	Homo_sapiens
ENSNGAG00000005305	Prpf8	100	96.067	ENSAPOG00000010079	prpf8	100	96.067	Acanthochromis_polyacanthus
ENSNGAG00000005305	Prpf8	100	98.201	ENSAMEG00000007940	PRPF8	100	98.201	Ailuropoda_melanoleuca
ENSNGAG00000005305	Prpf8	100	93.811	ENSACIG00000018280	prpf8	100	94.185	Amphilophus_citrinellus
ENSNGAG00000005305	Prpf8	100	96.067	ENSAOCG00000010725	prpf8	100	96.067	Amphiprion_ocellaris
ENSNGAG00000005305	Prpf8	100	96.067	ENSAPEG00000014397	prpf8	100	96.067	Amphiprion_percula
ENSNGAG00000005305	Prpf8	100	95.509	ENSATEG00000010062	prpf8	100	95.509	Anabas_testudineus
ENSNGAG00000005305	Prpf8	96	97.687	ENSAPLG00000010357	PRPF8	100	97.687	Anas_platyrhynchos
ENSNGAG00000005305	Prpf8	82	95.366	ENSACAG00000014784	PRPF8	99	95.366	Anolis_carolinensis
ENSNGAG00000005305	Prpf8	100	98.201	ENSANAG00000032629	PRPF8	100	98.201	Aotus_nancymaae
ENSNGAG00000005305	Prpf8	100	95.702	ENSACLG00000020858	prpf8	100	95.702	Astatotilapia_calliptera
ENSNGAG00000005305	Prpf8	100	95.976	ENSAMXG00000020291	prpf8	100	95.976	Astyanax_mexicanus
ENSNGAG00000005305	Prpf8	100	98.201	ENSBTAG00000011488	PRPF8	100	98.201	Bos_taurus
ENSNGAG00000005305	Prpf8	99	84.728	WBGene00004187	prp-8	99	84.813	Caenorhabditis_elegans
ENSNGAG00000005305	Prpf8	100	98.201	ENSCJAG00000001911	PRPF8	100	98.201	Callithrix_jacchus
ENSNGAG00000005305	Prpf8	100	98.201	ENSCAFG00000019221	PRPF8	100	98.201	Canis_familiaris
ENSNGAG00000005305	Prpf8	96	98.126	ENSCAFG00020009943	PRPF8	100	98.126	Canis_lupus_dingo
ENSNGAG00000005305	Prpf8	100	98.201	ENSCHIG00000017499	PRPF8	100	98.201	Capra_hircus
ENSNGAG00000005305	Prpf8	100	98.201	ENSTSYG00000014120	PRPF8	100	98.201	Carlito_syrichta
ENSNGAG00000005305	Prpf8	96	95.902	ENSCAPG00000009459	PRPF8	99	95.902	Cavia_aperea
ENSNGAG00000005305	Prpf8	100	98.201	ENSCPOG00000010379	PRPF8	100	98.201	Cavia_porcellus
ENSNGAG00000005305	Prpf8	100	98.201	ENSCCAG00000031983	-	100	98.201	Cebus_capucinus
ENSNGAG00000005305	Prpf8	100	98.201	ENSCATG00000038595	PRPF8	100	98.201	Cercocebus_atys
ENSNGAG00000005305	Prpf8	100	98.201	ENSCLAG00000004388	PRPF8	100	98.201	Chinchilla_lanigera
ENSNGAG00000005305	Prpf8	100	98.201	ENSCSAG00000013929	PRPF8	100	98.201	Chlorocebus_sabaeus
ENSNGAG00000005305	Prpf8	81	99.738	ENSCHOG00000008590	PRPF8	88	99.738	Choloepus_hoffmanni
ENSNGAG00000005305	Prpf8	100	97.730	ENSCPBG00000020409	PRPF8	100	97.730	Chrysemys_picta_bellii
ENSNGAG00000005305	Prpf8	98	92.874	ENSCSAVG00000007825	-	100	89.844	Ciona_savignyi
ENSNGAG00000005305	Prpf8	100	98.201	ENSCANG00000043088	PRPF8	100	98.201	Colobus_angolensis_palliatus
ENSNGAG00000005305	Prpf8	73	99.533	ENSCGRG00000005129	Prpf8	100	99.533	Cricetulus_griseus_crigri
ENSNGAG00000005305	Prpf8	100	95.896	ENSCSEG00000007905	prpf8	100	95.896	Cynoglossus_semilaevis
ENSNGAG00000005305	Prpf8	100	95.858	ENSDARG00000026180	prpf8	100	95.858	Danio_rerio
ENSNGAG00000005305	Prpf8	93	98.020	ENSDNOG00000018471	PRPF8	99	98.020	Dasypus_novemcinctus
ENSNGAG00000005305	Prpf8	85	99.432	ENSDORG00000006185	Prpf8	96	99.432	Dipodomys_ordii
ENSNGAG00000005305	Prpf8	99	89.790	FBgn0033688	Prp8	98	89.373	Drosophila_melanogaster
ENSNGAG00000005305	Prpf8	100	92.719	ENSETEG00000017592	PRPF8	100	92.719	Echinops_telfairi
ENSNGAG00000005305	Prpf8	99	92.742	ENSEBUG00000006548	prpf8	99	92.089	Eptatretus_burgeri
ENSNGAG00000005305	Prpf8	100	98.201	ENSEASG00005009514	PRPF8	100	98.201	Equus_asinus_asinus
ENSNGAG00000005305	Prpf8	97	98.154	ENSECAG00000021318	PRPF8	100	98.154	Equus_caballus
ENSNGAG00000005305	Prpf8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSNGAG00000005305	Prpf8	98	94.624	ENSELUG00000007120	prpf8	99	94.799	Esox_lucius
ENSNGAG00000005305	Prpf8	100	98.201	ENSFCAG00000006297	PRPF8	100	98.201	Felis_catus
ENSNGAG00000005305	Prpf8	100	97.687	ENSFALG00000006628	PRPF8	100	97.687	Ficedula_albicollis
ENSNGAG00000005305	Prpf8	100	98.201	ENSFDAG00000004711	PRPF8	100	98.201	Fukomys_damarensis
ENSNGAG00000005305	Prpf8	100	95.687	ENSFHEG00000021084	prpf8	100	95.687	Fundulus_heteroclitus
ENSNGAG00000005305	Prpf8	99	94.067	ENSGMOG00000002028	prpf8	99	93.697	Gadus_morhua
ENSNGAG00000005305	Prpf8	100	97.645	ENSGALG00000002943	PRPF8	100	97.645	Gallus_gallus
ENSNGAG00000005305	Prpf8	99	95.767	ENSGAFG00000010337	prpf8	99	95.767	Gambusia_affinis
ENSNGAG00000005305	Prpf8	100	95.760	ENSGACG00000008504	prpf8	100	95.760	Gasterosteus_aculeatus
ENSNGAG00000005305	Prpf8	100	97.730	ENSGAGG00000008350	PRPF8	100	97.730	Gopherus_agassizii
ENSNGAG00000005305	Prpf8	100	98.201	ENSGGOG00000005516	PRPF8	100	98.201	Gorilla_gorilla
ENSNGAG00000005305	Prpf8	100	95.849	ENSHBUG00000016192	prpf8	100	95.849	Haplochromis_burtoni
ENSNGAG00000005305	Prpf8	100	98.201	ENSHGLG00000012029	PRPF8	100	98.201	Heterocephalus_glaber_female
ENSNGAG00000005305	Prpf8	100	98.201	ENSHGLG00100016494	PRPF8	100	98.201	Heterocephalus_glaber_male
ENSNGAG00000005305	Prpf8	100	95.810	ENSHCOG00000016414	prpf8	100	95.810	Hippocampus_comes
ENSNGAG00000005305	Prpf8	100	95.851	ENSIPUG00000023230	prpf8	100	95.851	Ictalurus_punctatus
ENSNGAG00000005305	Prpf8	100	98.201	ENSSTOG00000005128	PRPF8	100	98.201	Ictidomys_tridecemlineatus
ENSNGAG00000005305	Prpf8	100	97.269	ENSJJAG00000021159	Prpf8	100	97.269	Jaculus_jaculus
ENSNGAG00000005305	Prpf8	99	96.212	ENSKMAG00000016118	prpf8	99	96.212	Kryptolebias_marmoratus
ENSNGAG00000005305	Prpf8	100	95.767	ENSLBEG00000026903	prpf8	100	95.767	Labrus_bergylta
ENSNGAG00000005305	Prpf8	95	94.221	ENSLACG00000010479	PRPF8	99	96.570	Latimeria_chalumnae
ENSNGAG00000005305	Prpf8	99	95.976	ENSLOCG00000005409	prpf8	99	95.976	Lepisosteus_oculatus
ENSNGAG00000005305	Prpf8	100	98.201	ENSLAFG00000015445	PRPF8	100	98.201	Loxodonta_africana
ENSNGAG00000005305	Prpf8	100	98.201	ENSMFAG00000039995	PRPF8	100	98.201	Macaca_fascicularis
ENSNGAG00000005305	Prpf8	100	98.201	ENSMMUG00000004820	PRPF8	100	98.201	Macaca_mulatta
ENSNGAG00000005305	Prpf8	100	98.201	ENSMNEG00000035713	PRPF8	100	98.201	Macaca_nemestrina
ENSNGAG00000005305	Prpf8	100	98.201	ENSMLEG00000037937	PRPF8	100	98.201	Mandrillus_leucophaeus
ENSNGAG00000005305	Prpf8	100	96.022	ENSMAMG00000008919	prpf8	100	96.022	Mastacembelus_armatus
ENSNGAG00000005305	Prpf8	100	95.702	ENSMZEG00005015073	prpf8	100	95.702	Maylandia_zebra
ENSNGAG00000005305	Prpf8	100	97.645	ENSMGAG00000004769	PRPF8	100	97.645	Meleagris_gallopavo
ENSNGAG00000005305	Prpf8	100	98.244	ENSMICG00000010320	PRPF8	99	99.688	Microcebus_murinus
ENSNGAG00000005305	Prpf8	100	98.244	ENSMOCG00000016838	Prpf8	100	98.244	Microtus_ochrogaster
ENSNGAG00000005305	Prpf8	100	95.552	ENSMMOG00000011887	prpf8	100	95.552	Mola_mola
ENSNGAG00000005305	Prpf8	100	98.030	ENSMODG00000010480	PRPF8	100	98.030	Monodelphis_domestica
ENSNGAG00000005305	Prpf8	97	94.177	ENSMALG00000003558	prpf8	100	94.177	Monopterus_albus
ENSNGAG00000005305	Prpf8	100	98.201	MGP_CAROLIEiJ_G0016740	Prpf8	100	98.201	Mus_caroli
ENSNGAG00000005305	Prpf8	100	98.201	ENSMUSG00000020850	Prpf8	100	98.201	Mus_musculus
ENSNGAG00000005305	Prpf8	100	98.116	MGP_PahariEiJ_G0017877	Prpf8	100	98.116	Mus_pahari
ENSNGAG00000005305	Prpf8	100	98.201	MGP_SPRETEiJ_G0017583	Prpf8	100	98.201	Mus_spretus
ENSNGAG00000005305	Prpf8	100	98.201	ENSMPUG00000013227	PRPF8	100	98.201	Mustela_putorius_furo
ENSNGAG00000005305	Prpf8	100	98.033	ENSMLUG00000002666	PRPF8	100	98.033	Myotis_lucifugus
ENSNGAG00000005305	Prpf8	100	95.745	ENSNBRG00000013127	prpf8	100	95.745	Neolamprologus_brichardi
ENSNGAG00000005305	Prpf8	97	95.078	ENSNLEG00000000897	PRPF8	98	95.078	Nomascus_leucogenys
ENSNGAG00000005305	Prpf8	99	96.219	ENSMEUG00000015999	PRPF8	100	96.219	Notamacropus_eugenii
ENSNGAG00000005305	Prpf8	100	96.745	ENSOPRG00000003102	PRPF8	100	96.745	Ochotona_princeps
ENSNGAG00000005305	Prpf8	100	98.201	ENSODEG00000008468	PRPF8	100	98.201	Octodon_degus
ENSNGAG00000005305	Prpf8	100	95.746	ENSONIG00000008153	prpf8	100	95.746	Oreochromis_niloticus
ENSNGAG00000005305	Prpf8	82	99.645	ENSOANG00000004250	PRPF8	97	99.645	Ornithorhynchus_anatinus
ENSNGAG00000005305	Prpf8	100	98.201	ENSOCUG00000000081	PRPF8	100	98.201	Oryctolagus_cuniculus
ENSNGAG00000005305	Prpf8	99	95.931	ENSORLG00000008036	prpf8	99	95.931	Oryzias_latipes
ENSNGAG00000005305	Prpf8	99	95.890	ENSORLG00020021070	prpf8	99	95.890	Oryzias_latipes_hni
ENSNGAG00000005305	Prpf8	99	95.931	ENSORLG00015002340	prpf8	99	95.931	Oryzias_latipes_hsok
ENSNGAG00000005305	Prpf8	99	94.769	ENSOMEG00000016866	prpf8	99	94.430	Oryzias_melastigma
ENSNGAG00000005305	Prpf8	100	98.075	ENSOARG00000013312	PRPF8	100	98.075	Ovis_aries
ENSNGAG00000005305	Prpf8	100	98.201	ENSPPAG00000042753	PRPF8	100	98.201	Pan_paniscus
ENSNGAG00000005305	Prpf8	100	98.201	ENSPPRG00000008746	PRPF8	100	98.201	Panthera_pardus
ENSNGAG00000005305	Prpf8	100	98.116	ENSPTIG00000019200	PRPF8	100	98.116	Panthera_tigris_altaica
ENSNGAG00000005305	Prpf8	100	98.201	ENSPTRG00000039576	PRPF8	100	98.201	Pan_troglodytes
ENSNGAG00000005305	Prpf8	99	97.256	ENSPANG00000024607	PRPF8	99	97.256	Papio_anubis
ENSNGAG00000005305	Prpf8	100	95.574	ENSPKIG00000011201	prpf8	100	95.574	Paramormyrops_kingsleyae
ENSNGAG00000005305	Prpf8	100	97.687	ENSPSIG00000013393	PRPF8	100	97.687	Pelodiscus_sinensis
ENSNGAG00000005305	Prpf8	100	98.244	ENSPEMG00000021699	Prpf8	100	98.244	Peromyscus_maniculatus_bairdii
ENSNGAG00000005305	Prpf8	96	92.071	ENSPMAG00000005438	prpf8	100	92.116	Petromyzon_marinus
ENSNGAG00000005305	Prpf8	100	98.030	ENSPCIG00000022603	PRPF8	100	98.030	Phascolarctos_cinereus
ENSNGAG00000005305	Prpf8	100	95.252	ENSPFOG00000007005	prpf8	100	95.252	Poecilia_formosa
ENSNGAG00000005305	Prpf8	100	94.604	ENSPLAG00000020777	prpf8	100	94.647	Poecilia_latipinna
ENSNGAG00000005305	Prpf8	100	95.252	ENSPMEG00000004051	prpf8	100	95.252	Poecilia_mexicana
ENSNGAG00000005305	Prpf8	100	95.889	ENSPREG00000021902	prpf8	100	95.889	Poecilia_reticulata
ENSNGAG00000005305	Prpf8	100	98.201	ENSPPYG00000007777	PRPF8	100	98.201	Pongo_abelii
ENSNGAG00000005305	Prpf8	90	99.647	ENSPCAG00000008938	PRPF8	90	99.647	Procavia_capensis
ENSNGAG00000005305	Prpf8	100	98.244	ENSPCOG00000015182	PRPF8	100	98.244	Propithecus_coquereli
ENSNGAG00000005305	Prpf8	93	100.000	ENSPVAG00000002134	PRPF8	93	100.000	Pteropus_vampyrus
ENSNGAG00000005305	Prpf8	100	95.849	ENSPNYG00000016356	prpf8	100	95.849	Pundamilia_nyererei
ENSNGAG00000005305	Prpf8	100	95.894	ENSPNAG00000009247	prpf8	100	95.894	Pygocentrus_nattereri
ENSNGAG00000005305	Prpf8	100	98.201	ENSRNOG00000003495	Prpf8	100	98.201	Rattus_norvegicus
ENSNGAG00000005305	Prpf8	100	98.201	ENSRBIG00000031219	PRPF8	100	98.201	Rhinopithecus_bieti
ENSNGAG00000005305	Prpf8	100	98.201	ENSRROG00000038014	PRPF8	100	98.201	Rhinopithecus_roxellana
ENSNGAG00000005305	Prpf8	99	60.879	YHR165C	PRP8	95	60.879	Saccharomyces_cerevisiae
ENSNGAG00000005305	Prpf8	100	98.201	ENSSBOG00000029717	PRPF8	100	98.201	Saimiri_boliviensis_boliviensis
ENSNGAG00000005305	Prpf8	100	97.987	ENSSHAG00000006167	PRPF8	100	97.987	Sarcophilus_harrisii
ENSNGAG00000005305	Prpf8	100	95.773	ENSSFOG00015013905	prpf8	100	95.773	Scleropages_formosus
ENSNGAG00000005305	Prpf8	100	95.643	ENSSMAG00000017736	prpf8	100	95.643	Scophthalmus_maximus
ENSNGAG00000005305	Prpf8	100	96.022	ENSSDUG00000003029	prpf8	100	96.022	Seriola_dumerili
ENSNGAG00000005305	Prpf8	68	96.433	ENSSLDG00000017096	prpf8	100	96.433	Seriola_lalandi_dorsalis
ENSNGAG00000005305	Prpf8	87	99.395	ENSSARG00000002892	PRPF8	87	99.395	Sorex_araneus
ENSNGAG00000005305	Prpf8	100	97.516	ENSSPUG00000007463	PRPF8	100	97.516	Sphenodon_punctatus
ENSNGAG00000005305	Prpf8	100	95.468	ENSSPAG00000015639	prpf8	100	95.468	Stegastes_partitus
ENSNGAG00000005305	Prpf8	100	98.201	ENSSSCG00000017817	PRPF8	100	98.201	Sus_scrofa
ENSNGAG00000005305	Prpf8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSNGAG00000005305	Prpf8	100	97.687	ENSTGUG00000005648	-	100	97.687	Taeniopygia_guttata
ENSNGAG00000005305	Prpf8	100	95.853	ENSTRUG00000015906	prpf8	100	95.853	Takifugu_rubripes
ENSNGAG00000005305	Prpf8	94	96.296	ENSTNIG00000003460	prpf8	99	96.296	Tetraodon_nigroviridis
ENSNGAG00000005305	Prpf8	92	97.141	ENSTBEG00000006431	PRPF8	93	97.141	Tupaia_belangeri
ENSNGAG00000005305	Prpf8	100	97.602	ENSTTRG00000006869	PRPF8	100	97.602	Tursiops_truncatus
ENSNGAG00000005305	Prpf8	55	99.921	ENSUAMG00000015644	-	96	99.921	Ursus_americanus
ENSNGAG00000005305	Prpf8	100	97.944	ENSUMAG00000009385	PRPF8	100	97.944	Ursus_maritimus
ENSNGAG00000005305	Prpf8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSNGAG00000005305	Prpf8	100	98.201	ENSVVUG00000021695	PRPF8	99	98.201	Vulpes_vulpes
ENSNGAG00000005305	Prpf8	100	97.003	ENSXETG00000022259	prpf8	100	97.003	Xenopus_tropicalis
ENSNGAG00000005305	Prpf8	100	95.816	ENSXCOG00000012775	prpf8	100	95.816	Xiphophorus_couchianus
ENSNGAG00000005305	Prpf8	100	95.773	ENSXMAG00000008505	prpf8	100	95.773	Xiphophorus_maculatus