EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000005550 (Gene tree)
Gene ID: 103738779
Gene Symbol: Sf1
Alias: CW17R|MZFM|WBP4|Zfp162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 14016 bases
Position: chrKL201795.1:374404-388419
Accession: 103738779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004287	KH_1	PF00013.29	2.2e-07	1	1
ENSNGAP00000004279	KH_1	PF00013.29	2.6e-07	1	1
ENSNGAP00000004287	zf-CCHC	PF00098.23	0.00013	1	1
ENSNGAP00000004279	zf-CCHC	PF00098.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000006815	-	2911	XM_008838909	ENSNGAP00000004287	571 (aa)	XP_008837131	UPI0004ED3914
ENSNGAT00000006799	-	4007	XM_008838906	ENSNGAP00000004279	638 (aa)	XP_008837128	UPI0004ED2737

Gene Model

Click here to download ENSNGAG00000005550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000005550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000005550	Sf1	66	81.186	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSNGAG00000005550	Sf1	99	91.446	ENSAMEG00000017828	SF1	83	99.625	Ailuropoda_melanoleuca
ENSNGAG00000005550	Sf1	65	82.979	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSNGAG00000005550	Sf1	66	80.670	ENSAOCG00000010934	sf1	61	76.112	Amphiprion_ocellaris
ENSNGAG00000005550	Sf1	66	80.670	ENSAPEG00000009498	sf1	61	76.112	Amphiprion_percula
ENSNGAG00000005550	Sf1	65	81.842	ENSATEG00000001894	sf1	60	77.566	Anabas_testudineus
ENSNGAG00000005550	Sf1	100	99.530	ENSANAG00000026664	-	100	99.530	Aotus_nancymaae
ENSNGAG00000005550	Sf1	92	88.034	ENSANAG00000022607	-	99	86.455	Aotus_nancymaae
ENSNGAG00000005550	Sf1	64	84.553	ENSACLG00000007633	sf1	61	79.805	Astatotilapia_calliptera
ENSNGAG00000005550	Sf1	64	86.364	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSNGAG00000005550	Sf1	94	99.499	ENSBTAG00000001035	SF1	94	99.499	Bos_taurus
ENSNGAG00000005550	Sf1	100	99.687	ENSCJAG00000002780	SF1	100	99.687	Callithrix_jacchus
ENSNGAG00000005550	Sf1	100	99.687	ENSCAFG00000014239	SF1	100	99.687	Canis_familiaris
ENSNGAG00000005550	Sf1	100	99.687	ENSCAFG00020014381	SF1	100	99.687	Canis_lupus_dingo
ENSNGAG00000005550	Sf1	94	99.499	ENSCHIG00000025867	SF1	97	99.433	Capra_hircus
ENSNGAG00000005550	Sf1	53	98.925	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSNGAG00000005550	Sf1	98	97.679	ENSCAPG00000010762	SF1	100	97.679	Cavia_aperea
ENSNGAG00000005550	Sf1	98	99.203	ENSCPOG00000012290	SF1	100	99.203	Cavia_porcellus
ENSNGAG00000005550	Sf1	100	99.687	ENSCCAG00000037881	SF1	100	99.687	Cebus_capucinus
ENSNGAG00000005550	Sf1	89	85.114	ENSCCAG00000023781	-	94	84.982	Cebus_capucinus
ENSNGAG00000005550	Sf1	100	99.687	ENSCATG00000011564	SF1	100	99.687	Cercocebus_atys
ENSNGAG00000005550	Sf1	83	99.433	ENSCSAG00000007258	SF1	97	99.433	Chlorocebus_sabaeus
ENSNGAG00000005550	Sf1	72	93.447	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSNGAG00000005550	Sf1	81	86.680	ENSCPBG00000023763	SF1	66	85.328	Chrysemys_picta_bellii
ENSNGAG00000005550	Sf1	54	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSNGAG00000005550	Sf1	90	47.579	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSNGAG00000005550	Sf1	100	99.687	ENSCANG00000042201	SF1	100	99.687	Colobus_angolensis_palliatus
ENSNGAG00000005550	Sf1	100	97.723	ENSCGRG00001003677	Sf1	100	97.723	Cricetulus_griseus_chok1gshd
ENSNGAG00000005550	Sf1	98	97.679	ENSCGRG00000001708	Sf1	100	97.679	Cricetulus_griseus_crigri
ENSNGAG00000005550	Sf1	69	78.571	ENSCSEG00000014375	sf1	57	76.755	Cynoglossus_semilaevis
ENSNGAG00000005550	Sf1	65	84.595	ENSCVAG00000001670	sf1	63	79.218	Cyprinodon_variegatus
ENSNGAG00000005550	Sf1	70	81.638	ENSDARG00000008188	sf1	72	79.021	Danio_rerio
ENSNGAG00000005550	Sf1	83	98.866	ENSDNOG00000001282	SF1	97	98.866	Dasypus_novemcinctus
ENSNGAG00000005550	Sf1	100	99.530	ENSDORG00000016334	Sf1	100	99.530	Dipodomys_ordii
ENSNGAG00000005550	Sf1	87	92.072	ENSETEG00000012830	SF1	82	91.282	Echinops_telfairi
ENSNGAG00000005550	Sf1	83	99.055	ENSEASG00005018272	SF1	97	99.055	Equus_asinus_asinus
ENSNGAG00000005550	Sf1	83	99.244	ENSECAG00000024544	SF1	97	99.244	Equus_caballus
ENSNGAG00000005550	Sf1	69	98.982	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSNGAG00000005550	Sf1	65	81.698	ENSELUG00000013225	sf1	54	78.469	Esox_lucius
ENSNGAG00000005550	Sf1	100	99.687	ENSFCAG00000012231	SF1	100	99.687	Felis_catus
ENSNGAG00000005550	Sf1	98	98.750	ENSFDAG00000009833	SF1	100	98.750	Fukomys_damarensis
ENSNGAG00000005550	Sf1	66	80.412	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSNGAG00000005550	Sf1	58	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSNGAG00000005550	Sf1	66	84.156	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSNGAG00000005550	Sf1	67	80.506	ENSGACG00000000826	sf1	68	76.485	Gasterosteus_aculeatus
ENSNGAG00000005550	Sf1	74	89.858	ENSGAGG00000021691	SF1	72	85.328	Gopherus_agassizii
ENSNGAG00000005550	Sf1	65	83.158	ENSHBUG00000011598	sf1	61	77.494	Haplochromis_burtoni
ENSNGAG00000005550	Sf1	100	99.530	ENSHGLG00000009541	SF1	100	99.530	Heterocephalus_glaber_female
ENSNGAG00000005550	Sf1	98	98.393	ENSHGLG00100013879	-	100	98.393	Heterocephalus_glaber_male
ENSNGAG00000005550	Sf1	76	86.667	ENSHGLG00100008255	-	94	86.134	Heterocephalus_glaber_male
ENSNGAG00000005550	Sf1	70	88.972	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSNGAG00000005550	Sf1	66	81.347	ENSHCOG00000011388	sf1	58	76.998	Hippocampus_comes
ENSNGAG00000005550	Sf1	98	85.053	ENSSTOG00000024353	-	98	85.053	Ictidomys_tridecemlineatus
ENSNGAG00000005550	Sf1	98	99.362	ENSSTOG00000009790	-	100	99.362	Ictidomys_tridecemlineatus
ENSNGAG00000005550	Sf1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSNGAG00000005550	Sf1	67	82.653	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSNGAG00000005550	Sf1	65	82.723	ENSLBEG00000019836	sf1	64	78.469	Labrus_bergylta
ENSNGAG00000005550	Sf1	73	78.571	ENSLACG00000018493	SF1	74	78.795	Latimeria_chalumnae
ENSNGAG00000005550	Sf1	65	85.146	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSNGAG00000005550	Sf1	99	95.349	ENSLAFG00000007201	SF1	100	95.349	Loxodonta_africana
ENSNGAG00000005550	Sf1	100	99.687	ENSMFAG00000033122	SF1	100	99.687	Macaca_fascicularis
ENSNGAG00000005550	Sf1	100	99.687	ENSMMUG00000022606	SF1	100	99.687	Macaca_mulatta
ENSNGAG00000005550	Sf1	100	95.593	ENSMNEG00000037901	SF1	100	95.593	Macaca_nemestrina
ENSNGAG00000005550	Sf1	98	99.682	ENSMLEG00000040706	SF1	95	99.682	Mandrillus_leucophaeus
ENSNGAG00000005550	Sf1	66	81.606	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSNGAG00000005550	Sf1	65	82.895	ENSMZEG00005009196	sf1	61	77.262	Maylandia_zebra
ENSNGAG00000005550	Sf1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSNGAG00000005550	Sf1	100	99.373	ENSMICG00000001202	SF1	100	99.373	Microcebus_murinus
ENSNGAG00000005550	Sf1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSNGAG00000005550	Sf1	65	81.989	ENSMMOG00000020474	sf1	60	76.642	Mola_mola
ENSNGAG00000005550	Sf1	75	98.126	ENSMODG00000029407	SF1	97	94.631	Monodelphis_domestica
ENSNGAG00000005550	Sf1	65	83.155	ENSMALG00000020521	sf1	68	76.596	Monopterus_albus
ENSNGAG00000005550	Sf1	100	99.216	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSNGAG00000005550	Sf1	100	99.216	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSNGAG00000005550	Sf1	100	98.903	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSNGAG00000005550	Sf1	100	99.216	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSNGAG00000005550	Sf1	93	99.323	ENSMPUG00000012684	SF1	92	99.323	Mustela_putorius_furo
ENSNGAG00000005550	Sf1	93	99.154	ENSMLUG00000015217	-	92	99.154	Myotis_lucifugus
ENSNGAG00000005550	Sf1	79	93.792	ENSMLUG00000029800	-	78	94.714	Myotis_lucifugus
ENSNGAG00000005550	Sf1	65	83.957	ENSNBRG00000017606	sf1	60	79.805	Neolamprologus_brichardi
ENSNGAG00000005550	Sf1	100	99.530	ENSNLEG00000005236	-	100	99.530	Nomascus_leucogenys
ENSNGAG00000005550	Sf1	80	98.441	ENSMEUG00000013424	SF1	97	98.441	Notamacropus_eugenii
ENSNGAG00000005550	Sf1	74	98.947	ENSOPRG00000005008	SF1	96	98.947	Ochotona_princeps
ENSNGAG00000005550	Sf1	100	89.368	ENSODEG00000006102	-	100	87.519	Octodon_degus
ENSNGAG00000005550	Sf1	65	82.632	ENSONIG00000015728	sf1	61	77.030	Oreochromis_niloticus
ENSNGAG00000005550	Sf1	62	87.430	ENSOANG00000002909	SF1	96	87.468	Ornithorhynchus_anatinus
ENSNGAG00000005550	Sf1	99	99.524	ENSOCUG00000026486	SF1	100	99.524	Oryctolagus_cuniculus
ENSNGAG00000005550	Sf1	67	80.818	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSNGAG00000005550	Sf1	68	79.500	ENSORLG00020011834	sf1	60	75.822	Oryzias_latipes_hni
ENSNGAG00000005550	Sf1	65	80.628	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSNGAG00000005550	Sf1	67	79.795	ENSOMEG00000005210	sf1	61	76.056	Oryzias_melastigma
ENSNGAG00000005550	Sf1	100	99.530	ENSOGAG00000016196	SF1	100	99.530	Otolemur_garnettii
ENSNGAG00000005550	Sf1	83	94.946	ENSOARG00000009166	SF1	82	99.786	Ovis_aries
ENSNGAG00000005550	Sf1	99	96.044	ENSPPAG00000002799	-	100	96.044	Pan_paniscus
ENSNGAG00000005550	Sf1	98	99.681	ENSPPRG00000013566	SF1	98	99.681	Panthera_pardus
ENSNGAG00000005550	Sf1	99	90.442	ENSPTIG00000016141	SF1	99	88.042	Panthera_tigris_altaica
ENSNGAG00000005550	Sf1	100	99.687	ENSPTRG00000003846	SF1	100	99.687	Pan_troglodytes
ENSNGAG00000005550	Sf1	100	95.593	ENSPANG00000020754	SF1	97	99.433	Papio_anubis
ENSNGAG00000005550	Sf1	58	78.529	ENSPKIG00000012116	sf1	88	74.212	Paramormyrops_kingsleyae
ENSNGAG00000005550	Sf1	56	88.125	ENSPSIG00000003610	SF1	84	82.944	Pelodiscus_sinensis
ENSNGAG00000005550	Sf1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSNGAG00000005550	Sf1	59	72.321	ENSPMAG00000008272	sf1	53	67.027	Petromyzon_marinus
ENSNGAG00000005550	Sf1	100	98.276	ENSPCIG00000018173	SF1	100	98.276	Phascolarctos_cinereus
ENSNGAG00000005550	Sf1	66	86.016	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSNGAG00000005550	Sf1	65	84.127	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSNGAG00000005550	Sf1	65	84.127	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSNGAG00000005550	Sf1	65	83.202	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSNGAG00000005550	Sf1	100	99.530	ENSPPYG00000003098	-	100	99.530	Pongo_abelii
ENSNGAG00000005550	Sf1	82	97.719	ENSPCAG00000013631	SF1	78	97.719	Procavia_capensis
ENSNGAG00000005550	Sf1	100	99.530	ENSPCOG00000027546	SF1	100	99.530	Propithecus_coquereli
ENSNGAG00000005550	Sf1	82	97.719	ENSPVAG00000016938	SF1	79	97.719	Pteropus_vampyrus
ENSNGAG00000005550	Sf1	65	82.895	ENSPNYG00000004673	sf1	59	78.436	Pundamilia_nyererei
ENSNGAG00000005550	Sf1	65	85.714	ENSPNAG00000013072	sf1	59	80.049	Pygocentrus_nattereri
ENSNGAG00000005550	Sf1	94	99.165	ENSRNOG00000021085	Sf1	94	99.165	Rattus_norvegicus
ENSNGAG00000005550	Sf1	100	95.611	ENSRBIG00000042818	SF1	100	95.611	Rhinopithecus_bieti
ENSNGAG00000005550	Sf1	100	97.373	ENSRROG00000045655	SF1	100	97.373	Rhinopithecus_roxellana
ENSNGAG00000005550	Sf1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSNGAG00000005550	Sf1	93	79.323	ENSSBOG00000022267	-	99	81.490	Saimiri_boliviensis_boliviensis
ENSNGAG00000005550	Sf1	71	92.195	ENSSHAG00000006841	SF1	75	93.415	Sarcophilus_harrisii
ENSNGAG00000005550	Sf1	69	80.702	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSNGAG00000005550	Sf1	72	76.347	ENSSMAG00000007549	sf1	63	76.761	Scophthalmus_maximus
ENSNGAG00000005550	Sf1	66	80.463	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSNGAG00000005550	Sf1	66	80.463	ENSSLDG00000013075	sf1	61	76.636	Seriola_lalandi_dorsalis
ENSNGAG00000005550	Sf1	81	95.551	ENSSARG00000008180	SF1	100	95.551	Sorex_araneus
ENSNGAG00000005550	Sf1	79	82.950	ENSSPUG00000012907	SF1	86	81.418	Sphenodon_punctatus
ENSNGAG00000005550	Sf1	66	80.670	ENSSPAG00000019060	sf1	61	76.112	Stegastes_partitus
ENSNGAG00000005550	Sf1	100	99.373	ENSSSCG00000013021	SF1	100	99.373	Sus_scrofa
ENSNGAG00000005550	Sf1	84	62.983	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSNGAG00000005550	Sf1	72	92.795	ENSTBEG00000013133	SF1	66	92.763	Tupaia_belangeri
ENSNGAG00000005550	Sf1	81	94.981	ENSTTRG00000008857	SF1	96	95.349	Tursiops_truncatus
ENSNGAG00000005550	Sf1	75	96.674	ENSUAMG00000011977	SF1	92	96.674	Ursus_americanus
ENSNGAG00000005550	Sf1	99	88.772	ENSUMAG00000007268	SF1	90	98.636	Ursus_maritimus
ENSNGAG00000005550	Sf1	60	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSNGAG00000005550	Sf1	83	99.433	ENSVVUG00000028585	SF1	97	99.433	Vulpes_vulpes
ENSNGAG00000005550	Sf1	93	68.852	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSNGAG00000005550	Sf1	64	85.479	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSNGAG00000005550	Sf1	65	83.641	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus