EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000005838 (Gene tree)
Gene ID: 103748102
Gene Symbol: Rab1a
Alias: Gtbp|Rab-1|Rab1|Ypt1|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 38507 bases
Position: chrKL204026.1:2244792-2283298
Accession: 103748102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004451	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000007151	-	2542	XM_008850640	ENSNGAP00000004451	205 (aa)	XP_008848862	UPI0000001259
ENSNGAT00000007161	-	381	-	ENSNGAP00000004454	126 (aa)	-	UPI0000208584
ENSNGAT00000007156	-	417	-	ENSNGAP00000004453	138 (aa)	-	UPI00004704BB

Gene Model

Click here to download ENSNGAG00000005838's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000005838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000005838	Rab1a	94	37.374	ENSNGAG00000014566	Rab6a	94	37.374
ENSNGAG00000005838	Rab1a	80	50.909	ENSNGAG00000022101	Rab15	78	50.909
ENSNGAG00000005838	Rab1a	57	31.933	ENSNGAG00000023900	Arl4a	59	31.933
ENSNGAG00000005838	Rab1a	80	47.619	ENSNGAG00000013169	Rab33a	71	47.619
ENSNGAG00000005838	Rab1a	77	40.373	ENSNGAG00000002744	Rab34	62	40.373
ENSNGAG00000005838	Rab1a	87	32.432	ENSNGAG00000000037	Rerg	90	32.432
ENSNGAG00000005838	Rab1a	95	43.077	ENSNGAG00000010286	Rab5c	89	43.077
ENSNGAG00000005838	Rab1a	82	32.544	ENSNGAG00000023353	Rheb	91	32.544
ENSNGAG00000005838	Rab1a	79	30.247	ENSNGAG00000016204	-	87	30.247
ENSNGAG00000005838	Rab1a	80	35.152	ENSNGAG00000018038	Rab23	69	35.152
ENSNGAG00000005838	Rab1a	75	37.580	ENSNGAG00000012843	Rabl2	65	37.580
ENSNGAG00000005838	Rab1a	86	43.820	ENSNGAG00000000596	Rab39b	84	43.820
ENSNGAG00000005838	Rab1a	83	44.633	ENSNGAG00000015676	Rab42	81	44.633
ENSNGAG00000005838	Rab1a	95	33.803	ENSNGAG00000016512	Rab36	79	33.803
ENSNGAG00000005838	Rab1a	92	48.958	ENSNGAG00000017091	Rab2b	89	48.958
ENSNGAG00000005838	Rab1a	83	43.429	ENSNGAG00000015807	Rab33b	76	43.429
ENSNGAG00000005838	Rab1a	90	48.108	ENSNGAG00000020764	Rab2a	99	45.238
ENSNGAG00000005838	Rab1a	80	38.415	ENSNGAG00000007289	Nras	86	38.415
ENSNGAG00000005838	Rab1a	99	44.554	ENSNGAG00000010962	Rab14	93	44.554
ENSNGAG00000005838	Rab1a	81	46.386	ENSNGAG00000019999	Rab25	78	46.386
ENSNGAG00000005838	Rab1a	57	34.746	ENSNGAG00000007576	Arl8a	61	34.746
ENSNGAG00000005838	Rab1a	90	55.435	ENSNGAG00000010309	Rab13	91	55.435
ENSNGAG00000005838	Rab1a	80	35.928	ENSNGAG00000013556	Mras	80	35.928
ENSNGAG00000005838	Rab1a	100	45.581	ENSNGAG00000015757	Rab11b	99	45.581
ENSNGAG00000005838	Rab1a	68	30.496	ENSNGAG00000024014	Arl3	72	30.496
ENSNGAG00000005838	Rab1a	82	32.749	ENSNGAG00000014397	Eras	71	32.749
ENSNGAG00000005838	Rab1a	82	44.379	ENSNGAG00000019722	-	66	44.379
ENSNGAG00000005838	Rab1a	99	92.079	ENSNGAG00000015910	Rab1b	100	92.079
ENSNGAG00000005838	Rab1a	95	38.144	ENSNGAG00000012652	Rab22a	97	38.144
ENSNGAG00000005838	Rab1a	85	52.299	ENSNGAG00000013726	Rab11a	81	52.299
ENSNGAG00000005838	Rab1a	79	42.236	ENSNGAG00000002623	Rab31	83	42.236
ENSNGAG00000005838	Rab1a	62	33.077	ENSNGAG00000017340	Arl14	65	33.077
ENSNGAG00000005838	Rab1a	70	30.323	ENSNGAG00000022765	Arl4d	77	30.323
ENSNGAG00000005838	Rab1a	57	33.058	ENSNGAG00000019483	Arl2	61	33.058
ENSNGAG00000005838	Rab1a	94	45.361	ENSNGAG00000001465	Rab18	93	45.361
ENSNGAG00000005838	Rab1a	76	39.623	ENSNGAG00000017229	Rab9	79	39.623
ENSNGAG00000005838	Rab1a	78	39.264	ENSNGAG00000005194	Rab7	79	39.264
ENSNGAG00000005838	Rab1a	57	32.203	ENSNGAG00000012594	Arl8b	61	32.203
ENSNGAG00000005838	Rab1a	81	50.602	ENSNGAG00000018930	Rab30	82	50.602
ENSNGAG00000005838	Rab1a	76	39.623	ENSNGAG00000011436	Rab9b	79	39.623
ENSNGAG00000005838	Rab1a	94	36.410	ENSNGAG00000020441	Rab6b	94	36.410
ENSNGAG00000005838	Rab1a	82	50.296	ENSNGAG00000024103	-	72	50.296
ENSNGAG00000005838	Rab1a	84	35.028	ENSNGAG00000022044	Hras	93	35.028
ENSNGAG00000005838	Rab1a	95	43.814	ENSNGAG00000021245	-	90	43.814
ENSNGAG00000005838	Rab1a	57	31.092	ENSNGAG00000012405	Arl4c	61	31.092
ENSNGAG00000005838	Rab1a	80	38.415	ENSNGAG00000000727	Kras	95	36.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000005838	Rab1a	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSNGAG00000005838	Rab1a	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSNGAG00000005838	Rab1a	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSNGAG00000005838	Rab1a	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSNGAG00000005838	Rab1a	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSNGAG00000005838	Rab1a	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSNGAG00000005838	Rab1a	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSNGAG00000005838	Rab1a	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSNGAG00000005838	Rab1a	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSNGAG00000005838	Rab1a	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSNGAG00000005838	Rab1a	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSNGAG00000005838	Rab1a	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSNGAG00000005838	Rab1a	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSNGAG00000005838	Rab1a	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSNGAG00000005838	Rab1a	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSNGAG00000005838	Rab1a	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSNGAG00000005838	Rab1a	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSNGAG00000005838	Rab1a	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSNGAG00000005838	Rab1a	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSNGAG00000005838	Rab1a	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSNGAG00000005838	Rab1a	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000005838	Rab1a	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSNGAG00000005838	Rab1a	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSNGAG00000005838	Rab1a	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSNGAG00000005838	Rab1a	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSNGAG00000005838	Rab1a	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSNGAG00000005838	Rab1a	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSNGAG00000005838	Rab1a	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSNGAG00000005838	Rab1a	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSNGAG00000005838	Rab1a	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSNGAG00000005838	Rab1a	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSNGAG00000005838	Rab1a	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSNGAG00000005838	Rab1a	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSNGAG00000005838	Rab1a	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSNGAG00000005838	Rab1a	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSNGAG00000005838	Rab1a	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSNGAG00000005838	Rab1a	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSNGAG00000005838	Rab1a	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSNGAG00000005838	Rab1a	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSNGAG00000005838	Rab1a	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSNGAG00000005838	Rab1a	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSNGAG00000005838	Rab1a	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSNGAG00000005838	Rab1a	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSNGAG00000005838	Rab1a	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSNGAG00000005838	Rab1a	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSNGAG00000005838	Rab1a	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSNGAG00000005838	Rab1a	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSNGAG00000005838	Rab1a	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSNGAG00000005838	Rab1a	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSNGAG00000005838	Rab1a	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSNGAG00000005838	Rab1a	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSNGAG00000005838	Rab1a	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSNGAG00000005838	Rab1a	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSNGAG00000005838	Rab1a	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSNGAG00000005838	Rab1a	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSNGAG00000005838	Rab1a	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSNGAG00000005838	Rab1a	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSNGAG00000005838	Rab1a	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSNGAG00000005838	Rab1a	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSNGAG00000005838	Rab1a	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSNGAG00000005838	Rab1a	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSNGAG00000005838	Rab1a	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSNGAG00000005838	Rab1a	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSNGAG00000005838	Rab1a	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSNGAG00000005838	Rab1a	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSNGAG00000005838	Rab1a	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSNGAG00000005838	Rab1a	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSNGAG00000005838	Rab1a	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSNGAG00000005838	Rab1a	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSNGAG00000005838	Rab1a	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSNGAG00000005838	Rab1a	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSNGAG00000005838	Rab1a	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSNGAG00000005838	Rab1a	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSNGAG00000005838	Rab1a	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSNGAG00000005838	Rab1a	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSNGAG00000005838	Rab1a	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSNGAG00000005838	Rab1a	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSNGAG00000005838	Rab1a	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSNGAG00000005838	Rab1a	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSNGAG00000005838	Rab1a	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSNGAG00000005838	Rab1a	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSNGAG00000005838	Rab1a	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSNGAG00000005838	Rab1a	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSNGAG00000005838	Rab1a	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSNGAG00000005838	Rab1a	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSNGAG00000005838	Rab1a	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSNGAG00000005838	Rab1a	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSNGAG00000005838	Rab1a	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSNGAG00000005838	Rab1a	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSNGAG00000005838	Rab1a	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSNGAG00000005838	Rab1a	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSNGAG00000005838	Rab1a	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSNGAG00000005838	Rab1a	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSNGAG00000005838	Rab1a	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSNGAG00000005838	Rab1a	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSNGAG00000005838	Rab1a	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSNGAG00000005838	Rab1a	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSNGAG00000005838	Rab1a	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSNGAG00000005838	Rab1a	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSNGAG00000005838	Rab1a	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus