EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000006165 (Gene tree)
Gene ID: 103736636
Gene Symbol: Clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 11160 bases
Position: chrKL201330.1:1933731-1944890
Accession: 103736636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004581	Clp1	PF06807.14	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000007507	-	3598	XM_008836152	ENSNGAP00000004581	425 (aa)	XP_008834374	-

Gene Model

Click here to download ENSNGAG00000006165's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000006165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000006165	Clp1	100	99.294	ENSG00000172409	CLP1	100	99.294	Homo_sapiens
ENSNGAG00000006165	Clp1	98	76.415	ENSAPOG00000008242	clp1	96	76.415	Acanthochromis_polyacanthus
ENSNGAG00000006165	Clp1	100	99.765	ENSAMEG00000014551	CLP1	98	99.765	Ailuropoda_melanoleuca
ENSNGAG00000006165	Clp1	98	75.708	ENSACIG00000006310	clp1	95	75.708	Amphilophus_citrinellus
ENSNGAG00000006165	Clp1	100	75.058	ENSAOCG00000010681	clp1	100	75.058	Amphiprion_ocellaris
ENSNGAG00000006165	Clp1	98	76.415	ENSAPEG00000012165	clp1	99	76.415	Amphiprion_percula
ENSNGAG00000006165	Clp1	99	75.870	ENSATEG00000012374	clp1	98	75.870	Anabas_testudineus
ENSNGAG00000006165	Clp1	100	93.647	ENSACAG00000007139	CLP1	100	93.647	Anolis_carolinensis
ENSNGAG00000006165	Clp1	100	99.294	ENSANAG00000034935	CLP1	100	99.294	Aotus_nancymaae
ENSNGAG00000006165	Clp1	99	74.942	ENSACLG00000013573	clp1	98	74.942	Astatotilapia_calliptera
ENSNGAG00000006165	Clp1	97	78.622	ENSAMXG00000014194	clp1	98	78.622	Astyanax_mexicanus
ENSNGAG00000006165	Clp1	100	99.765	ENSBTAG00000006493	CLP1	100	99.765	Bos_taurus
ENSNGAG00000006165	Clp1	96	48.201	WBGene00010304	clpf-1	97	48.201	Caenorhabditis_elegans
ENSNGAG00000006165	Clp1	100	99.294	ENSCJAG00000008748	CLP1	100	99.294	Callithrix_jacchus
ENSNGAG00000006165	Clp1	100	99.765	ENSCAFG00000007815	CLP1	100	99.765	Canis_familiaris
ENSNGAG00000006165	Clp1	100	99.765	ENSCAFG00020000903	CLP1	100	99.765	Canis_lupus_dingo
ENSNGAG00000006165	Clp1	100	99.059	ENSCHIG00000023497	CLP1	100	99.059	Capra_hircus
ENSNGAG00000006165	Clp1	100	99.294	ENSTSYG00000006824	CLP1	99	99.294	Carlito_syrichta
ENSNGAG00000006165	Clp1	100	99.059	ENSCAPG00000009703	CLP1	100	99.059	Cavia_aperea
ENSNGAG00000006165	Clp1	98	99.279	ENSCPOG00000012554	CLP1	99	99.279	Cavia_porcellus
ENSNGAG00000006165	Clp1	100	99.294	ENSCCAG00000031957	CLP1	100	99.294	Cebus_capucinus
ENSNGAG00000006165	Clp1	100	99.294	ENSCATG00000044628	CLP1	100	99.294	Cercocebus_atys
ENSNGAG00000006165	Clp1	100	99.529	ENSCLAG00000004094	CLP1	100	99.529	Chinchilla_lanigera
ENSNGAG00000006165	Clp1	100	99.294	ENSCSAG00000005994	CLP1	100	99.294	Chlorocebus_sabaeus
ENSNGAG00000006165	Clp1	100	94.118	ENSCPBG00000016843	CLP1	100	94.118	Chrysemys_picta_bellii
ENSNGAG00000006165	Clp1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSNGAG00000006165	Clp1	99	63.033	ENSCSAVG00000003437	-	99	63.033	Ciona_savignyi
ENSNGAG00000006165	Clp1	100	99.294	ENSCANG00000034335	CLP1	100	99.294	Colobus_angolensis_palliatus
ENSNGAG00000006165	Clp1	100	99.059	ENSCGRG00001002227	CLP1	100	99.059	Cricetulus_griseus_chok1gshd
ENSNGAG00000006165	Clp1	100	99.059	ENSCGRG00000004328	CLP1	100	99.059	Cricetulus_griseus_crigri
ENSNGAG00000006165	Clp1	99	74.246	ENSCSEG00000008614	clp1	98	74.246	Cynoglossus_semilaevis
ENSNGAG00000006165	Clp1	99	75.406	ENSCVAG00000020101	clp1	98	75.406	Cyprinodon_variegatus
ENSNGAG00000006165	Clp1	97	79.475	ENSDARG00000063663	clp1	95	79.475	Danio_rerio
ENSNGAG00000006165	Clp1	99	99.292	ENSDNOG00000042415	CLP1	90	99.292	Dasypus_novemcinctus
ENSNGAG00000006165	Clp1	100	99.294	ENSDORG00000014685	Clp1	100	99.294	Dipodomys_ordii
ENSNGAG00000006165	Clp1	96	56.553	FBgn0033842	cbc	97	56.553	Drosophila_melanogaster
ENSNGAG00000006165	Clp1	100	99.529	ENSETEG00000003009	CLP1	100	99.529	Echinops_telfairi
ENSNGAG00000006165	Clp1	97	72.155	ENSEBUG00000011648	clp1	97	72.155	Eptatretus_burgeri
ENSNGAG00000006165	Clp1	100	99.059	ENSEASG00005002093	CLP1	100	99.059	Equus_asinus_asinus
ENSNGAG00000006165	Clp1	100	99.059	ENSECAG00000011597	CLP1	100	99.059	Equus_caballus
ENSNGAG00000006165	Clp1	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSNGAG00000006165	Clp1	97	79.097	ENSELUG00000024048	clp1	95	79.097	Esox_lucius
ENSNGAG00000006165	Clp1	100	99.529	ENSFCAG00000006633	CLP1	100	99.529	Felis_catus
ENSNGAG00000006165	Clp1	100	92.000	ENSFALG00000011145	CLP1	100	92.000	Ficedula_albicollis
ENSNGAG00000006165	Clp1	100	99.529	ENSFDAG00000000234	CLP1	100	99.529	Fukomys_damarensis
ENSNGAG00000006165	Clp1	99	74.710	ENSFHEG00000014760	CLP1	98	74.710	Fundulus_heteroclitus
ENSNGAG00000006165	Clp1	97	79.426	ENSGMOG00000019340	clp1	95	79.426	Gadus_morhua
ENSNGAG00000006165	Clp1	100	92.706	ENSGALG00000007370	CLP1	100	92.706	Gallus_gallus
ENSNGAG00000006165	Clp1	99	75.174	ENSGAFG00000003020	clp1	99	75.174	Gambusia_affinis
ENSNGAG00000006165	Clp1	99	76.334	ENSGACG00000017832	clp1	98	76.334	Gasterosteus_aculeatus
ENSNGAG00000006165	Clp1	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
ENSNGAG00000006165	Clp1	100	99.294	ENSGGOG00000023006	CLP1	100	99.294	Gorilla_gorilla
ENSNGAG00000006165	Clp1	99	74.942	ENSHBUG00000010436	clp1	98	74.942	Haplochromis_burtoni
ENSNGAG00000006165	Clp1	100	99.529	ENSHGLG00000009914	CLP1	100	99.529	Heterocephalus_glaber_female
ENSNGAG00000006165	Clp1	100	99.529	ENSHGLG00100006105	CLP1	100	99.529	Heterocephalus_glaber_male
ENSNGAG00000006165	Clp1	99	76.322	ENSHCOG00000010072	clp1	99	76.322	Hippocampus_comes
ENSNGAG00000006165	Clp1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
ENSNGAG00000006165	Clp1	100	99.529	ENSSTOG00000029257	CLP1	100	99.529	Ictidomys_tridecemlineatus
ENSNGAG00000006165	Clp1	100	99.059	ENSJJAG00000023691	Clp1	100	99.059	Jaculus_jaculus
ENSNGAG00000006165	Clp1	99	74.710	ENSKMAG00000011990	clp1	98	74.710	Kryptolebias_marmoratus
ENSNGAG00000006165	Clp1	99	76.102	ENSLBEG00000010201	clp1	98	76.102	Labrus_bergylta
ENSNGAG00000006165	Clp1	100	85.176	ENSLACG00000003160	CLP1	100	85.176	Latimeria_chalumnae
ENSNGAG00000006165	Clp1	73	76.398	ENSLOCG00000008074	clp1	100	77.329	Lepisosteus_oculatus
ENSNGAG00000006165	Clp1	100	99.294	ENSLAFG00000014907	CLP1	100	99.294	Loxodonta_africana
ENSNGAG00000006165	Clp1	100	99.294	ENSMFAG00000046074	CLP1	100	99.294	Macaca_fascicularis
ENSNGAG00000006165	Clp1	100	99.294	ENSMMUG00000038007	CLP1	99	99.294	Macaca_mulatta
ENSNGAG00000006165	Clp1	100	99.294	ENSMNEG00000000259	CLP1	100	99.294	Macaca_nemestrina
ENSNGAG00000006165	Clp1	100	99.294	ENSMLEG00000043556	CLP1	100	99.294	Mandrillus_leucophaeus
ENSNGAG00000006165	Clp1	100	75.289	ENSMAMG00000002149	clp1	98	75.289	Mastacembelus_armatus
ENSNGAG00000006165	Clp1	99	74.942	ENSMZEG00005002850	clp1	98	74.942	Maylandia_zebra
ENSNGAG00000006165	Clp1	100	92.706	ENSMGAG00000009643	CLP1	100	92.706	Meleagris_gallopavo
ENSNGAG00000006165	Clp1	100	98.353	ENSMAUG00000016261	Clp1	100	98.353	Mesocricetus_auratus
ENSNGAG00000006165	Clp1	100	99.765	ENSMICG00000004895	CLP1	100	99.765	Microcebus_murinus
ENSNGAG00000006165	Clp1	100	99.294	ENSMOCG00000005498	Clp1	100	99.294	Microtus_ochrogaster
ENSNGAG00000006165	Clp1	98	77.830	ENSMMOG00000003229	clp1	96	77.830	Mola_mola
ENSNGAG00000006165	Clp1	100	97.647	ENSMODG00000020107	-	100	97.647	Monodelphis_domestica
ENSNGAG00000006165	Clp1	100	97.647	ENSMODG00000024148	-	100	97.647	Monodelphis_domestica
ENSNGAG00000006165	Clp1	99	74.713	ENSMALG00000014239	clp1	99	74.713	Monopterus_albus
ENSNGAG00000006165	Clp1	100	98.824	MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	Mus_caroli
ENSNGAG00000006165	Clp1	100	98.824	ENSMUSG00000027079	Clp1	100	98.824	Mus_musculus
ENSNGAG00000006165	Clp1	100	98.588	MGP_PahariEiJ_G0025177	Clp1	100	98.588	Mus_pahari
ENSNGAG00000006165	Clp1	100	98.824	MGP_SPRETEiJ_G0024646	Clp1	100	98.824	Mus_spretus
ENSNGAG00000006165	Clp1	100	99.765	ENSMPUG00000000268	CLP1	100	99.765	Mustela_putorius_furo
ENSNGAG00000006165	Clp1	100	98.824	ENSMLUG00000007904	CLP1	100	98.824	Myotis_lucifugus
ENSNGAG00000006165	Clp1	99	74.942	ENSNBRG00000005225	clp1	98	74.942	Neolamprologus_brichardi
ENSNGAG00000006165	Clp1	82	95.960	ENSNLEG00000012809	-	100	95.960	Nomascus_leucogenys
ENSNGAG00000006165	Clp1	100	97.647	ENSMEUG00000010949	CLP1	99	97.647	Notamacropus_eugenii
ENSNGAG00000006165	Clp1	70	98.993	ENSOPRG00000007329	CLP1	100	98.993	Ochotona_princeps
ENSNGAG00000006165	Clp1	100	99.529	ENSODEG00000011410	CLP1	100	99.529	Octodon_degus
ENSNGAG00000006165	Clp1	99	74.710	ENSONIG00000005089	clp1	98	74.710	Oreochromis_niloticus
ENSNGAG00000006165	Clp1	100	99.294	ENSOCUG00000007045	CLP1	100	99.294	Oryctolagus_cuniculus
ENSNGAG00000006165	Clp1	99	74.246	ENSORLG00000003647	clp1	98	74.246	Oryzias_latipes
ENSNGAG00000006165	Clp1	99	74.014	ENSORLG00020016676	clp1	98	74.014	Oryzias_latipes_hni
ENSNGAG00000006165	Clp1	99	74.246	ENSORLG00015019484	clp1	98	74.246	Oryzias_latipes_hsok
ENSNGAG00000006165	Clp1	99	74.710	ENSOMEG00000021303	clp1	98	74.710	Oryzias_melastigma
ENSNGAG00000006165	Clp1	100	99.529	ENSOGAG00000004508	CLP1	100	99.529	Otolemur_garnettii
ENSNGAG00000006165	Clp1	100	98.118	ENSOARG00000010145	CLP1	98	98.118	Ovis_aries
ENSNGAG00000006165	Clp1	100	99.294	ENSPPAG00000041519	CLP1	100	99.294	Pan_paniscus
ENSNGAG00000006165	Clp1	100	99.529	ENSPPRG00000006135	CLP1	100	99.529	Panthera_pardus
ENSNGAG00000006165	Clp1	100	99.529	ENSPTIG00000015866	CLP1	100	99.529	Panthera_tigris_altaica
ENSNGAG00000006165	Clp1	100	99.294	ENSPTRG00000047318	CLP1	100	99.294	Pan_troglodytes
ENSNGAG00000006165	Clp1	100	99.294	ENSPANG00000017078	CLP1	97	99.294	Papio_anubis
ENSNGAG00000006165	Clp1	97	80.145	ENSPKIG00000007697	clp1	94	80.145	Paramormyrops_kingsleyae
ENSNGAG00000006165	Clp1	95	91.542	ENSPSIG00000005468	CLP1	100	91.542	Pelodiscus_sinensis
ENSNGAG00000006165	Clp1	99	76.037	ENSPMGG00000012171	clp1	99	76.037	Periophthalmus_magnuspinnatus
ENSNGAG00000006165	Clp1	100	99.294	ENSPEMG00000011213	-	100	99.294	Peromyscus_maniculatus_bairdii
ENSNGAG00000006165	Clp1	100	75.822	ENSPMAG00000006707	clp1	100	75.822	Petromyzon_marinus
ENSNGAG00000006165	Clp1	100	97.176	ENSPCIG00000011899	CLP1	99	97.176	Phascolarctos_cinereus
ENSNGAG00000006165	Clp1	99	74.710	ENSPFOG00000008169	clp1	98	74.710	Poecilia_formosa
ENSNGAG00000006165	Clp1	99	74.710	ENSPLAG00000022388	clp1	99	74.710	Poecilia_latipinna
ENSNGAG00000006165	Clp1	99	74.710	ENSPMEG00000021088	clp1	99	74.710	Poecilia_mexicana
ENSNGAG00000006165	Clp1	99	74.942	ENSPREG00000017802	clp1	98	74.942	Poecilia_reticulata
ENSNGAG00000006165	Clp1	53	99.107	ENSPPYG00000003266	-	100	99.107	Pongo_abelii
ENSNGAG00000006165	Clp1	100	99.765	ENSPCOG00000000360	CLP1	98	99.765	Propithecus_coquereli
ENSNGAG00000006165	Clp1	100	99.765	ENSPVAG00000016270	CLP1	100	99.765	Pteropus_vampyrus
ENSNGAG00000006165	Clp1	99	74.942	ENSPNYG00000017274	clp1	97	74.942	Pundamilia_nyererei
ENSNGAG00000006165	Clp1	97	80.000	ENSPNAG00000026460	clp1	95	80.048	Pygocentrus_nattereri
ENSNGAG00000006165	Clp1	100	98.824	ENSRNOG00000007416	Clp1	100	98.824	Rattus_norvegicus
ENSNGAG00000006165	Clp1	100	99.294	ENSRBIG00000018191	CLP1	100	99.294	Rhinopithecus_bieti
ENSNGAG00000006165	Clp1	100	99.294	ENSRROG00000039265	CLP1	100	99.294	Rhinopithecus_roxellana
ENSNGAG00000006165	Clp1	100	99.294	ENSSBOG00000032517	-	100	99.294	Saimiri_boliviensis_boliviensis
ENSNGAG00000006165	Clp1	96	79.064	ENSSBOG00000010558	-	93	79.064	Saimiri_boliviensis_boliviensis
ENSNGAG00000006165	Clp1	100	97.882	ENSSHAG00000015695	CLP1	100	97.882	Sarcophilus_harrisii
ENSNGAG00000006165	Clp1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSNGAG00000006165	Clp1	99	74.942	ENSSMAG00000019423	clp1	97	74.942	Scophthalmus_maximus
ENSNGAG00000006165	Clp1	98	77.123	ENSSDUG00000014495	clp1	96	77.123	Seriola_dumerili
ENSNGAG00000006165	Clp1	98	76.887	ENSSLDG00000000937	clp1	96	76.887	Seriola_lalandi_dorsalis
ENSNGAG00000006165	Clp1	52	98.655	ENSSARG00000002459	CLP1	100	98.655	Sorex_araneus
ENSNGAG00000006165	Clp1	100	92.941	ENSSPUG00000016811	CLP1	100	92.941	Sphenodon_punctatus
ENSNGAG00000006165	Clp1	98	75.943	ENSSPAG00000016052	clp1	96	75.943	Stegastes_partitus
ENSNGAG00000006165	Clp1	100	99.765	ENSSSCG00000031442	CLP1	100	99.765	Sus_scrofa
ENSNGAG00000006165	Clp1	100	91.765	ENSTGUG00000007002	CLP1	100	91.765	Taeniopygia_guttata
ENSNGAG00000006165	Clp1	99	76.347	ENSTRUG00000012602	clp1	98	76.347	Takifugu_rubripes
ENSNGAG00000006165	Clp1	99	75.878	ENSTNIG00000013125	clp1	98	75.878	Tetraodon_nigroviridis
ENSNGAG00000006165	Clp1	100	98.588	ENSTBEG00000009975	CLP1	100	98.588	Tupaia_belangeri
ENSNGAG00000006165	Clp1	100	99.294	ENSTTRG00000002096	CLP1	100	99.294	Tursiops_truncatus
ENSNGAG00000006165	Clp1	100	99.765	ENSUAMG00000011388	CLP1	100	99.765	Ursus_americanus
ENSNGAG00000006165	Clp1	100	99.765	ENSUMAG00000018317	CLP1	100	99.765	Ursus_maritimus
ENSNGAG00000006165	Clp1	100	99.765	ENSVVUG00000017138	CLP1	97	99.765	Vulpes_vulpes
ENSNGAG00000006165	Clp1	98	77.458	ENSXETG00000007088	clp1	95	78.177	Xenopus_tropicalis
ENSNGAG00000006165	Clp1	99	74.942	ENSXCOG00000002287	clp1	98	74.942	Xiphophorus_couchianus
ENSNGAG00000006165	Clp1	99	74.942	ENSXMAG00000009783	clp1	98	74.942	Xiphophorus_maculatus