EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000006480 (Gene tree)
Gene ID: 103744566
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 41330 bases
Position: chrKL203089.1:2080389-2121718
Accession: 103744566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000004815	RRM_1	PF00076.22	4e-56	1	3
ENSNGAP00000004815	RRM_1	PF00076.22	4e-56	2	3
ENSNGAP00000004815	RRM_1	PF00076.22	4e-56	3	3
ENSNGAP00000004810	RRM_1	PF00076.22	4.7e-56	1	3
ENSNGAP00000004810	RRM_1	PF00076.22	4.7e-56	2	3
ENSNGAP00000004810	RRM_1	PF00076.22	4.7e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000008060	-	2196	-	ENSNGAP00000004815	731 (aa)	-	-
ENSNGAT00000008047	-	2211	XM_008846391	ENSNGAP00000004810	736 (aa)	XP_008844613	-

Gene Model

Click here to download ENSNGAG00000006480's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000006480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000006480	-	100	92.123	ENSNGAG00000017946	-	100	91.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000006480	-	81	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSNGAG00000006480	-	57	52.834	ENSAPOG00000015512	rbm28	100	50.968	Acanthochromis_polyacanthus
ENSNGAG00000006480	-	100	92.391	ENSAMEG00000004776	RBM28	92	92.391	Ailuropoda_melanoleuca
ENSNGAG00000006480	-	57	53.461	ENSACIG00000023153	rbm28	100	48.729	Amphilophus_citrinellus
ENSNGAG00000006480	-	58	52.495	ENSAOCG00000000462	rbm28	100	51.804	Amphiprion_ocellaris
ENSNGAG00000006480	-	58	52.193	ENSAPEG00000012996	rbm28	100	51.625	Amphiprion_percula
ENSNGAG00000006480	-	59	51.282	ENSATEG00000001672	rbm28	100	48.843	Anabas_testudineus
ENSNGAG00000006480	-	100	81.457	ENSANAG00000033922	RBM28	100	100.000	Aotus_nancymaae
ENSNGAG00000006480	-	100	50.065	ENSACLG00000025024	rbm28	100	50.958	Astatotilapia_calliptera
ENSNGAG00000006480	-	59	58.756	ENSAMXG00000000763	rbm28	99	58.756	Astyanax_mexicanus
ENSNGAG00000006480	-	81	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSNGAG00000006480	-	81	100.000	ENSCJAG00000017731	RBM28	100	100.000	Callithrix_jacchus
ENSNGAG00000006480	-	100	79.361	ENSCAFG00000001667	RBM28	100	79.920	Canis_familiaris
ENSNGAG00000006480	-	100	79.361	ENSCAFG00020021648	RBM28	100	79.920	Canis_lupus_dingo
ENSNGAG00000006480	-	100	78.884	ENSCHIG00000014146	RBM28	100	79.283	Capra_hircus
ENSNGAG00000006480	-	100	78.927	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSNGAG00000006480	-	83	60.813	ENSCAPG00000013218	RBM28	99	60.813	Cavia_aperea
ENSNGAG00000006480	-	100	80.739	ENSCPOG00000006253	RBM28	100	80.607	Cavia_porcellus
ENSNGAG00000006480	-	81	100.000	ENSCCAG00000035105	RBM28	100	100.000	Cebus_capucinus
ENSNGAG00000006480	-	100	80.577	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSNGAG00000006480	-	100	78.088	ENSCLAG00000003707	RBM28	100	78.088	Chinchilla_lanigera
ENSNGAG00000006480	-	100	80.501	ENSCSAG00000010161	RBM28	100	81.028	Chlorocebus_sabaeus
ENSNGAG00000006480	-	58	88.710	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSNGAG00000006480	-	54	58.628	ENSCPBG00000018088	RBM28	87	57.143	Chrysemys_picta_bellii
ENSNGAG00000006480	-	90	81.749	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSNGAG00000006480	-	67	83.501	ENSCGRG00001021278	Rbm28	100	79.923	Cricetulus_griseus_chok1gshd
ENSNGAG00000006480	-	100	81.651	ENSCGRG00000005098	Rbm28	100	81.651	Cricetulus_griseus_crigri
ENSNGAG00000006480	-	100	51.643	ENSCSEG00000004212	rbm28	100	50.854	Cynoglossus_semilaevis
ENSNGAG00000006480	-	100	48.182	ENSDARG00000025332	rbm28	100	49.309	Danio_rerio
ENSNGAG00000006480	-	100	78.609	ENSDNOG00000001124	RBM28	100	80.079	Dasypus_novemcinctus
ENSNGAG00000006480	-	66	79.234	ENSDORG00000004184	Rbm28	97	79.032	Dipodomys_ordii
ENSNGAG00000006480	-	88	35.799	FBgn0260456	CG4806	92	35.945	Drosophila_melanogaster
ENSNGAG00000006480	-	100	69.108	ENSETEG00000007130	RBM28	99	69.312	Echinops_telfairi
ENSNGAG00000006480	-	84	47.120	ENSEBUG00000004419	rbm28	98	41.192	Eptatretus_burgeri
ENSNGAG00000006480	-	100	79.922	ENSEASG00005008528	RBM28	100	80.183	Equus_asinus_asinus
ENSNGAG00000006480	-	100	79.454	ENSECAG00000007745	RBM28	100	80.078	Equus_caballus
ENSNGAG00000006480	-	100	71.166	ENSEEUG00000002389	RBM28	100	71.916	Erinaceus_europaeus
ENSNGAG00000006480	-	100	52.302	ENSELUG00000020602	rbm28	100	51.918	Esox_lucius
ENSNGAG00000006480	-	81	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSNGAG00000006480	-	100	81.649	ENSFDAG00000010169	RBM28	100	81.926	Fukomys_damarensis
ENSNGAG00000006480	-	89	52.304	ENSGMOG00000007091	rbm28	99	47.530	Gadus_morhua
ENSNGAG00000006480	-	59	54.607	ENSGAFG00000004802	rbm28	97	54.933	Gambusia_affinis
ENSNGAG00000006480	-	59	55.889	ENSGACG00000012612	rbm28	100	51.673	Gasterosteus_aculeatus
ENSNGAG00000006480	-	84	71.859	ENSGAGG00000008873	RBM28	87	76.923	Gopherus_agassizii
ENSNGAG00000006480	-	95	79.473	ENSGGOG00000004644	RBM28	97	80.305	Gorilla_gorilla
ENSNGAG00000006480	-	92	50.421	ENSHBUG00000009611	rbm28	99	50.882	Haplochromis_burtoni
ENSNGAG00000006480	-	100	82.024	ENSHGLG00000005409	RBM28	100	81.891	Heterocephalus_glaber_female
ENSNGAG00000006480	-	100	82.024	ENSHGLG00100016458	RBM28	100	81.891	Heterocephalus_glaber_male
ENSNGAG00000006480	-	83	48.438	ENSHCOG00000010597	rbm28	99	42.559	Hippocampus_comes
ENSNGAG00000006480	-	57	49.524	ENSIPUG00000007103	rbm28	93	47.198	Ictalurus_punctatus
ENSNGAG00000006480	-	100	81.332	ENSSTOG00000002169	RBM28	100	81.854	Ictidomys_tridecemlineatus
ENSNGAG00000006480	-	100	76.510	ENSJJAG00000022400	Rbm28	100	77.315	Jaculus_jaculus
ENSNGAG00000006480	-	99	48.966	ENSKMAG00000013348	rbm28	99	50.195	Kryptolebias_marmoratus
ENSNGAG00000006480	-	58	52.993	ENSLBEG00000012998	rbm28	100	48.564	Labrus_bergylta
ENSNGAG00000006480	-	75	56.491	ENSLACG00000010485	-	100	57.041	Latimeria_chalumnae
ENSNGAG00000006480	-	100	63.077	ENSLOCG00000015541	rbm28	84	62.371	Lepisosteus_oculatus
ENSNGAG00000006480	-	100	77.116	ENSLAFG00000010717	RBM28	100	77.513	Loxodonta_africana
ENSNGAG00000006480	-	100	80.446	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSNGAG00000006480	-	100	80.603	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSNGAG00000006480	-	100	80.053	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSNGAG00000006480	-	97	80.426	ENSMLEG00000037717	RBM28	100	80.851	Mandrillus_leucophaeus
ENSNGAG00000006480	-	100	52.294	ENSMAMG00000008525	rbm28	100	52.042	Mastacembelus_armatus
ENSNGAG00000006480	-	93	49.030	ENSMZEG00005019625	rbm28	100	50.274	Maylandia_zebra
ENSNGAG00000006480	-	100	78.278	ENSMAUG00000002263	Rbm28	100	78.278	Mesocricetus_auratus
ENSNGAG00000006480	-	93	76.870	ENSMICG00000000107	RBM28	100	76.870	Microcebus_murinus
ENSNGAG00000006480	-	100	81.142	ENSMOCG00000014615	Rbm28	100	81.830	Microtus_ochrogaster
ENSNGAG00000006480	-	59	53.349	ENSMMOG00000008600	rbm28	100	51.050	Mola_mola
ENSNGAG00000006480	-	100	67.360	ENSMODG00000015151	RBM28	100	69.241	Monodelphis_domestica
ENSNGAG00000006480	-	59	53.333	ENSMALG00000006419	rbm28	100	48.909	Monopterus_albus
ENSNGAG00000006480	-	100	82.361	MGP_CAROLIEiJ_G0028162	Rbm28	100	82.095	Mus_caroli
ENSNGAG00000006480	-	100	81.963	ENSMUSG00000029701	Rbm28	100	81.830	Mus_musculus
ENSNGAG00000006480	-	100	82.891	MGP_PahariEiJ_G0021920	Rbm28	100	82.891	Mus_pahari
ENSNGAG00000006480	-	100	82.361	MGP_SPRETEiJ_G0029162	Rbm28	100	82.228	Mus_spretus
ENSNGAG00000006480	-	100	77.836	ENSMPUG00000006511	RBM28	100	78.732	Mustela_putorius_furo
ENSNGAG00000006480	-	100	78.096	ENSMLUG00000002186	RBM28	100	79.790	Myotis_lucifugus
ENSNGAG00000006480	-	81	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSNGAG00000006480	-	83	83.333	ENSMEUG00000009611	RBM28	91	83.333	Notamacropus_eugenii
ENSNGAG00000006480	-	90	74.566	ENSOPRG00000015140	RBM28	90	74.423	Ochotona_princeps
ENSNGAG00000006480	-	100	76.596	ENSODEG00000003213	-	100	77.261	Octodon_degus
ENSNGAG00000006480	-	78	82.412	ENSODEG00000013217	-	83	84.184	Octodon_degus
ENSNGAG00000006480	-	59	54.705	ENSONIG00000014924	rbm28	100	50.000	Oreochromis_niloticus
ENSNGAG00000006480	-	100	62.272	ENSOANG00000000815	-	100	63.373	Ornithorhynchus_anatinus
ENSNGAG00000006480	-	100	77.836	ENSOCUG00000003009	RBM28	100	77.966	Oryctolagus_cuniculus
ENSNGAG00000006480	-	99	50.387	ENSORLG00000009636	rbm28	99	50.727	Oryzias_latipes
ENSNGAG00000006480	-	59	55.079	ENSORLG00020002123	rbm28	99	51.067	Oryzias_latipes_hni
ENSNGAG00000006480	-	87	61.244	ENSORLG00015015030	rbm28	97	59.903	Oryzias_latipes_hsok
ENSNGAG00000006480	-	59	56.332	ENSOMEG00000007801	rbm28	100	51.886	Oryzias_melastigma
ENSNGAG00000006480	-	81	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSNGAG00000006480	-	100	78.989	ENSOARG00000002547	RBM28	100	78.704	Ovis_aries
ENSNGAG00000006480	-	81	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSNGAG00000006480	-	81	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSNGAG00000006480	-	81	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSNGAG00000006480	-	81	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSNGAG00000006480	-	100	80.603	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSNGAG00000006480	-	99	51.588	ENSPKIG00000023453	rbm28	99	51.580	Paramormyrops_kingsleyae
ENSNGAG00000006480	-	100	48.985	ENSPMGG00000012840	rbm28	100	49.317	Periophthalmus_magnuspinnatus
ENSNGAG00000006480	-	100	81.536	ENSPEMG00000020673	Rbm28	100	81.806	Peromyscus_maniculatus_bairdii
ENSNGAG00000006480	-	100	69.210	ENSPCIG00000012810	RBM28	100	70.400	Phascolarctos_cinereus
ENSNGAG00000006480	-	59	54.933	ENSPFOG00000018209	rbm28	100	48.961	Poecilia_formosa
ENSNGAG00000006480	-	58	54.566	ENSPLAG00000016078	rbm28	96	48.681	Poecilia_latipinna
ENSNGAG00000006480	-	59	55.257	ENSPMEG00000004292	rbm28	100	49.157	Poecilia_mexicana
ENSNGAG00000006480	-	58	54.730	ENSPREG00000014287	rbm28	99	49.215	Poecilia_reticulata
ENSNGAG00000006480	-	100	81.028	ENSPPYG00000017975	RBM28	100	81.950	Pongo_abelii
ENSNGAG00000006480	-	76	72.676	ENSPCAG00000008223	RBM28	82	72.702	Procavia_capensis
ENSNGAG00000006480	-	81	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSNGAG00000006480	-	79	91.176	ENSPVAG00000005443	RBM28	76	91.176	Pteropus_vampyrus
ENSNGAG00000006480	-	100	50.064	ENSPNYG00000014003	rbm28	100	50.702	Pundamilia_nyererei
ENSNGAG00000006480	-	100	78.278	ENSRNOG00000005468	Rbm28	100	79.338	Rattus_norvegicus
ENSNGAG00000006480	-	81	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSNGAG00000006480	-	81	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSNGAG00000006480	-	90	75.916	ENSSBOG00000012308	RBM28	100	76.178	Saimiri_boliviensis_boliviensis
ENSNGAG00000006480	-	96	65.503	ENSSHAG00000017017	RBM28	99	65.181	Sarcophilus_harrisii
ENSNGAG00000006480	-	57	58.548	ENSSFOG00015001231	rbm28	100	52.815	Scleropages_formosus
ENSNGAG00000006480	-	69	46.838	ENSSMAG00000003885	rbm28	98	50.420	Scophthalmus_maximus
ENSNGAG00000006480	-	62	52.917	ENSSDUG00000014270	rbm28	97	53.800	Seriola_dumerili
ENSNGAG00000006480	-	59	55.556	ENSSLDG00000020099	rbm28	100	49.616	Seriola_lalandi_dorsalis
ENSNGAG00000006480	-	78	84.444	ENSSARG00000008303	RBM28	80	84.444	Sorex_araneus
ENSNGAG00000006480	-	68	69.118	ENSSPUG00000000838	RBM28	79	69.118	Sphenodon_punctatus
ENSNGAG00000006480	-	59	54.036	ENSSPAG00000023305	rbm28	100	47.908	Stegastes_partitus
ENSNGAG00000006480	-	100	79.470	ENSSSCG00000031847	RBM28	100	79.735	Sus_scrofa
ENSNGAG00000006480	-	99	49.166	ENSTNIG00000017962	rbm28	99	49.037	Tetraodon_nigroviridis
ENSNGAG00000006480	-	86	84.024	ENSTBEG00000012749	RBM28	85	84.024	Tupaia_belangeri
ENSNGAG00000006480	-	100	75.526	ENSTTRG00000013647	RBM28	100	74.802	Tursiops_truncatus
ENSNGAG00000006480	-	100	72.596	ENSUAMG00000006949	RBM28	100	73.254	Ursus_americanus
ENSNGAG00000006480	-	100	79.365	ENSUMAG00000005997	RBM28	100	79.762	Ursus_maritimus
ENSNGAG00000006480	-	87	71.494	ENSVPAG00000008304	RBM28	87	70.973	Vicugna_pacos
ENSNGAG00000006480	-	100	79.095	ENSVVUG00000007270	RBM28	100	79.654	Vulpes_vulpes
ENSNGAG00000006480	-	99	53.173	ENSXETG00000009271	rbm28	99	53.671	Xenopus_tropicalis
ENSNGAG00000006480	-	59	52.968	ENSXCOG00000020357	rbm28	99	50.210	Xiphophorus_couchianus
ENSNGAG00000006480	-	58	53.288	ENSXMAG00000004415	rbm28	99	48.761	Xiphophorus_maculatus