EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000007930 (Gene tree)
Gene ID: 103746518
Gene Symbol: Pan2
Alias: 1200014O24Rik|Usp52
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 18788 bases
Position: chrKL203643.1:444498-463285
Accession: 103746518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000005581	RNase_T	PF00929.24	2e-19	1	1
ENSNGAP00000005575	RNase_T	PF00929.24	2.1e-19	1	1
ENSNGAP00000005584	RNase_T	PF00929.24	2.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000009629	-	3615	-	ENSNGAP00000005575	1204 (aa)	-	-
ENSNGAT00000009636	-	3606	XM_008848727	ENSNGAP00000005581	1201 (aa)	XP_008846949	-
ENSNGAT00000009642	-	3678	XM_017802082	ENSNGAP00000005584	1225 (aa)	XP_017657571	-

Gene Model

Click here to download ENSNGAG00000007930's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000007930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000007930	Pan2	100	75.369	ENSAPOG00000022955	pan2	100	74.917	Acanthochromis_polyacanthus
ENSNGAG00000007930	Pan2	100	96.922	ENSAMEG00000003824	PAN2	100	96.922	Ailuropoda_melanoleuca
ENSNGAG00000007930	Pan2	99	60.873	ENSACIG00000012858	PAN2	99	60.807	Amphilophus_citrinellus
ENSNGAG00000007930	Pan2	93	82.920	ENSACIG00000013079	pan2	99	83.889	Amphilophus_citrinellus
ENSNGAG00000007930	Pan2	100	75.288	ENSAOCG00000022334	pan2	99	75.288	Amphiprion_ocellaris
ENSNGAG00000007930	Pan2	100	75.267	ENSAPEG00000022760	pan2	99	75.267	Amphiprion_percula
ENSNGAG00000007930	Pan2	99	75.373	ENSATEG00000024030	pan2	100	75.602	Anabas_testudineus
ENSNGAG00000007930	Pan2	94	85.169	ENSAPLG00000005195	PAN2	100	85.169	Anas_platyrhynchos
ENSNGAG00000007930	Pan2	100	84.372	ENSACAG00000007067	PAN2	100	84.372	Anolis_carolinensis
ENSNGAG00000007930	Pan2	100	96.839	ENSANAG00000036468	PAN2	100	96.839	Aotus_nancymaae
ENSNGAG00000007930	Pan2	98	60.051	ENSACLG00000023821	pan2	99	59.966	Astatotilapia_calliptera
ENSNGAG00000007930	Pan2	100	75.411	ENSACLG00000023674	pan2	99	75.707	Astatotilapia_calliptera
ENSNGAG00000007930	Pan2	99	75.478	ENSAMXG00000005418	pan2	98	75.478	Astyanax_mexicanus
ENSNGAG00000007930	Pan2	100	96.506	ENSBTAG00000004376	PAN2	100	96.506	Bos_taurus
ENSNGAG00000007930	Pan2	100	97.171	ENSCJAG00000011141	PAN2	100	97.171	Callithrix_jacchus
ENSNGAG00000007930	Pan2	100	96.589	ENSCAFG00000000119	PAN2	100	96.589	Canis_familiaris
ENSNGAG00000007930	Pan2	100	95.871	ENSCAFG00020024865	PAN2	100	95.871	Canis_lupus_dingo
ENSNGAG00000007930	Pan2	100	95.854	ENSCHIG00000026935	PAN2	100	95.854	Capra_hircus
ENSNGAG00000007930	Pan2	100	96.517	ENSTSYG00000006927	PAN2	100	97.483	Carlito_syrichta
ENSNGAG00000007930	Pan2	100	95.934	ENSCPOG00000014918	PAN2	100	95.934	Cavia_porcellus
ENSNGAG00000007930	Pan2	100	97.171	ENSCCAG00000036637	PAN2	100	97.171	Cebus_capucinus
ENSNGAG00000007930	Pan2	100	96.922	ENSCATG00000045076	PAN2	100	96.922	Cercocebus_atys
ENSNGAG00000007930	Pan2	100	96.017	ENSCLAG00000011700	PAN2	100	96.017	Chinchilla_lanigera
ENSNGAG00000007930	Pan2	100	96.922	ENSCSAG00000005173	PAN2	100	96.922	Chlorocebus_sabaeus
ENSNGAG00000007930	Pan2	100	85.786	ENSCPBG00000014029	PAN2	100	85.786	Chrysemys_picta_bellii
ENSNGAG00000007930	Pan2	85	52.130	ENSCSAVG00000003833	-	99	55.198	Ciona_savignyi
ENSNGAG00000007930	Pan2	100	94.846	ENSCANG00000017798	PAN2	100	94.846	Colobus_angolensis_palliatus
ENSNGAG00000007930	Pan2	100	97.336	ENSCGRG00001019707	Pan2	100	97.336	Cricetulus_griseus_chok1gshd
ENSNGAG00000007930	Pan2	100	96.680	ENSCGRG00000009996	Pan2	100	96.680	Cricetulus_griseus_crigri
ENSNGAG00000007930	Pan2	100	71.358	ENSCSEG00000021529	pan2	99	71.642	Cynoglossus_semilaevis
ENSNGAG00000007930	Pan2	100	75.145	ENSCVAG00000010197	pan2	100	75.145	Cyprinodon_variegatus
ENSNGAG00000007930	Pan2	100	74.135	ENSDARG00000074675	pan2	99	74.505	Danio_rerio
ENSNGAG00000007930	Pan2	100	96.173	ENSDNOG00000010940	PAN2	100	96.173	Dasypus_novemcinctus
ENSNGAG00000007930	Pan2	93	41.878	FBgn0033352	PAN2	96	41.933	Drosophila_melanogaster
ENSNGAG00000007930	Pan2	75	96.791	ENSETEG00000012041	PAN2	82	96.791	Echinops_telfairi
ENSNGAG00000007930	Pan2	98	59.133	ENSEBUG00000002773	pan2	98	59.388	Eptatretus_burgeri
ENSNGAG00000007930	Pan2	100	96.694	ENSEASG00005005235	PAN2	100	96.694	Equus_asinus_asinus
ENSNGAG00000007930	Pan2	100	97.088	ENSECAG00000019814	PAN2	100	97.088	Equus_caballus
ENSNGAG00000007930	Pan2	99	74.568	ENSELUG00000024604	pan2	99	74.856	Esox_lucius
ENSNGAG00000007930	Pan2	100	97.171	ENSFCAG00000012021	PAN2	100	97.171	Felis_catus
ENSNGAG00000007930	Pan2	99	84.396	ENSFALG00000000464	PAN2	98	84.396	Ficedula_albicollis
ENSNGAG00000007930	Pan2	100	96.186	ENSFDAG00000017104	PAN2	100	96.186	Fukomys_damarensis
ENSNGAG00000007930	Pan2	90	74.946	ENSFHEG00000000157	pan2	96	74.946	Fundulus_heteroclitus
ENSNGAG00000007930	Pan2	100	73.806	ENSGMOG00000007249	pan2	99	73.970	Gadus_morhua
ENSNGAG00000007930	Pan2	100	85.204	ENSGALG00000031512	PAN2	100	85.204	Gallus_gallus
ENSNGAG00000007930	Pan2	100	76.407	ENSGAFG00000000284	pan2	100	76.407	Gambusia_affinis
ENSNGAG00000007930	Pan2	100	74.321	ENSGACG00000010722	pan2	99	74.733	Gasterosteus_aculeatus
ENSNGAG00000007930	Pan2	100	85.287	ENSGAGG00000007868	PAN2	100	85.287	Gopherus_agassizii
ENSNGAG00000007930	Pan2	100	97.005	ENSGGOG00000009115	PAN2	100	97.005	Gorilla_gorilla
ENSNGAG00000007930	Pan2	100	75.268	ENSHBUG00000005234	pan2	99	75.624	Haplochromis_burtoni
ENSNGAG00000007930	Pan2	99	96.405	ENSHGLG00000005647	PAN2	99	96.405	Heterocephalus_glaber_female
ENSNGAG00000007930	Pan2	99	96.154	ENSHGLG00100014057	PAN2	99	96.154	Heterocephalus_glaber_male
ENSNGAG00000007930	Pan2	100	74.547	ENSHCOG00000007920	pan2	99	74.547	Hippocampus_comes
ENSNGAG00000007930	Pan2	100	74.835	ENSIPUG00000011065	PAN2	99	74.835	Ictalurus_punctatus
ENSNGAG00000007930	Pan2	94	97.468	ENSSTOG00000015974	PAN2	100	97.468	Ictidomys_tridecemlineatus
ENSNGAG00000007930	Pan2	99	97.145	ENSJJAG00000013044	Pan2	97	97.145	Jaculus_jaculus
ENSNGAG00000007930	Pan2	100	75.453	ENSKMAG00000006192	pan2	99	75.556	Kryptolebias_marmoratus
ENSNGAG00000007930	Pan2	93	80.112	ENSLBEG00000015763	pan2	97	81.073	Labrus_bergylta
ENSNGAG00000007930	Pan2	100	72.683	ENSLACG00000018694	PAN2	100	72.764	Latimeria_chalumnae
ENSNGAG00000007930	Pan2	100	76.543	ENSLOCG00000004333	pan2	99	76.872	Lepisosteus_oculatus
ENSNGAG00000007930	Pan2	100	94.855	ENSLAFG00000014873	PAN2	100	94.855	Loxodonta_africana
ENSNGAG00000007930	Pan2	100	96.839	ENSMFAG00000002293	PAN2	100	96.839	Macaca_fascicularis
ENSNGAG00000007930	Pan2	100	96.839	ENSMMUG00000013482	PAN2	100	96.839	Macaca_mulatta
ENSNGAG00000007930	Pan2	100	96.922	ENSMNEG00000033264	PAN2	100	96.922	Macaca_nemestrina
ENSNGAG00000007930	Pan2	100	97.005	ENSMLEG00000037388	PAN2	100	97.005	Mandrillus_leucophaeus
ENSNGAG00000007930	Pan2	100	75.865	ENSMAMG00000001624	pan2	100	76.030	Mastacembelus_armatus
ENSNGAG00000007930	Pan2	98	60.998	ENSMZEG00005026472	pan2	98	60.914	Maylandia_zebra
ENSNGAG00000007930	Pan2	100	75.411	ENSMZEG00005026462	pan2	99	75.707	Maylandia_zebra
ENSNGAG00000007930	Pan2	97	85.542	ENSMGAG00000001439	PAN2	100	85.542	Meleagris_gallopavo
ENSNGAG00000007930	Pan2	99	96.901	ENSMAUG00000012602	Pan2	99	96.906	Mesocricetus_auratus
ENSNGAG00000007930	Pan2	100	97.005	ENSMICG00000017661	PAN2	100	97.005	Microcebus_murinus
ENSNGAG00000007930	Pan2	100	96.253	ENSMOCG00000007191	Pan2	100	96.253	Microtus_ochrogaster
ENSNGAG00000007930	Pan2	99	74.875	ENSMMOG00000009313	pan2	98	75.062	Mola_mola
ENSNGAG00000007930	Pan2	100	75.616	ENSMALG00000013377	pan2	100	75.616	Monopterus_albus
ENSNGAG00000007930	Pan2	100	96.512	MGP_CAROLIEiJ_G0015930	Pan2	100	96.512	Mus_caroli
ENSNGAG00000007930	Pan2	100	96.669	ENSMUSG00000005682	Pan2	100	96.669	Mus_musculus
ENSNGAG00000007930	Pan2	100	96.512	MGP_PahariEiJ_G0031154	Pan2	100	96.512	Mus_pahari
ENSNGAG00000007930	Pan2	100	96.753	MGP_SPRETEiJ_G0016755	Pan2	100	96.753	Mus_spretus
ENSNGAG00000007930	Pan2	100	97.005	ENSMPUG00000001383	PAN2	100	97.005	Mustela_putorius_furo
ENSNGAG00000007930	Pan2	100	95.757	ENSMLUG00000006737	PAN2	100	95.757	Myotis_lucifugus
ENSNGAG00000007930	Pan2	92	86.364	ENSNBRG00000006585	pan2	97	89.055	Neolamprologus_brichardi
ENSNGAG00000007930	Pan2	100	91.708	ENSNLEG00000017499	PAN2	100	96.568	Nomascus_leucogenys
ENSNGAG00000007930	Pan2	100	92.346	ENSMEUG00000010125	PAN2	100	92.346	Notamacropus_eugenii
ENSNGAG00000007930	Pan2	100	96.100	ENSOPRG00000001468	PAN2	100	96.100	Ochotona_princeps
ENSNGAG00000007930	Pan2	100	95.940	ENSODEG00000007203	PAN2	100	95.940	Octodon_degus
ENSNGAG00000007930	Pan2	100	75.368	ENSONIG00000016732	pan2	100	75.368	Oreochromis_niloticus
ENSNGAG00000007930	Pan2	81	74.624	ENSOANG00000005151	PAN2	99	74.749	Ornithorhynchus_anatinus
ENSNGAG00000007930	Pan2	100	96.349	ENSOCUG00000007227	PAN2	100	96.349	Oryctolagus_cuniculus
ENSNGAG00000007930	Pan2	100	74.918	ENSORLG00000015195	pan2	100	74.918	Oryzias_latipes
ENSNGAG00000007930	Pan2	100	74.979	ENSORLG00020000277	pan2	100	74.979	Oryzias_latipes_hni
ENSNGAG00000007930	Pan2	100	74.897	ENSORLG00015005193	pan2	100	74.897	Oryzias_latipes_hsok
ENSNGAG00000007930	Pan2	100	75.411	ENSOMEG00000022087	pan2	98	78.756	Oryzias_melastigma
ENSNGAG00000007930	Pan2	100	95.857	ENSOGAG00000030620	PAN2	100	95.857	Otolemur_garnettii
ENSNGAG00000007930	Pan2	100	96.672	ENSOARG00000009379	PAN2	100	96.672	Ovis_aries
ENSNGAG00000007930	Pan2	100	96.922	ENSPPAG00000001208	PAN2	100	96.922	Pan_paniscus
ENSNGAG00000007930	Pan2	100	97.255	ENSPPRG00000021586	PAN2	100	97.255	Panthera_pardus
ENSNGAG00000007930	Pan2	100	93.383	ENSPTIG00000012494	PAN2	100	93.383	Panthera_tigris_altaica
ENSNGAG00000007930	Pan2	100	96.922	ENSPTRG00000052054	PAN2	100	96.922	Pan_troglodytes
ENSNGAG00000007930	Pan2	92	97.202	ENSPANG00000018906	PAN2	100	97.202	Papio_anubis
ENSNGAG00000007930	Pan2	100	75.618	ENSPKIG00000003973	pan2	99	75.618	Paramormyrops_kingsleyae
ENSNGAG00000007930	Pan2	100	82.158	ENSPSIG00000003267	PAN2	100	82.158	Pelodiscus_sinensis
ENSNGAG00000007930	Pan2	100	75.083	ENSPMGG00000023186	pan2	100	75.083	Periophthalmus_magnuspinnatus
ENSNGAG00000007930	Pan2	100	96.183	ENSPEMG00000018505	Pan2	100	96.183	Peromyscus_maniculatus_bairdii
ENSNGAG00000007930	Pan2	91	69.013	ENSPMAG00000004731	pan2	100	69.013	Petromyzon_marinus
ENSNGAG00000007930	Pan2	100	92.512	ENSPCIG00000024643	PAN2	100	92.512	Phascolarctos_cinereus
ENSNGAG00000007930	Pan2	100	75.638	ENSPFOG00000008392	pan2	99	75.638	Poecilia_formosa
ENSNGAG00000007930	Pan2	100	75.556	ENSPLAG00000009198	pan2	99	75.556	Poecilia_latipinna
ENSNGAG00000007930	Pan2	100	75.745	ENSPMEG00000001484	pan2	100	75.745	Poecilia_mexicana
ENSNGAG00000007930	Pan2	100	75.808	ENSPREG00000000900	pan2	100	75.808	Poecilia_reticulata
ENSNGAG00000007930	Pan2	89	97.823	ENSPPYG00000004656	PAN2	100	97.823	Pongo_abelii
ENSNGAG00000007930	Pan2	92	96.380	ENSPCAG00000011047	PAN2	99	96.380	Procavia_capensis
ENSNGAG00000007930	Pan2	100	96.755	ENSPCOG00000018263	PAN2	100	96.755	Propithecus_coquereli
ENSNGAG00000007930	Pan2	94	98.000	ENSPVAG00000007591	PAN2	94	98.000	Pteropus_vampyrus
ENSNGAG00000007930	Pan2	99	75.687	ENSPNYG00000002629	pan2	99	75.790	Pundamilia_nyererei
ENSNGAG00000007930	Pan2	100	76.155	ENSPNAG00000027140	pan2	99	76.155	Pygocentrus_nattereri
ENSNGAG00000007930	Pan2	100	96.253	ENSRNOG00000032441	Pan2	100	96.253	Rattus_norvegicus
ENSNGAG00000007930	Pan2	100	96.839	ENSRBIG00000029591	PAN2	100	96.839	Rhinopithecus_bieti
ENSNGAG00000007930	Pan2	100	96.755	ENSRROG00000041950	PAN2	100	96.755	Rhinopithecus_roxellana
ENSNGAG00000007930	Pan2	74	38.841	YGL094C	-	96	38.551	Saccharomyces_cerevisiae
ENSNGAG00000007930	Pan2	100	96.839	ENSSBOG00000027343	PAN2	100	96.839	Saimiri_boliviensis_boliviensis
ENSNGAG00000007930	Pan2	92	91.316	ENSSHAG00000000122	PAN2	100	92.098	Sarcophilus_harrisii
ENSNGAG00000007930	Pan2	99	76.407	ENSSFOG00015017740	pan2	99	76.407	Scleropages_formosus
ENSNGAG00000007930	Pan2	100	74.401	ENSSMAG00000020901	pan2	100	74.401	Scophthalmus_maximus
ENSNGAG00000007930	Pan2	100	75.369	ENSSDUG00000001840	pan2	99	75.596	Seriola_dumerili
ENSNGAG00000007930	Pan2	100	75.309	ENSSLDG00000013866	pan2	100	75.289	Seriola_lalandi_dorsalis
ENSNGAG00000007930	Pan2	93	94.302	ENSSARG00000013350	PAN2	92	94.302	Sorex_araneus
ENSNGAG00000007930	Pan2	92	85.212	ENSSPUG00000004270	PAN2	99	85.392	Sphenodon_punctatus
ENSNGAG00000007930	Pan2	100	75.534	ENSSPAG00000019970	pan2	100	75.329	Stegastes_partitus
ENSNGAG00000007930	Pan2	100	96.423	ENSSSCG00000000393	PAN2	100	96.423	Sus_scrofa
ENSNGAG00000007930	Pan2	100	75.267	ENSTRUG00000014260	pan2	99	75.267	Takifugu_rubripes
ENSNGAG00000007930	Pan2	100	75.205	ENSTNIG00000012537	pan2	99	75.349	Tetraodon_nigroviridis
ENSNGAG00000007930	Pan2	80	96.774	ENSTTRG00000007150	PAN2	80	96.774	Tursiops_truncatus
ENSNGAG00000007930	Pan2	100	97.007	ENSUAMG00000026522	PAN2	100	97.007	Ursus_americanus
ENSNGAG00000007930	Pan2	100	96.520	ENSUMAG00000017020	PAN2	100	96.520	Ursus_maritimus
ENSNGAG00000007930	Pan2	79	98.030	ENSVPAG00000007309	PAN2	85	98.030	Vicugna_pacos
ENSNGAG00000007930	Pan2	100	96.339	ENSVVUG00000021878	PAN2	100	96.339	Vulpes_vulpes
ENSNGAG00000007930	Pan2	99	79.118	ENSXETG00000009434	pan2	100	79.494	Xenopus_tropicalis
ENSNGAG00000007930	Pan2	100	71.914	ENSXCOG00000014391	pan2	100	71.914	Xiphophorus_couchianus
ENSNGAG00000007930	Pan2	100	75.911	ENSXMAG00000011661	pan2	100	75.911	Xiphophorus_maculatus