EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000008268 (Gene tree)
Gene ID: 103742408
Gene Symbol: Gar1
Alias: C430047J18Rik|GAR1|Nola1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 10082 bases
Position: chrKL199074.1:470404-480485
Accession: 103742408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000005744	Gar1	PF04410.14	1.5e-38	1	1
ENSNGAP00000005748	Gar1	PF04410.14	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000009985	-	1144	XM_008843457	ENSNGAP00000005744	214 (aa)	XP_008841679	UPI0004ECFFD4
ENSNGAT00000009992	-	234	-	ENSNGAP00000005748	77 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000008268's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000008268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000008268	Gar1	92	98.592	ENSG00000109534	GAR1	51	98.182	Homo_sapiens
ENSNGAG00000008268	Gar1	71	96.364	ENSAPOG00000019754	gar1	52	92.727	Acanthochromis_polyacanthus
ENSNGAG00000008268	Gar1	99	96.053	ENSAMEG00000004605	GAR1	54	96.364	Ailuropoda_melanoleuca
ENSNGAG00000008268	Gar1	71	96.364	ENSAOCG00000020947	gar1	51	92.727	Amphiprion_ocellaris
ENSNGAG00000008268	Gar1	71	96.364	ENSAPEG00000001676	gar1	51	92.727	Amphiprion_percula
ENSNGAG00000008268	Gar1	71	96.364	ENSATEG00000003733	gar1	51	92.727	Anabas_testudineus
ENSNGAG00000008268	Gar1	78	91.667	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSNGAG00000008268	Gar1	71	92.727	ENSACAG00000010031	GAR1	51	89.815	Anolis_carolinensis
ENSNGAG00000008268	Gar1	92	98.592	ENSANAG00000021608	GAR1	50	98.182	Aotus_nancymaae
ENSNGAG00000008268	Gar1	71	94.545	ENSAMXG00000015752	gar1	66	76.159	Astyanax_mexicanus
ENSNGAG00000008268	Gar1	71	98.182	ENSBTAG00000000748	GAR1	52	97.273	Bos_taurus
ENSNGAG00000008268	Gar1	92	98.592	ENSCJAG00000004041	GAR1	50	98.182	Callithrix_jacchus
ENSNGAG00000008268	Gar1	99	96.053	ENSCAFG00020015566	GAR1	57	97.273	Canis_lupus_dingo
ENSNGAG00000008268	Gar1	99	92.891	ENSCHIG00000016026	-	97	92.891	Capra_hircus
ENSNGAG00000008268	Gar1	53	95.122	ENSCHIG00000011049	-	55	84.545	Capra_hircus
ENSNGAG00000008268	Gar1	71	87.273	ENSTSYG00000026632	-	56	90.000	Carlito_syrichta
ENSNGAG00000008268	Gar1	99	93.671	ENSTSYG00000013668	-	52	98.182	Carlito_syrichta
ENSNGAG00000008268	Gar1	71	96.364	ENSCAPG00000014977	-	69	96.364	Cavia_aperea
ENSNGAG00000008268	Gar1	99	94.805	ENSCPOG00000004216	GAR1	51	97.273	Cavia_porcellus
ENSNGAG00000008268	Gar1	92	98.592	ENSCCAG00000029372	GAR1	50	98.182	Cebus_capucinus
ENSNGAG00000008268	Gar1	92	98.592	ENSCATG00000021854	GAR1	56	98.182	Cercocebus_atys
ENSNGAG00000008268	Gar1	99	94.805	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSNGAG00000008268	Gar1	92	98.592	ENSCSAG00000003922	GAR1	56	98.182	Chlorocebus_sabaeus
ENSNGAG00000008268	Gar1	99	96.104	ENSCHOG00000007484	-	51	96.581	Choloepus_hoffmanni
ENSNGAG00000008268	Gar1	71	94.545	ENSCPBG00000004310	GAR1	56	90.909	Chrysemys_picta_bellii
ENSNGAG00000008268	Gar1	71	96.364	ENSCANG00000039262	GAR1	51	97.273	Colobus_angolensis_palliatus
ENSNGAG00000008268	Gar1	71	96.364	ENSCGRG00001003919	Gar1	50	96.364	Cricetulus_griseus_chok1gshd
ENSNGAG00000008268	Gar1	71	96.364	ENSCGRG00000010165	-	72	96.739	Cricetulus_griseus_crigri
ENSNGAG00000008268	Gar1	71	94.545	ENSCSEG00000003525	gar1	50	91.818	Cynoglossus_semilaevis
ENSNGAG00000008268	Gar1	71	94.545	ENSCVAG00000002103	gar1	66	86.131	Cyprinodon_variegatus
ENSNGAG00000008268	Gar1	90	89.855	ENSDARG00000076526	gar1	62	82.734	Danio_rerio
ENSNGAG00000008268	Gar1	99	94.737	ENSDNOG00000037632	GAR1	56	97.273	Dasypus_novemcinctus
ENSNGAG00000008268	Gar1	92	100.000	ENSDORG00000000482	Gar1	51	98.182	Dipodomys_ordii
ENSNGAG00000008268	Gar1	74	57.895	FBgn0011824	CG4038	73	58.772	Drosophila_melanogaster
ENSNGAG00000008268	Gar1	99	96.053	ENSEASG00005004658	GAR1	97	95.775	Equus_asinus_asinus
ENSNGAG00000008268	Gar1	99	96.053	ENSECAG00000013624	GAR1	56	97.273	Equus_caballus
ENSNGAG00000008268	Gar1	99	96.053	ENSFCAG00000040791	-	100	93.519	Felis_catus
ENSNGAG00000008268	Gar1	84	56.835	ENSFCAG00000025841	-	57	63.025	Felis_catus
ENSNGAG00000008268	Gar1	78	93.333	ENSFALG00000006445	GAR1	50	92.593	Ficedula_albicollis
ENSNGAG00000008268	Gar1	100	95.000	ENSFDAG00000006333	-	100	95.000	Fukomys_damarensis
ENSNGAG00000008268	Gar1	71	92.727	ENSFHEG00000008068	gar1	72	79.221	Fundulus_heteroclitus
ENSNGAG00000008268	Gar1	69	96.226	ENSGAGG00000004393	GAR1	56	90.826	Gopherus_agassizii
ENSNGAG00000008268	Gar1	92	98.592	ENSGGOG00000008681	GAR1	51	97.273	Gorilla_gorilla
ENSNGAG00000008268	Gar1	91	78.571	ENSGGOG00000036205	-	54	79.817	Gorilla_gorilla
ENSNGAG00000008268	Gar1	100	96.104	ENSHGLG00000000493	GAR1	93	97.183	Heterocephalus_glaber_female
ENSNGAG00000008268	Gar1	100	96.104	ENSHGLG00100016873	-	93	97.183	Heterocephalus_glaber_male
ENSNGAG00000008268	Gar1	71	94.545	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSNGAG00000008268	Gar1	100	97.403	ENSSTOG00000005577	GAR1	100	97.403	Ictidomys_tridecemlineatus
ENSNGAG00000008268	Gar1	71	94.545	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSNGAG00000008268	Gar1	71	92.727	ENSLACG00000003306	GAR1	65	87.963	Latimeria_chalumnae
ENSNGAG00000008268	Gar1	92	98.592	ENSMFAG00000024592	GAR1	51	98.182	Macaca_fascicularis
ENSNGAG00000008268	Gar1	74	78.947	ENSMFAG00000003572	-	54	83.636	Macaca_fascicularis
ENSNGAG00000008268	Gar1	92	98.592	ENSMMUG00000021225	GAR1	51	98.182	Macaca_mulatta
ENSNGAG00000008268	Gar1	92	98.592	ENSMNEG00000042594	GAR1	51	98.182	Macaca_nemestrina
ENSNGAG00000008268	Gar1	92	98.592	ENSMLEG00000002496	GAR1	50	98.182	Mandrillus_leucophaeus
ENSNGAG00000008268	Gar1	78	91.667	ENSMGAG00000011058	GAR1	75	81.065	Meleagris_gallopavo
ENSNGAG00000008268	Gar1	71	96.364	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSNGAG00000008268	Gar1	99	91.250	ENSMICG00000003326	GAR1	51	97.273	Microcebus_murinus
ENSNGAG00000008268	Gar1	71	98.182	ENSMOCG00000001340	Gar1	70	98.182	Microtus_ochrogaster
ENSNGAG00000008268	Gar1	71	96.364	ENSMMOG00000004156	gar1	52	93.458	Mola_mola
ENSNGAG00000008268	Gar1	71	94.545	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSNGAG00000008268	Gar1	71	98.182	MGP_CAROLIEiJ_G0025627	Gar1	70	98.182	Mus_caroli
ENSNGAG00000008268	Gar1	71	98.182	ENSMUSG00000028010	Gar1	92	93.548	Mus_musculus
ENSNGAG00000008268	Gar1	71	98.182	MGP_PahariEiJ_G0027076	Gar1	70	98.182	Mus_pahari
ENSNGAG00000008268	Gar1	71	98.182	MGP_SPRETEiJ_G0026580	Gar1	92	93.548	Mus_spretus
ENSNGAG00000008268	Gar1	99	96.053	ENSMPUG00000008615	GAR1	53	97.273	Mustela_putorius_furo
ENSNGAG00000008268	Gar1	74	77.193	ENSNLEG00000034282	-	56	82.727	Nomascus_leucogenys
ENSNGAG00000008268	Gar1	92	98.592	ENSNLEG00000016578	GAR1	51	98.182	Nomascus_leucogenys
ENSNGAG00000008268	Gar1	99	96.104	ENSODEG00000011083	GAR1	57	95.455	Octodon_degus
ENSNGAG00000008268	Gar1	71	96.364	ENSONIG00000001085	gar1	50	92.727	Oreochromis_niloticus
ENSNGAG00000008268	Gar1	71	98.182	ENSOCUG00000003901	GAR1	51	97.273	Oryctolagus_cuniculus
ENSNGAG00000008268	Gar1	71	96.364	ENSORLG00000020583	gar1	50	92.727	Oryzias_latipes
ENSNGAG00000008268	Gar1	71	96.364	ENSORLG00020008602	gar1	50	92.727	Oryzias_latipes_hni
ENSNGAG00000008268	Gar1	71	96.364	ENSORLG00015017643	gar1	50	92.727	Oryzias_latipes_hsok
ENSNGAG00000008268	Gar1	71	96.364	ENSOGAG00000004693	GAR1	52	97.273	Otolemur_garnettii
ENSNGAG00000008268	Gar1	71	98.182	ENSOARG00000004910	GAR1	52	97.273	Ovis_aries
ENSNGAG00000008268	Gar1	92	98.592	ENSPPAG00000014081	GAR1	55	98.182	Pan_paniscus
ENSNGAG00000008268	Gar1	99	96.053	ENSPPRG00000023697	GAR1	53	97.273	Panthera_pardus
ENSNGAG00000008268	Gar1	99	96.053	ENSPTIG00000021565	GAR1	53	97.273	Panthera_tigris_altaica
ENSNGAG00000008268	Gar1	92	98.592	ENSPTRG00000016364	GAR1	56	98.182	Pan_troglodytes
ENSNGAG00000008268	Gar1	71	80.000	ENSPTRG00000049340	-	70	75.342	Pan_troglodytes
ENSNGAG00000008268	Gar1	74	78.947	ENSPANG00000033062	-	64	73.077	Papio_anubis
ENSNGAG00000008268	Gar1	92	98.592	ENSPANG00000000639	GAR1	51	98.182	Papio_anubis
ENSNGAG00000008268	Gar1	71	94.545	ENSPSIG00000002970	GAR1	50	90.909	Pelodiscus_sinensis
ENSNGAG00000008268	Gar1	71	96.364	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSNGAG00000008268	Gar1	71	94.545	ENSPFOG00000024155	gar1	71	83.333	Poecilia_formosa
ENSNGAG00000008268	Gar1	71	94.545	ENSPLAG00000015056	gar1	71	83.333	Poecilia_latipinna
ENSNGAG00000008268	Gar1	71	94.545	ENSPMEG00000009320	gar1	53	92.727	Poecilia_mexicana
ENSNGAG00000008268	Gar1	99	96.104	ENSPPYG00000014996	GAR1	51	98.182	Pongo_abelii
ENSNGAG00000008268	Gar1	92	98.592	ENSPCOG00000027049	GAR1	56	98.182	Propithecus_coquereli
ENSNGAG00000008268	Gar1	73	98.214	ENSRNOG00000061146	Gar1	64	97.273	Rattus_norvegicus
ENSNGAG00000008268	Gar1	92	98.592	ENSRBIG00000019547	GAR1	56	98.182	Rhinopithecus_bieti
ENSNGAG00000008268	Gar1	73	76.786	ENSRBIG00000042411	-	53	82.727	Rhinopithecus_bieti
ENSNGAG00000008268	Gar1	92	98.592	ENSRROG00000028454	GAR1	56	98.182	Rhinopithecus_roxellana
ENSNGAG00000008268	Gar1	73	76.786	ENSRROG00000044348	-	53	82.727	Rhinopithecus_roxellana
ENSNGAG00000008268	Gar1	92	98.592	ENSSBOG00000024785	GAR1	51	98.182	Saimiri_boliviensis_boliviensis
ENSNGAG00000008268	Gar1	71	94.545	ENSSMAG00000009976	gar1	50	90.000	Scophthalmus_maximus
ENSNGAG00000008268	Gar1	71	96.364	ENSSLDG00000023264	gar1	52	91.818	Seriola_lalandi_dorsalis
ENSNGAG00000008268	Gar1	71	94.545	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSNGAG00000008268	Gar1	71	96.364	ENSSPAG00000005974	gar1	52	91.597	Stegastes_partitus
ENSNGAG00000008268	Gar1	99	96.053	ENSSSCG00000009137	GAR1	54	97.273	Sus_scrofa
ENSNGAG00000008268	Gar1	78	93.333	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSNGAG00000008268	Gar1	84	87.692	ENSTRUG00000020580	gar1	53	89.091	Takifugu_rubripes
ENSNGAG00000008268	Gar1	68	94.231	ENSTNIG00000013023	gar1	63	91.818	Tetraodon_nigroviridis
ENSNGAG00000008268	Gar1	99	96.053	ENSUAMG00000005652	GAR1	57	97.273	Ursus_americanus
ENSNGAG00000008268	Gar1	99	96.053	ENSUMAG00000000776	GAR1	53	97.273	Ursus_maritimus
ENSNGAG00000008268	Gar1	99	96.053	ENSVVUG00000017612	GAR1	57	97.273	Vulpes_vulpes