EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000009268 (Gene tree)
Gene ID: 103727309
Gene Symbol: Rif1
Alias: 5730435J01Rik|6530403D07Rik|D2Ertd145e
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 69727 bases
Position: chrKL205481.1:157388-227114
Accession: 103727309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000006324	Rif1_N	PF12231.8	3.5e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000011289	-	7122	XM_008825146	ENSNGAP00000006324	2373 (aa)	XP_008823368	-

Gene Model

Click here to download ENSNGAG00000009268's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000009268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000009268	Rif1	100	72.944	ENSG00000080345	RIF1	99	84.086	Homo_sapiens
ENSNGAG00000009268	Rif1	99	73.007	ENSAMEG00000008461	RIF1	100	72.539	Ailuropoda_melanoleuca
ENSNGAG00000009268	Rif1	54	48.843	ENSAOCG00000017231	rif1	50	49.643	Amphiprion_ocellaris
ENSNGAG00000009268	Rif1	66	54.957	ENSAPEG00000013228	rif1	53	53.974	Amphiprion_percula
ENSNGAG00000009268	Rif1	54	48.480	ENSATEG00000022887	rif1	65	48.097	Anabas_testudineus
ENSNGAG00000009268	Rif1	87	59.587	ENSACAG00000003714	RIF1	91	59.587	Anolis_carolinensis
ENSNGAG00000009268	Rif1	100	73.156	ENSANAG00000024840	RIF1	100	73.196	Aotus_nancymaae
ENSNGAG00000009268	Rif1	93	71.545	ENSBTAG00000021020	RIF1	99	71.626	Bos_taurus
ENSNGAG00000009268	Rif1	100	72.200	ENSCJAG00000003138	RIF1	100	72.200	Callithrix_jacchus
ENSNGAG00000009268	Rif1	100	71.935	ENSCAFG00000005670	RIF1	97	71.935	Canis_familiaris
ENSNGAG00000009268	Rif1	100	71.765	ENSCAFG00020016401	RIF1	100	72.238	Canis_lupus_dingo
ENSNGAG00000009268	Rif1	99	72.278	ENSCHIG00000020327	RIF1	99	72.319	Capra_hircus
ENSNGAG00000009268	Rif1	99	70.375	ENSTSYG00000008861	RIF1	100	70.415	Carlito_syrichta
ENSNGAG00000009268	Rif1	84	81.395	ENSCAPG00000008957	RIF1	96	81.395	Cavia_aperea
ENSNGAG00000009268	Rif1	99	69.581	ENSCPOG00000037898	RIF1	99	69.458	Cavia_porcellus
ENSNGAG00000009268	Rif1	100	71.808	ENSCCAG00000024760	RIF1	100	71.808	Cebus_capucinus
ENSNGAG00000009268	Rif1	100	73.457	ENSCATG00000033353	RIF1	100	73.406	Cercocebus_atys
ENSNGAG00000009268	Rif1	96	70.650	ENSCLAG00000001517	RIF1	99	70.512	Chinchilla_lanigera
ENSNGAG00000009268	Rif1	100	73.285	ENSCSAG00000016089	RIF1	100	73.234	Chlorocebus_sabaeus
ENSNGAG00000009268	Rif1	97	73.043	ENSCHOG00000007187	RIF1	97	73.043	Choloepus_hoffmanni
ENSNGAG00000009268	Rif1	94	68.247	ENSCPBG00000025885	RIF1	97	67.821	Chrysemys_picta_bellii
ENSNGAG00000009268	Rif1	100	71.480	ENSCANG00000028962	RIF1	100	72.693	Colobus_angolensis_palliatus
ENSNGAG00000009268	Rif1	99	74.550	ENSCGRG00001024589	Rif1	100	74.509	Cricetulus_griseus_chok1gshd
ENSNGAG00000009268	Rif1	98	74.907	ENSCGRG00000010713	Rif1	100	74.876	Cricetulus_griseus_crigri
ENSNGAG00000009268	Rif1	54	48.464	ENSCSEG00000003945	rif1	56	48.593	Cynoglossus_semilaevis
ENSNGAG00000009268	Rif1	69	46.204	ENSCVAG00000022479	rif1	56	46.570	Cyprinodon_variegatus
ENSNGAG00000009268	Rif1	99	70.636	ENSDNOG00000011194	RIF1	97	70.717	Dasypus_novemcinctus
ENSNGAG00000009268	Rif1	92	69.592	ENSETEG00000012421	RIF1	92	69.190	Echinops_telfairi
ENSNGAG00000009268	Rif1	96	84.825	ENSEASG00005023434	RIF1	99	84.825	Equus_asinus_asinus
ENSNGAG00000009268	Rif1	100	72.694	ENSECAG00000012679	RIF1	100	72.735	Equus_caballus
ENSNGAG00000009268	Rif1	65	50.677	ENSELUG00000006826	rif1	51	54.358	Esox_lucius
ENSNGAG00000009268	Rif1	100	71.767	ENSFCAG00000029742	RIF1	100	72.021	Felis_catus
ENSNGAG00000009268	Rif1	80	62.275	ENSFALG00000013874	RIF1	91	62.275	Ficedula_albicollis
ENSNGAG00000009268	Rif1	99	71.684	ENSFDAG00000006538	RIF1	99	71.562	Fukomys_damarensis
ENSNGAG00000009268	Rif1	57	49.302	ENSGMOG00000003517	rif1	82	49.306	Gadus_morhua
ENSNGAG00000009268	Rif1	71	49.349	ENSGAFG00000017196	rif1	70	54.446	Gambusia_affinis
ENSNGAG00000009268	Rif1	51	49.162	ENSGACG00000008579	rif1	55	48.265	Gasterosteus_aculeatus
ENSNGAG00000009268	Rif1	92	67.887	ENSGAGG00000012595	RIF1	100	68.451	Gopherus_agassizii
ENSNGAG00000009268	Rif1	89	87.697	ENSGGOG00000040178	RIF1	96	87.697	Gorilla_gorilla
ENSNGAG00000009268	Rif1	54	49.850	ENSHBUG00000007125	rif1	57	49.850	Haplochromis_burtoni
ENSNGAG00000009268	Rif1	94	71.697	ENSHGLG00100009807	RIF1	99	71.569	Heterocephalus_glaber_male
ENSNGAG00000009268	Rif1	68	49.127	ENSHCOG00000015943	rif1	62	49.048	Hippocampus_comes
ENSNGAG00000009268	Rif1	52	51.608	ENSIPUG00000021703	rif1	65	51.518	Ictalurus_punctatus
ENSNGAG00000009268	Rif1	100	73.242	ENSSTOG00000020712	RIF1	100	72.884	Ictidomys_tridecemlineatus
ENSNGAG00000009268	Rif1	99	72.509	ENSJJAG00000023000	Rif1	100	72.799	Jaculus_jaculus
ENSNGAG00000009268	Rif1	67	49.884	ENSLBEG00000023196	rif1	59	49.730	Labrus_bergylta
ENSNGAG00000009268	Rif1	88	63.284	ENSLACG00000005425	RIF1	89	63.095	Latimeria_chalumnae
ENSNGAG00000009268	Rif1	84	49.191	ENSLOCG00000002657	rif1	82	48.408	Lepisosteus_oculatus
ENSNGAG00000009268	Rif1	99	71.110	ENSLAFG00000009796	RIF1	100	71.110	Loxodonta_africana
ENSNGAG00000009268	Rif1	100	73.336	ENSMFAG00000032233	RIF1	100	73.285	Macaca_fascicularis
ENSNGAG00000009268	Rif1	100	73.336	ENSMMUG00000008611	RIF1	100	73.285	Macaca_mulatta
ENSNGAG00000009268	Rif1	100	73.376	ENSMNEG00000031616	RIF1	100	73.325	Macaca_nemestrina
ENSNGAG00000009268	Rif1	100	73.457	ENSMLEG00000042945	RIF1	100	73.406	Mandrillus_leucophaeus
ENSNGAG00000009268	Rif1	91	53.091	ENSMAMG00000001745	rif1	84	53.182	Mastacembelus_armatus
ENSNGAG00000009268	Rif1	68	49.924	ENSMZEG00005020920	rif1	72	49.924	Maylandia_zebra
ENSNGAG00000009268	Rif1	86	58.840	ENSMGAG00000012732	RIF1	91	58.356	Meleagris_gallopavo
ENSNGAG00000009268	Rif1	94	94.429	ENSMAUG00000013158	Rif1	99	94.429	Mesocricetus_auratus
ENSNGAG00000009268	Rif1	100	74.346	ENSMICG00000046127	RIF1	100	74.346	Microcebus_murinus
ENSNGAG00000009268	Rif1	99	73.423	ENSMOCG00000009381	Rif1	100	72.798	Microtus_ochrogaster
ENSNGAG00000009268	Rif1	66	48.475	ENSMMOG00000006519	rif1	65	48.354	Mola_mola
ENSNGAG00000009268	Rif1	100	59.131	ENSMODG00000003703	RIF1	100	58.952	Monodelphis_domestica
ENSNGAG00000009268	Rif1	67	47.951	ENSMALG00000016759	rif1	67	52.321	Monopterus_albus
ENSNGAG00000009268	Rif1	99	73.527	MGP_CAROLIEiJ_G0023555	Rif1	100	73.527	Mus_caroli
ENSNGAG00000009268	Rif1	99	73.901	ENSMUSG00000036202	Rif1	100	73.901	Mus_musculus
ENSNGAG00000009268	Rif1	99	72.538	MGP_PahariEiJ_G0025006	Rif1	100	72.252	Mus_pahari
ENSNGAG00000009268	Rif1	99	74.132	MGP_SPRETEiJ_G0024476	Rif1	100	74.132	Mus_spretus
ENSNGAG00000009268	Rif1	100	72.137	ENSMPUG00000000371	RIF1	100	72.137	Mustela_putorius_furo
ENSNGAG00000009268	Rif1	89	70.422	ENSMLUG00000003376	RIF1	100	70.422	Myotis_lucifugus
ENSNGAG00000009268	Rif1	66	49.883	ENSNBRG00000014257	rif1	64	48.224	Neolamprologus_brichardi
ENSNGAG00000009268	Rif1	100	71.365	ENSNLEG00000010955	RIF1	100	71.669	Nomascus_leucogenys
ENSNGAG00000009268	Rif1	80	76.339	ENSMEUG00000007601	-	85	76.339	Notamacropus_eugenii
ENSNGAG00000009268	Rif1	99	69.727	ENSODEG00000003950	RIF1	99	69.971	Octodon_degus
ENSNGAG00000009268	Rif1	54	50.492	ENSONIG00000013657	rif1	61	50.038	Oreochromis_niloticus
ENSNGAG00000009268	Rif1	84	73.446	ENSOANG00000006078	-	85	73.446	Ornithorhynchus_anatinus
ENSNGAG00000009268	Rif1	100	71.723	ENSOCUG00000017435	RIF1	100	71.405	Oryctolagus_cuniculus
ENSNGAG00000009268	Rif1	66	48.694	ENSORLG00020001302	rif1	69	48.041	Oryzias_latipes_hni
ENSNGAG00000009268	Rif1	66	48.694	ENSORLG00015000009	rif1	68	48.773	Oryzias_latipes_hsok
ENSNGAG00000009268	Rif1	65	48.841	ENSOMEG00000021513	rif1	67	48.186	Oryzias_melastigma
ENSNGAG00000009268	Rif1	99	72.617	ENSOGAG00000006141	RIF1	99	72.496	Otolemur_garnettii
ENSNGAG00000009268	Rif1	99	72.532	ENSOARG00000008930	RIF1	99	72.573	Ovis_aries
ENSNGAG00000009268	Rif1	100	73.097	ENSPPAG00000023754	RIF1	100	73.097	Pan_paniscus
ENSNGAG00000009268	Rif1	100	71.578	ENSPPRG00000003618	RIF1	100	72.072	Panthera_pardus
ENSNGAG00000009268	Rif1	100	71.618	ENSPTIG00000020652	RIF1	100	71.778	Panthera_tigris_altaica
ENSNGAG00000009268	Rif1	100	73.097	ENSPTRG00000012534	RIF1	100	73.097	Pan_troglodytes
ENSNGAG00000009268	Rif1	100	73.376	ENSPANG00000008525	RIF1	100	73.376	Papio_anubis
ENSNGAG00000009268	Rif1	99	40.657	ENSPKIG00000004267	rif1	53	51.914	Paramormyrops_kingsleyae
ENSNGAG00000009268	Rif1	66	45.756	ENSPMGG00000016141	rif1	77	45.447	Periophthalmus_magnuspinnatus
ENSNGAG00000009268	Rif1	99	75.826	ENSPEMG00000000446	Rif1	99	75.826	Peromyscus_maniculatus_bairdii
ENSNGAG00000009268	Rif1	99	59.255	ENSPCIG00000009185	RIF1	99	59.495	Phascolarctos_cinereus
ENSNGAG00000009268	Rif1	62	51.683	ENSPFOG00000000554	-	50	51.364	Poecilia_formosa
ENSNGAG00000009268	Rif1	68	51.469	ENSPFOG00000017804	rif1	53	51.270	Poecilia_formosa
ENSNGAG00000009268	Rif1	68	51.028	ENSPLAG00000017945	rif1	72	51.108	Poecilia_latipinna
ENSNGAG00000009268	Rif1	57	61.798	ENSPREG00000018052	rif1	68	54.595	Poecilia_reticulata
ENSNGAG00000009268	Rif1	100	72.823	ENSPPYG00000012846	RIF1	100	73.127	Pongo_abelii
ENSNGAG00000009268	Rif1	82	77.670	ENSPCAG00000009032	RIF1	83	77.670	Procavia_capensis
ENSNGAG00000009268	Rif1	100	74.658	ENSPCOG00000027888	RIF1	100	74.658	Propithecus_coquereli
ENSNGAG00000009268	Rif1	92	84.787	ENSPVAG00000014276	RIF1	95	84.787	Pteropus_vampyrus
ENSNGAG00000009268	Rif1	68	48.092	ENSPNYG00000012940	rif1	71	48.092	Pundamilia_nyererei
ENSNGAG00000009268	Rif1	99	72.453	ENSRNOG00000054901	Rif1	100	72.127	Rattus_norvegicus
ENSNGAG00000009268	Rif1	100	71.843	ENSRBIG00000003704	RIF1	100	72.177	Rhinopithecus_bieti
ENSNGAG00000009268	Rif1	100	72.691	ENSRROG00000028206	RIF1	100	73.024	Rhinopithecus_roxellana
ENSNGAG00000009268	Rif1	97	87.097	ENSSBOG00000029530	RIF1	100	87.097	Saimiri_boliviensis_boliviensis
ENSNGAG00000009268	Rif1	99	59.469	ENSSHAG00000018552	RIF1	100	58.713	Sarcophilus_harrisii
ENSNGAG00000009268	Rif1	67	51.109	ENSSFOG00015021539	rif1	83	48.571	Scleropages_formosus
ENSNGAG00000009268	Rif1	68	48.764	ENSSMAG00000011704	rif1	63	48.777	Scophthalmus_maximus
ENSNGAG00000009268	Rif1	76	47.321	ENSSDUG00000015632	rif1	70	47.914	Seriola_dumerili
ENSNGAG00000009268	Rif1	59	80.339	ENSSARG00000007161	-	59	80.339	Sorex_araneus
ENSNGAG00000009268	Rif1	92	68.376	ENSSPUG00000003062	RIF1	97	68.376	Sphenodon_punctatus
ENSNGAG00000009268	Rif1	54	57.258	ENSSPAG00000018359	rif1	79	57.258	Stegastes_partitus
ENSNGAG00000009268	Rif1	100	72.610	ENSSSCG00000016395	RIF1	100	72.621	Sus_scrofa
ENSNGAG00000009268	Rif1	66	51.524	ENSTNIG00000011538	rif1	68	49.850	Tetraodon_nigroviridis
ENSNGAG00000009268	Rif1	83	83.544	ENSTBEG00000016082	RIF1	81	83.544	Tupaia_belangeri
ENSNGAG00000009268	Rif1	100	73.678	ENSTTRG00000011190	RIF1	100	73.578	Tursiops_truncatus
ENSNGAG00000009268	Rif1	90	71.594	ENSUAMG00000026385	RIF1	99	71.505	Ursus_americanus
ENSNGAG00000009268	Rif1	100	72.933	ENSUMAG00000000337	RIF1	100	72.852	Ursus_maritimus
ENSNGAG00000009268	Rif1	100	70.776	ENSVPAG00000002162	RIF1	100	70.864	Vicugna_pacos
ENSNGAG00000009268	Rif1	100	71.688	ENSVVUG00000011293	RIF1	100	71.486	Vulpes_vulpes
ENSNGAG00000009268	Rif1	69	48.081	ENSXMAG00000000506	rif1	67	48.142	Xiphophorus_maculatus