EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000009384 (Gene tree)
Gene ID: 103725009
Gene Symbol: Ddb1
Alias: DNA repair protein|damage-specific DNA-binding protein|DNA repair|p127-Ddb1
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 29475 bases
Position: chrKL198651.1:74484-103958
Accession: 103725009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000006337	CPSF_A	PF03178.15	2.6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000011319	-	4355	XM_008822339	ENSNGAP00000006337	1140 (aa)	XP_008820561	UPI0004ED64FB

Gene Model

Click here to download ENSNGAG00000009384's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03420	Nucleotide excision repair	KEGG
ngi04120	Ubiquitin mediated proteolysis	KEGG
ngi05161	Hepatitis B	KEGG
ngi05170	Human immunodeficiency virus 1 infection	KEGG
ngi05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000009384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000009384	Ddb1	100	99.386	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSNGAG00000009384	Ddb1	98	91.375	ENSAPOG00000005036	ddb1	99	91.429	Acanthochromis_polyacanthus
ENSNGAG00000009384	Ddb1	100	99.474	ENSAMEG00000016518	DDB1	100	99.474	Ailuropoda_melanoleuca
ENSNGAG00000009384	Ddb1	86	91.735	ENSACIG00000020624	ddb1	99	91.735	Amphilophus_citrinellus
ENSNGAG00000009384	Ddb1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSNGAG00000009384	Ddb1	100	91.140	ENSAPEG00000000092	ddb1	100	91.140	Amphiprion_percula
ENSNGAG00000009384	Ddb1	94	91.628	ENSATEG00000020571	ddb1	97	91.628	Anabas_testudineus
ENSNGAG00000009384	Ddb1	98	96.444	ENSAPLG00000007174	DDB1	99	96.444	Anas_platyrhynchos
ENSNGAG00000009384	Ddb1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSNGAG00000009384	Ddb1	100	99.386	ENSANAG00000021878	DDB1	100	99.386	Aotus_nancymaae
ENSNGAG00000009384	Ddb1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSNGAG00000009384	Ddb1	100	99.298	ENSBTAG00000021569	DDB1	93	99.298	Bos_taurus
ENSNGAG00000009384	Ddb1	100	37.040	WBGene00010890	ddb-1	100	37.040	Caenorhabditis_elegans
ENSNGAG00000009384	Ddb1	100	99.386	ENSCJAG00000019319	DDB1	100	99.386	Callithrix_jacchus
ENSNGAG00000009384	Ddb1	100	99.474	ENSCAFG00000016264	DDB1	100	99.474	Canis_familiaris
ENSNGAG00000009384	Ddb1	94	99.163	ENSCAFG00020012722	DDB1	99	99.163	Canis_lupus_dingo
ENSNGAG00000009384	Ddb1	100	99.298	ENSCHIG00000014969	DDB1	100	99.298	Capra_hircus
ENSNGAG00000009384	Ddb1	100	98.947	ENSTSYG00000008027	DDB1	100	98.947	Carlito_syrichta
ENSNGAG00000009384	Ddb1	98	99.017	ENSCAPG00000010786	DDB1	100	99.017	Cavia_aperea
ENSNGAG00000009384	Ddb1	100	99.035	ENSCPOG00000009956	DDB1	100	99.035	Cavia_porcellus
ENSNGAG00000009384	Ddb1	100	99.386	ENSCCAG00000035883	DDB1	100	99.386	Cebus_capucinus
ENSNGAG00000009384	Ddb1	100	96.875	ENSCATG00000044495	DDB1	100	96.875	Cercocebus_atys
ENSNGAG00000009384	Ddb1	100	99.123	ENSCLAG00000004126	DDB1	100	99.123	Chinchilla_lanigera
ENSNGAG00000009384	Ddb1	100	99.386	ENSCSAG00000006392	DDB1	100	99.386	Chlorocebus_sabaeus
ENSNGAG00000009384	Ddb1	88	92.235	ENSCHOG00000011377	DDB1	90	92.235	Choloepus_hoffmanni
ENSNGAG00000009384	Ddb1	100	97.456	ENSCPBG00000017728	DDB1	100	97.456	Chrysemys_picta_bellii
ENSNGAG00000009384	Ddb1	100	61.806	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSNGAG00000009384	Ddb1	94	60.184	ENSCSAVG00000004783	-	100	60.184	Ciona_savignyi
ENSNGAG00000009384	Ddb1	100	99.386	ENSCANG00000019948	DDB1	100	99.386	Colobus_angolensis_palliatus
ENSNGAG00000009384	Ddb1	100	99.561	ENSCGRG00001016599	Ddb1	100	99.561	Cricetulus_griseus_chok1gshd
ENSNGAG00000009384	Ddb1	100	99.561	ENSCGRG00000013427	Ddb1	100	99.561	Cricetulus_griseus_crigri
ENSNGAG00000009384	Ddb1	93	91.140	ENSCSEG00000012499	ddb1	99	89.575	Cynoglossus_semilaevis
ENSNGAG00000009384	Ddb1	94	91.333	ENSCVAG00000019531	ddb1	99	91.333	Cyprinodon_variegatus
ENSNGAG00000009384	Ddb1	100	88.529	ENSDARG00000074431	ddb1	100	88.646	Danio_rerio
ENSNGAG00000009384	Ddb1	94	98.884	ENSDNOG00000014884	DDB1	97	98.884	Dasypus_novemcinctus
ENSNGAG00000009384	Ddb1	84	99.548	ENSDORG00000000127	Ddb1	100	99.548	Dipodomys_ordii
ENSNGAG00000009384	Ddb1	100	60.786	FBgn0260962	pic	100	60.786	Drosophila_melanogaster
ENSNGAG00000009384	Ddb1	71	99.606	ENSETEG00000001053	-	71	99.606	Echinops_telfairi
ENSNGAG00000009384	Ddb1	78	84.589	ENSEBUG00000014593	ddb1	97	84.589	Eptatretus_burgeri
ENSNGAG00000009384	Ddb1	100	99.298	ENSEASG00005008184	DDB1	100	99.298	Equus_asinus_asinus
ENSNGAG00000009384	Ddb1	100	99.211	ENSECAG00000012136	DDB1	100	99.211	Equus_caballus
ENSNGAG00000009384	Ddb1	85	97.138	ENSEEUG00000003194	DDB1	85	97.138	Erinaceus_europaeus
ENSNGAG00000009384	Ddb1	100	91.053	ENSELUG00000023868	ddb1	100	91.053	Esox_lucius
ENSNGAG00000009384	Ddb1	100	99.474	ENSFCAG00000029716	DDB1	100	99.474	Felis_catus
ENSNGAG00000009384	Ddb1	100	96.850	ENSFALG00000011981	DDB1	100	96.850	Ficedula_albicollis
ENSNGAG00000009384	Ddb1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
ENSNGAG00000009384	Ddb1	90	90.588	ENSFHEG00000022133	ddb1	99	90.588	Fundulus_heteroclitus
ENSNGAG00000009384	Ddb1	79	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSNGAG00000009384	Ddb1	100	97.018	ENSGALG00000042333	DDB1	100	97.018	Gallus_gallus
ENSNGAG00000009384	Ddb1	94	91.146	ENSGAFG00000013142	ddb1	99	91.146	Gambusia_affinis
ENSNGAG00000009384	Ddb1	96	90.559	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSNGAG00000009384	Ddb1	95	97.509	ENSGAGG00000014124	DDB1	100	97.509	Gopherus_agassizii
ENSNGAG00000009384	Ddb1	100	99.386	ENSGGOG00000004052	DDB1	100	99.386	Gorilla_gorilla
ENSNGAG00000009384	Ddb1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSNGAG00000009384	Ddb1	100	98.947	ENSHGLG00000018430	DDB1	100	98.947	Heterocephalus_glaber_female
ENSNGAG00000009384	Ddb1	100	97.895	ENSHGLG00100014475	DDB1	100	97.895	Heterocephalus_glaber_male
ENSNGAG00000009384	Ddb1	94	90.892	ENSHCOG00000018670	ddb1	98	90.892	Hippocampus_comes
ENSNGAG00000009384	Ddb1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSNGAG00000009384	Ddb1	100	99.386	ENSSTOG00000007552	DDB1	100	99.386	Ictidomys_tridecemlineatus
ENSNGAG00000009384	Ddb1	100	99.211	ENSJJAG00000017769	Ddb1	100	99.211	Jaculus_jaculus
ENSNGAG00000009384	Ddb1	94	91.240	ENSKMAG00000002315	ddb1	99	91.240	Kryptolebias_marmoratus
ENSNGAG00000009384	Ddb1	85	91.399	ENSLBEG00000017065	ddb1	99	91.399	Labrus_bergylta
ENSNGAG00000009384	Ddb1	100	93.695	ENSLACG00000017611	DDB1	100	93.695	Latimeria_chalumnae
ENSNGAG00000009384	Ddb1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSNGAG00000009384	Ddb1	100	99.211	ENSLAFG00000011513	DDB1	100	99.211	Loxodonta_africana
ENSNGAG00000009384	Ddb1	100	99.386	ENSMFAG00000042035	DDB1	100	99.386	Macaca_fascicularis
ENSNGAG00000009384	Ddb1	99	99.381	ENSMMUG00000002691	DDB1	99	99.381	Macaca_mulatta
ENSNGAG00000009384	Ddb1	100	99.386	ENSMNEG00000031559	DDB1	100	99.386	Macaca_nemestrina
ENSNGAG00000009384	Ddb1	100	99.386	ENSMLEG00000044136	DDB1	100	99.386	Mandrillus_leucophaeus
ENSNGAG00000009384	Ddb1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSNGAG00000009384	Ddb1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSNGAG00000009384	Ddb1	94	96.369	ENSMGAG00000004990	DDB1	100	96.369	Meleagris_gallopavo
ENSNGAG00000009384	Ddb1	100	99.561	ENSMAUG00000012926	Ddb1	100	99.561	Mesocricetus_auratus
ENSNGAG00000009384	Ddb1	100	99.386	ENSMICG00000013703	DDB1	100	99.386	Microcebus_murinus
ENSNGAG00000009384	Ddb1	100	99.298	ENSMOCG00000020499	Ddb1	100	99.298	Microtus_ochrogaster
ENSNGAG00000009384	Ddb1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSNGAG00000009384	Ddb1	100	89.100	ENSMODG00000020353	DDB1	100	89.100	Monodelphis_domestica
ENSNGAG00000009384	Ddb1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSNGAG00000009384	Ddb1	100	99.474	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.474	Mus_caroli
ENSNGAG00000009384	Ddb1	100	99.298	ENSMUSG00000024740	Ddb1	100	99.298	Mus_musculus
ENSNGAG00000009384	Ddb1	100	99.474	MGP_PahariEiJ_G0014189	Ddb1	100	99.474	Mus_pahari
ENSNGAG00000009384	Ddb1	100	99.386	MGP_SPRETEiJ_G0023609	Ddb1	100	99.386	Mus_spretus
ENSNGAG00000009384	Ddb1	100	96.140	ENSMPUG00000014200	DDB1	100	96.140	Mustela_putorius_furo
ENSNGAG00000009384	Ddb1	100	99.123	ENSMLUG00000013232	DDB1	100	99.123	Myotis_lucifugus
ENSNGAG00000009384	Ddb1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSNGAG00000009384	Ddb1	100	96.267	ENSNLEG00000002022	DDB1	100	96.267	Nomascus_leucogenys
ENSNGAG00000009384	Ddb1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSNGAG00000009384	Ddb1	90	90.689	ENSOPRG00000008254	DDB1	90	90.689	Ochotona_princeps
ENSNGAG00000009384	Ddb1	100	98.772	ENSODEG00000002419	DDB1	100	98.772	Octodon_degus
ENSNGAG00000009384	Ddb1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSNGAG00000009384	Ddb1	91	97.771	ENSOANG00000004897	DDB1	100	97.771	Ornithorhynchus_anatinus
ENSNGAG00000009384	Ddb1	100	99.386	ENSOCUG00000001667	DDB1	100	99.386	Oryctolagus_cuniculus
ENSNGAG00000009384	Ddb1	96	90.009	ENSORLG00000001399	ddb1	98	91.258	Oryzias_latipes
ENSNGAG00000009384	Ddb1	96	89.918	ENSORLG00020001277	ddb1	97	89.918	Oryzias_latipes_hni
ENSNGAG00000009384	Ddb1	94	91.070	ENSORLG00015002080	ddb1	99	91.070	Oryzias_latipes_hsok
ENSNGAG00000009384	Ddb1	96	89.881	ENSOMEG00000006181	ddb1	99	89.881	Oryzias_melastigma
ENSNGAG00000009384	Ddb1	100	99.211	ENSOGAG00000016103	DDB1	100	99.211	Otolemur_garnettii
ENSNGAG00000009384	Ddb1	99	99.288	ENSOARG00000011716	DDB1	98	99.288	Ovis_aries
ENSNGAG00000009384	Ddb1	100	99.386	ENSPPAG00000035343	DDB1	100	99.386	Pan_paniscus
ENSNGAG00000009384	Ddb1	100	99.474	ENSPPRG00000013300	DDB1	100	99.474	Panthera_pardus
ENSNGAG00000009384	Ddb1	98	99.464	ENSPTIG00000006909	DDB1	98	99.464	Panthera_tigris_altaica
ENSNGAG00000009384	Ddb1	100	99.386	ENSPTRG00000003737	DDB1	100	99.386	Pan_troglodytes
ENSNGAG00000009384	Ddb1	100	99.386	ENSPANG00000000242	DDB1	100	99.386	Papio_anubis
ENSNGAG00000009384	Ddb1	94	91.426	ENSPKIG00000019213	ddb1	94	91.426	Paramormyrops_kingsleyae
ENSNGAG00000009384	Ddb1	98	96.797	ENSPSIG00000013275	DDB1	100	96.797	Pelodiscus_sinensis
ENSNGAG00000009384	Ddb1	86	91.429	ENSPMGG00000021179	ddb1	99	91.429	Periophthalmus_magnuspinnatus
ENSNGAG00000009384	Ddb1	100	99.561	ENSPEMG00000012241	Ddb1	100	99.561	Peromyscus_maniculatus_bairdii
ENSNGAG00000009384	Ddb1	89	86.542	ENSPMAG00000008479	ddb1	100	86.542	Petromyzon_marinus
ENSNGAG00000009384	Ddb1	100	98.860	ENSPCIG00000002643	DDB1	100	98.860	Phascolarctos_cinereus
ENSNGAG00000009384	Ddb1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSNGAG00000009384	Ddb1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSNGAG00000009384	Ddb1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSNGAG00000009384	Ddb1	94	91.256	ENSPREG00000004440	ddb1	98	91.256	Poecilia_reticulata
ENSNGAG00000009384	Ddb1	100	94.415	ENSPPYG00000003193	DDB1	100	94.415	Pongo_abelii
ENSNGAG00000009384	Ddb1	85	99.104	ENSPCAG00000011040	DDB1	85	99.104	Procavia_capensis
ENSNGAG00000009384	Ddb1	100	97.811	ENSPCOG00000015176	DDB1	100	97.811	Propithecus_coquereli
ENSNGAG00000009384	Ddb1	100	99.298	ENSPVAG00000003847	DDB1	100	99.298	Pteropus_vampyrus
ENSNGAG00000009384	Ddb1	94	91.240	ENSPNAG00000006635	ddb1	97	91.240	Pygocentrus_nattereri
ENSNGAG00000009384	Ddb1	100	99.474	ENSRNOG00000020715	Ddb1	100	99.474	Rattus_norvegicus
ENSNGAG00000009384	Ddb1	100	99.386	ENSRBIG00000033611	DDB1	100	99.386	Rhinopithecus_bieti
ENSNGAG00000009384	Ddb1	100	99.386	ENSRROG00000041407	DDB1	100	99.386	Rhinopithecus_roxellana
ENSNGAG00000009384	Ddb1	100	99.386	ENSSBOG00000019775	DDB1	100	99.386	Saimiri_boliviensis_boliviensis
ENSNGAG00000009384	Ddb1	94	96.729	ENSSHAG00000011600	DDB1	100	96.729	Sarcophilus_harrisii
ENSNGAG00000009384	Ddb1	94	91.543	ENSSFOG00015011151	ddb1	97	91.543	Scleropages_formosus
ENSNGAG00000009384	Ddb1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSNGAG00000009384	Ddb1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSNGAG00000009384	Ddb1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSNGAG00000009384	Ddb1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSNGAG00000009384	Ddb1	100	97.544	ENSSPUG00000019338	DDB1	100	97.544	Sphenodon_punctatus
ENSNGAG00000009384	Ddb1	94	91.535	ENSSPAG00000009888	ddb1	99	91.535	Stegastes_partitus
ENSNGAG00000009384	Ddb1	100	98.421	ENSSSCG00000013094	DDB1	100	98.421	Sus_scrofa
ENSNGAG00000009384	Ddb1	100	96.842	ENSTGUG00000006414	DDB1	100	96.842	Taeniopygia_guttata
ENSNGAG00000009384	Ddb1	94	90.214	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSNGAG00000009384	Ddb1	88	84.930	ENSTNIG00000009565	ddb1	99	84.930	Tetraodon_nigroviridis
ENSNGAG00000009384	Ddb1	92	94.517	ENSTTRG00000011055	DDB1	94	94.517	Tursiops_truncatus
ENSNGAG00000009384	Ddb1	94	99.163	ENSUAMG00000017793	DDB1	93	99.163	Ursus_americanus
ENSNGAG00000009384	Ddb1	94	99.163	ENSUMAG00000011788	DDB1	98	99.163	Ursus_maritimus
ENSNGAG00000009384	Ddb1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSNGAG00000009384	Ddb1	100	99.386	ENSVVUG00000004987	DDB1	100	99.386	Vulpes_vulpes
ENSNGAG00000009384	Ddb1	100	93.007	ENSXETG00000008820	ddb1	100	93.007	Xenopus_tropicalis
ENSNGAG00000009384	Ddb1	86	91.224	ENSXCOG00000013956	ddb1	99	91.224	Xiphophorus_couchianus
ENSNGAG00000009384	Ddb1	94	91.146	ENSXMAG00000000022	ddb1	99	91.146	Xiphophorus_maculatus