EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000009703 (Gene tree)
Gene ID: 103735571
Gene Symbol: Usb1
Alias: AA960436
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 15627 bases
Position: chrKL201137.1:289744-305370
Accession: 103735571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000006519	HVSL	PF09749.9	8.9e-66	1	1
ENSNGAP00000006506	HVSL	PF09749.9	9e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000011677	-	810	-	ENSNGAP00000006519	269 (aa)	-	-
ENSNGAT00000011658	-	1288	XM_008834867	ENSNGAP00000006506	269 (aa)	XP_008833089	UPI0004ED21DA

Gene Model

Click here to download ENSNGAG00000009703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000009703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000009703	Usb1	100	82.528	ENSG00000103005	USB1	100	89.252	Homo_sapiens
ENSNGAG00000009703	Usb1	98	49.821	ENSAPOG00000011942	usb1	99	49.821	Acanthochromis_polyacanthus
ENSNGAG00000009703	Usb1	100	84.015	ENSAMEG00000017205	USB1	100	84.015	Ailuropoda_melanoleuca
ENSNGAG00000009703	Usb1	84	55.310	ENSACIG00000012234	usb1	83	55.310	Amphilophus_citrinellus
ENSNGAG00000009703	Usb1	98	50.534	ENSAOCG00000014831	usb1	99	50.534	Amphiprion_ocellaris
ENSNGAG00000009703	Usb1	98	50.890	ENSAPEG00000000296	usb1	99	50.890	Amphiprion_percula
ENSNGAG00000009703	Usb1	98	50.357	ENSATEG00000009348	usb1	99	49.286	Anabas_testudineus
ENSNGAG00000009703	Usb1	83	69.912	ENSAPLG00000002756	USB1	100	69.912	Anas_platyrhynchos
ENSNGAG00000009703	Usb1	84	62.882	ENSACAG00000015481	USB1	100	62.882	Anolis_carolinensis
ENSNGAG00000009703	Usb1	100	84.015	ENSANAG00000035640	USB1	100	84.015	Aotus_nancymaae
ENSNGAG00000009703	Usb1	90	50.584	ENSACLG00000020586	usb1	99	50.000	Astatotilapia_calliptera
ENSNGAG00000009703	Usb1	84	51.556	ENSAMXG00000040146	usb1	75	51.556	Astyanax_mexicanus
ENSNGAG00000009703	Usb1	100	84.387	ENSBTAG00000015758	USB1	100	83.271	Bos_taurus
ENSNGAG00000009703	Usb1	100	84.387	ENSCJAG00000011733	USB1	100	84.387	Callithrix_jacchus
ENSNGAG00000009703	Usb1	99	83.456	ENSCAFG00000008556	USB1	73	83.456	Canis_familiaris
ENSNGAG00000009703	Usb1	99	83.643	ENSCAFG00020009263	USB1	99	83.643	Canis_lupus_dingo
ENSNGAG00000009703	Usb1	100	82.156	ENSCHIG00000024290	USB1	100	82.156	Capra_hircus
ENSNGAG00000009703	Usb1	100	84.387	ENSTSYG00000006997	USB1	100	84.758	Carlito_syrichta
ENSNGAG00000009703	Usb1	86	69.828	ENSCAPG00000009057	USB1	100	69.828	Cavia_aperea
ENSNGAG00000009703	Usb1	100	81.784	ENSCPOG00000014325	USB1	100	81.413	Cavia_porcellus
ENSNGAG00000009703	Usb1	100	84.758	ENSCCAG00000022132	USB1	100	84.758	Cebus_capucinus
ENSNGAG00000009703	Usb1	100	82.900	ENSCATG00000032174	USB1	100	83.333	Cercocebus_atys
ENSNGAG00000009703	Usb1	65	89.205	ENSCLAG00000007363	USB1	100	89.205	Chinchilla_lanigera
ENSNGAG00000009703	Usb1	100	83.643	ENSCSAG00000004783	USB1	100	84.074	Chlorocebus_sabaeus
ENSNGAG00000009703	Usb1	100	60.791	ENSCPBG00000026943	USB1	100	61.511	Chrysemys_picta_bellii
ENSNGAG00000009703	Usb1	83	32.609	ENSCING00000011490	-	86	32.609	Ciona_intestinalis
ENSNGAG00000009703	Usb1	81	32.599	ENSCSAVG00000000894	-	81	32.599	Ciona_savignyi
ENSNGAG00000009703	Usb1	100	82.900	ENSCANG00000037135	USB1	100	82.963	Colobus_angolensis_palliatus
ENSNGAG00000009703	Usb1	100	88.848	ENSCGRG00001011243	USB1	100	88.848	Cricetulus_griseus_chok1gshd
ENSNGAG00000009703	Usb1	100	88.848	ENSCGRG00000013252	USB1	100	88.848	Cricetulus_griseus_crigri
ENSNGAG00000009703	Usb1	98	47.445	ENSCSEG00000013881	usb1	99	47.080	Cynoglossus_semilaevis
ENSNGAG00000009703	Usb1	83	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSNGAG00000009703	Usb1	83	50.893	ENSDARG00000003841	usb1	99	45.818	Danio_rerio
ENSNGAG00000009703	Usb1	100	82.528	ENSDORG00000001888	Usb1	100	81.784	Dipodomys_ordii
ENSNGAG00000009703	Usb1	76	40.476	FBgn0037713	CG16790	97	36.015	Drosophila_melanogaster
ENSNGAG00000009703	Usb1	100	70.632	ENSETEG00000019682	USB1	100	70.632	Echinops_telfairi
ENSNGAG00000009703	Usb1	83	50.901	ENSEBUG00000005889	usb1	78	50.901	Eptatretus_burgeri
ENSNGAG00000009703	Usb1	100	84.758	ENSEASG00005005484	USB1	100	84.387	Equus_asinus_asinus
ENSNGAG00000009703	Usb1	100	84.387	ENSECAG00000019493	USB1	91	84.015	Equus_caballus
ENSNGAG00000009703	Usb1	65	80.682	ENSEEUG00000000154	USB1	100	60.967	Erinaceus_europaeus
ENSNGAG00000009703	Usb1	84	50.000	ENSELUG00000010974	usb1	99	45.221	Esox_lucius
ENSNGAG00000009703	Usb1	100	85.502	ENSFCAG00000002693	USB1	100	85.130	Felis_catus
ENSNGAG00000009703	Usb1	100	61.710	ENSFALG00000006876	USB1	99	61.710	Ficedula_albicollis
ENSNGAG00000009703	Usb1	100	83.271	ENSFDAG00000010052	USB1	100	82.528	Fukomys_damarensis
ENSNGAG00000009703	Usb1	86	49.590	ENSFHEG00000012334	usb1	77	54.124	Fundulus_heteroclitus
ENSNGAG00000009703	Usb1	83	52.018	ENSGMOG00000004228	usb1	99	52.018	Gadus_morhua
ENSNGAG00000009703	Usb1	83	68.444	ENSGALG00000035604	USB1	100	64.576	Gallus_gallus
ENSNGAG00000009703	Usb1	98	50.181	ENSGAFG00000021890	usb1	82	53.509	Gambusia_affinis
ENSNGAG00000009703	Usb1	98	49.638	ENSGACG00000003257	usb1	99	49.638	Gasterosteus_aculeatus
ENSNGAG00000009703	Usb1	100	64.234	ENSGAGG00000022572	USB1	100	61.905	Gopherus_agassizii
ENSNGAG00000009703	Usb1	100	82.900	ENSGGOG00000017147	USB1	100	82.900	Gorilla_gorilla
ENSNGAG00000009703	Usb1	90	53.112	ENSHBUG00000009823	usb1	99	51.254	Haplochromis_burtoni
ENSNGAG00000009703	Usb1	100	84.015	ENSHGLG00000016078	USB1	98	83.271	Heterocephalus_glaber_female
ENSNGAG00000009703	Usb1	100	84.015	ENSHGLG00100005562	USB1	98	83.271	Heterocephalus_glaber_male
ENSNGAG00000009703	Usb1	81	56.221	ENSHCOG00000015633	usb1	99	52.652	Hippocampus_comes
ENSNGAG00000009703	Usb1	91	51.210	ENSIPUG00000008601	usb1	86	51.210	Ictalurus_punctatus
ENSNGAG00000009703	Usb1	100	84.615	ENSSTOG00000007548	USB1	100	84.615	Ictidomys_tridecemlineatus
ENSNGAG00000009703	Usb1	100	90.706	ENSJJAG00000021859	Usb1	100	90.706	Jaculus_jaculus
ENSNGAG00000009703	Usb1	93	50.575	ENSKMAG00000007200	usb1	99	48.929	Kryptolebias_marmoratus
ENSNGAG00000009703	Usb1	76	52.683	ENSLBEG00000008452	usb1	64	54.211	Labrus_bergylta
ENSNGAG00000009703	Usb1	77	60.287	ENSLACG00000000105	USB1	72	60.287	Latimeria_chalumnae
ENSNGAG00000009703	Usb1	93	53.012	ENSLOCG00000000465	usb1	87	54.065	Lepisosteus_oculatus
ENSNGAG00000009703	Usb1	100	68.148	ENSLAFG00000002267	USB1	100	68.519	Loxodonta_africana
ENSNGAG00000009703	Usb1	100	83.271	ENSMFAG00000003926	USB1	100	83.704	Macaca_fascicularis
ENSNGAG00000009703	Usb1	100	83.271	ENSMMUG00000022669	USB1	100	83.704	Macaca_mulatta
ENSNGAG00000009703	Usb1	100	82.900	ENSMNEG00000042487	USB1	100	83.333	Macaca_nemestrina
ENSNGAG00000009703	Usb1	100	83.271	ENSMLEG00000028756	USB1	100	83.704	Mandrillus_leucophaeus
ENSNGAG00000009703	Usb1	98	50.903	ENSMAMG00000015092	usb1	99	50.181	Mastacembelus_armatus
ENSNGAG00000009703	Usb1	90	50.584	ENSMZEG00005010008	usb1	99	50.896	Maylandia_zebra
ENSNGAG00000009703	Usb1	100	86.617	ENSMAUG00000007832	Usb1	100	86.617	Mesocricetus_auratus
ENSNGAG00000009703	Usb1	100	82.528	ENSMICG00000004900	USB1	100	83.271	Microcebus_murinus
ENSNGAG00000009703	Usb1	100	85.874	ENSMOCG00000022647	Usb1	100	85.502	Microtus_ochrogaster
ENSNGAG00000009703	Usb1	85	53.070	ENSMMOG00000000490	usb1	99	49.621	Mola_mola
ENSNGAG00000009703	Usb1	100	66.423	ENSMODG00000014067	USB1	100	67.037	Monodelphis_domestica
ENSNGAG00000009703	Usb1	91	51.230	ENSMALG00000005930	usb1	99	49.466	Monopterus_albus
ENSNGAG00000009703	Usb1	100	87.361	MGP_CAROLIEiJ_G0031421	Usb1	100	90.265	Mus_caroli
ENSNGAG00000009703	Usb1	100	87.732	ENSMUSG00000031792	Usb1	100	90.265	Mus_musculus
ENSNGAG00000009703	Usb1	100	86.989	MGP_PahariEiJ_G0023019	Usb1	100	89.744	Mus_pahari
ENSNGAG00000009703	Usb1	100	86.617	MGP_SPRETEiJ_G0032540	Usb1	100	86.617	Mus_spretus
ENSNGAG00000009703	Usb1	100	83.271	ENSMPUG00000004684	USB1	96	83.271	Mustela_putorius_furo
ENSNGAG00000009703	Usb1	86	88.745	ENSMLUG00000007400	USB1	100	88.745	Myotis_lucifugus
ENSNGAG00000009703	Usb1	90	48.148	ENSNBRG00000008747	usb1	99	54.206	Neolamprologus_brichardi
ENSNGAG00000009703	Usb1	94	82.677	ENSNLEG00000003340	USB1	100	82.677	Nomascus_leucogenys
ENSNGAG00000009703	Usb1	57	58.710	ENSMEUG00000003328	-	100	61.290	Notamacropus_eugenii
ENSNGAG00000009703	Usb1	62	91.176	ENSOPRG00000011803	USB1	72	91.176	Ochotona_princeps
ENSNGAG00000009703	Usb1	100	84.387	ENSODEG00000016214	USB1	100	84.387	Octodon_degus
ENSNGAG00000009703	Usb1	98	51.971	ENSONIG00000011063	usb1	99	50.719	Oreochromis_niloticus
ENSNGAG00000009703	Usb1	83	71.111	ENSOANG00000012118	USB1	94	71.111	Ornithorhynchus_anatinus
ENSNGAG00000009703	Usb1	83	52.679	ENSORLG00000012479	usb1	99	48.175	Oryzias_latipes
ENSNGAG00000009703	Usb1	83	52.232	ENSORLG00020018671	usb1	99	47.810	Oryzias_latipes_hni
ENSNGAG00000009703	Usb1	91	48.828	ENSORLG00015009679	usb1	99	48.175	Oryzias_latipes_hsok
ENSNGAG00000009703	Usb1	83	52.232	ENSOMEG00000012930	usb1	99	49.091	Oryzias_melastigma
ENSNGAG00000009703	Usb1	100	77.695	ENSOGAG00000003273	USB1	100	77.695	Otolemur_garnettii
ENSNGAG00000009703	Usb1	90	83.539	ENSOARG00000001107	USB1	93	83.539	Ovis_aries
ENSNGAG00000009703	Usb1	100	83.271	ENSPPAG00000042137	USB1	100	83.271	Pan_paniscus
ENSNGAG00000009703	Usb1	100	85.240	ENSPPRG00000024797	USB1	100	85.130	Panthera_pardus
ENSNGAG00000009703	Usb1	100	85.130	ENSPTIG00000007506	USB1	100	85.130	Panthera_tigris_altaica
ENSNGAG00000009703	Usb1	100	76.208	ENSPTRG00000008172	USB1	100	89.720	Pan_troglodytes
ENSNGAG00000009703	Usb1	100	83.271	ENSPANG00000025138	USB1	100	83.704	Papio_anubis
ENSNGAG00000009703	Usb1	96	49.807	ENSPKIG00000015109	usb1	75	55.157	Paramormyrops_kingsleyae
ENSNGAG00000009703	Usb1	83	51.111	ENSPSIG00000004305	USB1	100	51.111	Pelodiscus_sinensis
ENSNGAG00000009703	Usb1	84	52.444	ENSPMGG00000017725	usb1	86	52.444	Periophthalmus_magnuspinnatus
ENSNGAG00000009703	Usb1	100	88.603	ENSPEMG00000016183	Usb1	100	87.132	Peromyscus_maniculatus_bairdii
ENSNGAG00000009703	Usb1	83	51.770	ENSPMAG00000000462	usb1	95	51.770	Petromyzon_marinus
ENSNGAG00000009703	Usb1	98	50.000	ENSPFOG00000011130	usb1	99	48.421	Poecilia_formosa
ENSNGAG00000009703	Usb1	98	50.000	ENSPLAG00000009820	usb1	99	48.070	Poecilia_latipinna
ENSNGAG00000009703	Usb1	98	50.362	ENSPMEG00000006402	usb1	99	48.772	Poecilia_mexicana
ENSNGAG00000009703	Usb1	86	50.000	ENSPREG00000001047	usb1	98	49.402	Poecilia_reticulata
ENSNGAG00000009703	Usb1	95	78.906	ENSPPYG00000007401	USB1	100	78.906	Pongo_abelii
ENSNGAG00000009703	Usb1	100	84.387	ENSPCOG00000022612	USB1	100	84.387	Propithecus_coquereli
ENSNGAG00000009703	Usb1	100	81.413	ENSPVAG00000004613	USB1	100	81.041	Pteropus_vampyrus
ENSNGAG00000009703	Usb1	98	51.254	ENSPNYG00000022262	usb1	99	51.254	Pundamilia_nyererei
ENSNGAG00000009703	Usb1	91	49.020	ENSPNAG00000011736	usb1	85	49.020	Pygocentrus_nattereri
ENSNGAG00000009703	Usb1	100	87.361	ENSRNOG00000013216	Usb1	100	87.361	Rattus_norvegicus
ENSNGAG00000009703	Usb1	100	77.695	ENSRBIG00000044466	USB1	100	91.121	Rhinopithecus_bieti
ENSNGAG00000009703	Usb1	100	84.015	ENSRROG00000029211	USB1	100	84.074	Rhinopithecus_roxellana
ENSNGAG00000009703	Usb1	100	84.015	ENSSBOG00000029362	USB1	100	84.387	Saimiri_boliviensis_boliviensis
ENSNGAG00000009703	Usb1	81	73.516	ENSSHAG00000006993	USB1	98	68.952	Sarcophilus_harrisii
ENSNGAG00000009703	Usb1	99	53.759	ENSSFOG00015023663	usb1	75	57.500	Scleropages_formosus
ENSNGAG00000009703	Usb1	97	46.739	ENSSMAG00000015834	usb1	99	46.599	Scophthalmus_maximus
ENSNGAG00000009703	Usb1	84	56.195	ENSSDUG00000002949	usb1	99	52.239	Seriola_dumerili
ENSNGAG00000009703	Usb1	83	56.250	ENSSLDG00000014174	usb1	80	56.250	Seriola_lalandi_dorsalis
ENSNGAG00000009703	Usb1	80	68.224	ENSSPUG00000006741	USB1	100	68.224	Sphenodon_punctatus
ENSNGAG00000009703	Usb1	98	48.410	ENSSPAG00000007484	usb1	80	53.304	Stegastes_partitus
ENSNGAG00000009703	Usb1	100	85.874	ENSSSCG00000002807	USB1	100	85.874	Sus_scrofa
ENSNGAG00000009703	Usb1	79	69.340	ENSTGUG00000004792	USB1	99	61.710	Taeniopygia_guttata
ENSNGAG00000009703	Usb1	98	49.071	ENSTRUG00000021069	usb1	99	47.445	Takifugu_rubripes
ENSNGAG00000009703	Usb1	98	47.925	ENSTNIG00000000626	usb1	98	47.348	Tetraodon_nigroviridis
ENSNGAG00000009703	Usb1	86	61.638	ENSTBEG00000001507	USB1	100	61.638	Tupaia_belangeri
ENSNGAG00000009703	Usb1	100	83.643	ENSUAMG00000016823	USB1	100	83.643	Ursus_americanus
ENSNGAG00000009703	Usb1	80	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSNGAG00000009703	Usb1	77	59.903	ENSVPAG00000009834	-	59	87.500	Vicugna_pacos
ENSNGAG00000009703	Usb1	99	85.448	ENSVVUG00000023700	USB1	93	85.892	Vulpes_vulpes
ENSNGAG00000009703	Usb1	81	57.339	ENSXETG00000013795	usb1	89	57.399	Xenopus_tropicalis
ENSNGAG00000009703	Usb1	84	53.947	ENSXMAG00000024687	usb1	80	50.204	Xiphophorus_maculatus