EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000009836 (Gene tree)
Gene ID: 103726675
Gene Symbol: Smg7
Alias: 9430023P16Rik
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 77296 bases
Position: chrKL205464.1:10690058-10767353
Accession: 103726675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000006620	EST1	PF10374.9	6.7e-25	1	1
ENSNGAP00000006612	EST1	PF10374.9	6.7e-25	1	1
ENSNGAP00000006614	EST1	PF10374.9	6.8e-25	1	1
ENSNGAP00000006620	EST1_DNA_bind	PF10373.9	2.6e-56	1	1
ENSNGAP00000006612	EST1_DNA_bind	PF10373.9	2.6e-56	1	1
ENSNGAP00000006614	EST1_DNA_bind	PF10373.9	2.7e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000011855	-	5889	XM_008824296	ENSNGAP00000006614	1147 (aa)	XP_008822518	UPI0004ED09D7
ENSNGAT00000011865	-	3402	-	ENSNGAP00000006620	1133 (aa)	-	-
ENSNGAT00000011849	-	5901	XM_008824295	ENSNGAP00000006612	1135 (aa)	XP_008822517	UPI0004ED0897

Gene Model

Click here to download ENSNGAG00000009836's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000009836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000009836	Smg7	100	96.519	ENSG00000116698	SMG7	100	97.354	Homo_sapiens
ENSNGAG00000009836	Smg7	89	73.802	ENSAPOG00000009611	smg7	95	74.433	Acanthochromis_polyacanthus
ENSNGAG00000009836	Smg7	99	95.745	ENSAMEG00000002357	SMG7	99	95.745	Ailuropoda_melanoleuca
ENSNGAG00000009836	Smg7	97	60.360	ENSACIG00000015152	smg7	100	64.706	Amphilophus_citrinellus
ENSNGAG00000009836	Smg7	100	64.991	ENSAOCG00000013538	smg7	100	66.014	Amphiprion_ocellaris
ENSNGAG00000009836	Smg7	100	64.851	ENSAPEG00000007851	smg7	100	65.787	Amphiprion_percula
ENSNGAG00000009836	Smg7	100	64.492	ENSATEG00000006931	smg7	100	65.596	Anabas_testudineus
ENSNGAG00000009836	Smg7	100	87.664	ENSAPLG00000015811	SMG7	100	88.189	Anas_platyrhynchos
ENSNGAG00000009836	Smg7	99	83.920	ENSACAG00000014989	SMG7	100	83.709	Anolis_carolinensis
ENSNGAG00000009836	Smg7	100	95.427	ENSANAG00000028114	SMG7	100	95.954	Aotus_nancymaae
ENSNGAG00000009836	Smg7	100	65.556	ENSACLG00000022079	smg7	100	65.641	Astatotilapia_calliptera
ENSNGAG00000009836	Smg7	100	67.273	ENSAMXG00000020809	smg7	100	67.647	Astyanax_mexicanus
ENSNGAG00000009836	Smg7	100	94.778	ENSBTAG00000008003	SMG7	100	94.459	Bos_taurus
ENSNGAG00000009836	Smg7	100	96.258	ENSCJAG00000005135	SMG7	100	95.954	Callithrix_jacchus
ENSNGAG00000009836	Smg7	100	95.906	ENSCAFG00000013276	SMG7	98	95.906	Canis_familiaris
ENSNGAG00000009836	Smg7	100	95.906	ENSCAFG00020015475	SMG7	99	95.748	Canis_lupus_dingo
ENSNGAG00000009836	Smg7	99	94.881	ENSCHIG00000018192	SMG7	99	94.881	Capra_hircus
ENSNGAG00000009836	Smg7	100	95.735	ENSTSYG00000002667	SMG7	100	95.427	Carlito_syrichta
ENSNGAG00000009836	Smg7	100	96.341	ENSCPOG00000008906	SMG7	99	96.341	Cavia_porcellus
ENSNGAG00000009836	Smg7	100	96.218	ENSCCAG00000028596	SMG7	100	96.218	Cebus_capucinus
ENSNGAG00000009836	Smg7	100	96.693	ENSCATG00000011063	SMG7	100	96.394	Cercocebus_atys
ENSNGAG00000009836	Smg7	100	95.822	ENSCLAG00000010751	SMG7	100	95.822	Chinchilla_lanigera
ENSNGAG00000009836	Smg7	100	96.519	ENSCSAG00000012654	SMG7	98	96.519	Chlorocebus_sabaeus
ENSNGAG00000009836	Smg7	92	87.011	ENSCHOG00000010522	SMG7	93	87.966	Choloepus_hoffmanni
ENSNGAG00000009836	Smg7	100	89.746	ENSCPBG00000015724	SMG7	100	90.272	Chrysemys_picta_bellii
ENSNGAG00000009836	Smg7	99	96.365	ENSCANG00000015680	SMG7	99	96.365	Colobus_angolensis_palliatus
ENSNGAG00000009836	Smg7	100	96.951	ENSCGRG00001013705	Smg7	100	96.039	Cricetulus_griseus_chok1gshd
ENSNGAG00000009836	Smg7	100	96.951	ENSCGRG00000018401	Smg7	100	96.951	Cricetulus_griseus_crigri
ENSNGAG00000009836	Smg7	95	67.500	ENSCVAG00000011842	smg7	99	67.000	Cyprinodon_variegatus
ENSNGAG00000009836	Smg7	100	66.609	ENSDARG00000060767	smg7	100	66.838	Danio_rerio
ENSNGAG00000009836	Smg7	100	95.735	ENSDORG00000007331	Smg7	100	95.735	Dipodomys_ordii
ENSNGAG00000009836	Smg7	96	93.607	ENSETEG00000002654	SMG7	99	94.434	Echinops_telfairi
ENSNGAG00000009836	Smg7	100	96.258	ENSEASG00005006524	SMG7	99	96.293	Equus_asinus_asinus
ENSNGAG00000009836	Smg7	100	96.171	ENSECAG00000004313	SMG7	98	98.271	Equus_caballus
ENSNGAG00000009836	Smg7	95	94.373	ENSEEUG00000002024	SMG7	92	95.203	Erinaceus_europaeus
ENSNGAG00000009836	Smg7	99	64.745	ENSELUG00000010293	smg7	99	65.639	Esox_lucius
ENSNGAG00000009836	Smg7	100	95.993	ENSFCAG00000010900	SMG7	99	96.628	Felis_catus
ENSNGAG00000009836	Smg7	99	81.841	ENSFALG00000003047	SMG7	100	82.653	Ficedula_albicollis
ENSNGAG00000009836	Smg7	99	96.157	ENSFDAG00000012121	SMG7	99	96.253	Fukomys_damarensis
ENSNGAG00000009836	Smg7	100	63.194	ENSFHEG00000011073	smg7	100	63.706	Fundulus_heteroclitus
ENSNGAG00000009836	Smg7	88	67.006	ENSGMOG00000004916	smg7	92	67.006	Gadus_morhua
ENSNGAG00000009836	Smg7	100	88.112	ENSGALG00000004667	SMG7	100	88.636	Gallus_gallus
ENSNGAG00000009836	Smg7	100	63.404	ENSGAFG00000019000	smg7	100	63.419	Gambusia_affinis
ENSNGAG00000009836	Smg7	96	64.298	ENSGACG00000001634	smg7	99	64.304	Gasterosteus_aculeatus
ENSNGAG00000009836	Smg7	100	96.606	ENSGGOG00000002342	SMG7	100	96.306	Gorilla_gorilla
ENSNGAG00000009836	Smg7	99	64.138	ENSHBUG00000003726	smg7	97	70.619	Haplochromis_burtoni
ENSNGAG00000009836	Smg7	100	95.075	ENSHGLG00000009353	SMG7	100	96.078	Heterocephalus_glaber_female
ENSNGAG00000009836	Smg7	99	88.085	ENSHGLG00100004878	-	99	88.085	Heterocephalus_glaber_male
ENSNGAG00000009836	Smg7	100	95.163	ENSHGLG00100009637	-	100	95.778	Heterocephalus_glaber_male
ENSNGAG00000009836	Smg7	100	67.708	ENSIPUG00000016997	smg7	100	67.993	Ictalurus_punctatus
ENSNGAG00000009836	Smg7	100	96.606	ENSSTOG00000000401	SMG7	100	96.606	Ictidomys_tridecemlineatus
ENSNGAG00000009836	Smg7	99	94.876	ENSJJAG00000012351	Smg7	99	95.495	Jaculus_jaculus
ENSNGAG00000009836	Smg7	97	60.789	ENSKMAG00000004900	smg7	97	67.500	Kryptolebias_marmoratus
ENSNGAG00000009836	Smg7	99	65.229	ENSLBEG00000002983	smg7	99	65.746	Labrus_bergylta
ENSNGAG00000009836	Smg7	52	62.667	ENSLBEG00000005220	-	75	64.273	Labrus_bergylta
ENSNGAG00000009836	Smg7	100	74.762	ENSLACG00000000972	SMG7	100	75.108	Latimeria_chalumnae
ENSNGAG00000009836	Smg7	99	67.057	ENSLOCG00000002010	smg7	99	67.642	Lepisosteus_oculatus
ENSNGAG00000009836	Smg7	100	95.648	ENSLAFG00000008186	SMG7	100	95.648	Loxodonta_africana
ENSNGAG00000009836	Smg7	100	96.606	ENSMFAG00000031653	SMG7	99	96.558	Macaca_fascicularis
ENSNGAG00000009836	Smg7	100	96.693	ENSMMUG00000018458	SMG7	98	96.693	Macaca_mulatta
ENSNGAG00000009836	Smg7	100	96.394	ENSMNEG00000034798	SMG7	100	96.394	Macaca_nemestrina
ENSNGAG00000009836	Smg7	100	96.693	ENSMLEG00000037170	SMG7	100	96.394	Mandrillus_leucophaeus
ENSNGAG00000009836	Smg7	88	63.969	ENSMAMG00000018733	smg7	85	64.417	Mastacembelus_armatus
ENSNGAG00000009836	Smg7	100	65.417	ENSMZEG00005015247	smg7	100	65.641	Maylandia_zebra
ENSNGAG00000009836	Smg7	97	87.960	ENSMGAG00000001561	SMG7	98	88.500	Meleagris_gallopavo
ENSNGAG00000009836	Smg7	100	97.125	ENSMAUG00000019484	Smg7	100	97.125	Mesocricetus_auratus
ENSNGAG00000009836	Smg7	100	96.603	ENSMICG00000007145	SMG7	100	96.603	Microcebus_murinus
ENSNGAG00000009836	Smg7	100	97.038	ENSMOCG00000020748	Smg7	100	97.038	Microtus_ochrogaster
ENSNGAG00000009836	Smg7	99	63.573	ENSMMOG00000001524	smg7	99	64.118	Mola_mola
ENSNGAG00000009836	Smg7	92	91.366	ENSMODG00000007139	SMG7	99	92.030	Monodelphis_domestica
ENSNGAG00000009836	Smg7	100	64.500	ENSMALG00000000061	smg7	93	65.672	Monopterus_albus
ENSNGAG00000009836	Smg7	100	97.038	MGP_CAROLIEiJ_G0014704	Smg7	100	97.038	Mus_caroli
ENSNGAG00000009836	Smg7	100	96.951	ENSMUSG00000042772	Smg7	100	96.951	Mus_musculus
ENSNGAG00000009836	Smg7	100	96.951	MGP_PahariEiJ_G0027940	Smg7	100	96.951	Mus_pahari
ENSNGAG00000009836	Smg7	100	97.038	MGP_SPRETEiJ_G0015511	Smg7	100	97.038	Mus_spretus
ENSNGAG00000009836	Smg7	99	95.800	ENSMPUG00000011732	SMG7	97	95.897	Mustela_putorius_furo
ENSNGAG00000009836	Smg7	99	95.234	ENSMLUG00000015417	SMG7	99	95.234	Myotis_lucifugus
ENSNGAG00000009836	Smg7	98	61.067	ENSNBRG00000024343	smg7	99	68.720	Neolamprologus_brichardi
ENSNGAG00000009836	Smg7	100	96.693	ENSNLEG00000018018	SMG7	100	96.394	Nomascus_leucogenys
ENSNGAG00000009836	Smg7	77	85.573	ENSMEUG00000004681	SMG7	73	91.870	Notamacropus_eugenii
ENSNGAG00000009836	Smg7	96	83.181	ENSOPRG00000013942	SMG7	96	84.095	Ochotona_princeps
ENSNGAG00000009836	Smg7	100	96.084	ENSODEG00000010390	SMG7	100	96.084	Octodon_degus
ENSNGAG00000009836	Smg7	100	65.162	ENSONIG00000000277	smg7	100	65.247	Oreochromis_niloticus
ENSNGAG00000009836	Smg7	99	90.311	ENSOANG00000000994	SMG7	100	90.869	Ornithorhynchus_anatinus
ENSNGAG00000009836	Smg7	100	88.860	ENSOCUG00000005887	SMG7	94	89.295	Oryctolagus_cuniculus
ENSNGAG00000009836	Smg7	100	63.199	ENSORLG00000007314	smg7	100	63.543	Oryzias_latipes
ENSNGAG00000009836	Smg7	100	63.543	ENSORLG00020015779	smg7	100	63.887	Oryzias_latipes_hni
ENSNGAG00000009836	Smg7	100	63.668	ENSORLG00015012289	smg7	100	63.496	Oryzias_latipes_hsok
ENSNGAG00000009836	Smg7	100	62.205	ENSOMEG00000002328	smg7	100	62.310	Oryzias_melastigma
ENSNGAG00000009836	Smg7	96	95.521	ENSOGAG00000003107	SMG7	93	96.164	Otolemur_garnettii
ENSNGAG00000009836	Smg7	100	94.952	ENSOARG00000001352	SMG7	98	94.952	Ovis_aries
ENSNGAG00000009836	Smg7	100	96.394	ENSPPAG00000031619	SMG7	100	96.394	Pan_paniscus
ENSNGAG00000009836	Smg7	100	96.167	ENSPPRG00000011222	SMG7	100	96.039	Panthera_pardus
ENSNGAG00000009836	Smg7	96	95.338	ENSPTIG00000007242	SMG7	100	92.308	Panthera_tigris_altaica
ENSNGAG00000009836	Smg7	100	96.394	ENSPTRG00000001764	SMG7	100	96.394	Pan_troglodytes
ENSNGAG00000009836	Smg7	100	96.693	ENSPANG00000004520	SMG7	100	96.394	Papio_anubis
ENSNGAG00000009836	Smg7	99	64.851	ENSPKIG00000007242	smg7	99	67.500	Paramormyrops_kingsleyae
ENSNGAG00000009836	Smg7	99	90.009	ENSPSIG00000012201	SMG7	99	90.237	Pelodiscus_sinensis
ENSNGAG00000009836	Smg7	71	43.262	ENSPMGG00000021833	smg7	89	55.500	Periophthalmus_magnuspinnatus
ENSNGAG00000009836	Smg7	100	95.383	ENSPEMG00000011315	Smg7	100	95.993	Peromyscus_maniculatus_bairdii
ENSNGAG00000009836	Smg7	100	91.828	ENSPCIG00000003786	SMG7	100	92.355	Phascolarctos_cinereus
ENSNGAG00000009836	Smg7	100	60.475	ENSPFOG00000019219	smg7	99	62.058	Poecilia_formosa
ENSNGAG00000009836	Smg7	100	63.225	ENSPLAG00000001446	smg7	100	63.652	Poecilia_latipinna
ENSNGAG00000009836	Smg7	97	62.467	ENSPMEG00000005218	smg7	99	62.907	Poecilia_mexicana
ENSNGAG00000009836	Smg7	87	60.627	ENSPREG00000019039	smg7	91	61.193	Poecilia_reticulata
ENSNGAG00000009836	Smg7	100	96.482	ENSPPYG00000000427	SMG7	100	96.482	Pongo_abelii
ENSNGAG00000009836	Smg7	95	84.041	ENSPCAG00000008360	SMG7	94	84.225	Procavia_capensis
ENSNGAG00000009836	Smg7	100	96.603	ENSPCOG00000011996	SMG7	98	96.603	Propithecus_coquereli
ENSNGAG00000009836	Smg7	92	88.910	ENSPVAG00000000851	SMG7	89	90.288	Pteropus_vampyrus
ENSNGAG00000009836	Smg7	100	65.497	ENSPNYG00000007643	smg7	100	65.411	Pundamilia_nyererei
ENSNGAG00000009836	Smg7	100	67.328	ENSPNAG00000011374	smg7	100	67.241	Pygocentrus_nattereri
ENSNGAG00000009836	Smg7	100	96.780	ENSRNOG00000027962	Smg7	100	97.086	Rattus_norvegicus
ENSNGAG00000009836	Smg7	100	96.606	ENSRBIG00000036316	SMG7	100	96.306	Rhinopithecus_bieti
ENSNGAG00000009836	Smg7	100	96.606	ENSRROG00000035719	SMG7	100	96.306	Rhinopithecus_roxellana
ENSNGAG00000009836	Smg7	99	95.587	ENSSBOG00000023454	SMG7	99	96.117	Saimiri_boliviensis_boliviensis
ENSNGAG00000009836	Smg7	100	91.747	ENSSHAG00000013147	SMG7	99	92.668	Sarcophilus_harrisii
ENSNGAG00000009836	Smg7	100	69.478	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSNGAG00000009836	Smg7	100	65.090	ENSSMAG00000006067	smg7	100	65.837	Scophthalmus_maximus
ENSNGAG00000009836	Smg7	95	71.627	ENSSDUG00000017543	smg7	100	65.152	Seriola_dumerili
ENSNGAG00000009836	Smg7	99	88.251	ENSSPUG00000002064	SMG7	99	88.693	Sphenodon_punctatus
ENSNGAG00000009836	Smg7	99	65.887	ENSSPAG00000008733	smg7	99	65.887	Stegastes_partitus
ENSNGAG00000009836	Smg7	100	95.997	ENSSSCG00000015558	SMG7	99	96.028	Sus_scrofa
ENSNGAG00000009836	Smg7	99	87.753	ENSTGUG00000003928	SMG7	100	88.370	Taeniopygia_guttata
ENSNGAG00000009836	Smg7	99	63.224	ENSTNIG00000002802	smg7	99	63.056	Tetraodon_nigroviridis
ENSNGAG00000009836	Smg7	76	92.373	ENSTBEG00000003220	SMG7	75	92.489	Tupaia_belangeri
ENSNGAG00000009836	Smg7	96	94.886	ENSTTRG00000014778	SMG7	94	95.799	Tursiops_truncatus
ENSNGAG00000009836	Smg7	97	91.712	ENSUAMG00000017473	SMG7	100	92.048	Ursus_americanus
ENSNGAG00000009836	Smg7	97	96.084	ENSUMAG00000016389	SMG7	100	96.084	Ursus_maritimus
ENSNGAG00000009836	Smg7	100	95.993	ENSVVUG00000008976	SMG7	99	96.512	Vulpes_vulpes
ENSNGAG00000009836	Smg7	100	70.675	ENSXETG00000012528	smg7	100	70.338	Xenopus_tropicalis
ENSNGAG00000009836	Smg7	100	63.590	ENSXMAG00000007123	smg7	100	63.846	Xiphophorus_maculatus